Mapping Dicorynia guianensis Amsh. wood constituents by submicron resolution cluster‐TOF‐SIMS imaging

The preparation of tropical wood surface sections for time‐of‐flight secondary ion mass spectrometry imaging is described, and the use of delayed extraction of secondary ions and its interest for the analysis of vegetal surface are shown. The method has been applied to the study by time‐of‐flight secondary ion mass spectrometry imaging with a resolution of less than one micron of a tropical wood species, Dicorynia guianensis, which is one of the most exploited wood in French Guiana for its durable heartwood. The heartwood of this species exhibits an economical importance, but its production is not controlled in forestry. Results show an increase of tryptamine from the transition zone and a concomitant decrease of inorganic ions and starch fragment ions. These experiments lead to a better understanding of the heartwood formation and the origin of the natural durability of D. guianensis. Copyright © 2016 John Wiley & Sons, Ltd.     

Synthesis and surface properties of new semi-fluorinated sulfobetaines potentially usable for 2D-electrophoresis

New semi-fluorinated amidosulfobetaines, homologs of hydrocarbon amidosulfobetaines (ASB) commonly used in two-dimensional gel electrophoresis (2DE), were prepared in three steps from 2-F-alkylethyl iodide or F-alkyl iodide. Their synthesis was described and their air-water interface properties were investigated and compared with their perhydrogenated counterpart properties. The influence of the relative lengths of the perfluorinated and hydocarbonated moieties was discussed. 2DE of a rat testicular membrane fraction was performed comparatively using one of these fluorinated sulfobetaines and its hydrocarbon homolog; these preliminary results showed the great potential of the semi-fluorinated sulfobetaines in proteomic analysis.     

Group-theoretical approach to the investigation of reaction graphs for highly degenerate rearrangements of chemical compounds I. Criterion of the connectivity of a graph

We give a necessary and sufficient condition for a reaction graph of a degenerate rearrangement to be connected. This condition is formulated in terms of vertex stabilizers of the automorphism group of a molecular graph. The condition is illustrated on several examples, including the reaction graph of bullvalene. We consider different mathematical models for the construction of reaction graphs and state the problem: which of the models is more adequate?     

Investigation of the formation of poly(ethylene terephthalate) with model molecules. IV. Catalysis of the esterification of ethylene glycol with benzoic acid and of the condensation of ethylene glycol monobenzoate

The esterfication of ethylene glycol (EG) with benzoic acid (BA) is an acid-catalyzed reaction which leads, as a first intermediate, to ethylene glycol monobenzoate (EGMB). This compound has an ? OH group which is more active towards carboxylic groups than the first ? OH group of EG. Moreover, it is a key intermediate in the formation of sideproducts containing diethylene glycol (DEG) moieties. The condensation reaction of EGMB was particularly studied in the presence of carboxylic acids or metal derivatives as catalysts. Titanium is the most active. Sb, which is widely used in the industrial synthesis of PET, needs to be present at a high level of concentration to show an activity. The presence of carboxylic groups in the reaction medium does not affect its activity, but it is necessary to remove the ethylene glycol as soon as it is formed in order to keep it active during the condensation reaction.     

Living anionic homo- and block copolymerization of 2-(tert-butylamino)ethyl methacrylate

Anionic polymerization of 2-(tert-butylamino)ethyl methacrylate (tBAEMA), which bears an unprotected secondary amine moiety, has been investigated in THF at −78°C. The presence of lithium chloride has been shown to be desirable to afford narrow molecular weight distribution as well as a good agreement between theoretical and observed molecular weight. The living character of the polymerization has also been demonstrated, and the synthesis of block copolymers carried out successfully. They have been analyzed by SEC by adding a mixture of secondary and tertiary amines to the eluent (THF) so as to avoid any polymer adsorption during elution. © 1997 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 35 : 2035–2040, 1997     

Gradient‐based solvent suppression methods on a benchtop spectrometer

Benchtop NMR emerges as an appealing alternative to widely extend the scope of NMR spectroscopy in harsh environments and for on‐line monitoring. Obviously, the use of low‐field magnets induces a dramatic reduction of the spectral resolution leading to frequent peak overlaps. This issue is even more serious because applications such as chemical process monitoring involve the use of non‐deuterated solvents, leading to intense and broad peaks overlapping with the signals of interest. In this article, we highlight the need for efficient suppression methods compatible with flowing samples, which is not the case of the common pre‐saturation approaches. Thanks to a gradient coil included in our benchtop spectrometer, we were able to implement modern and efficient solvent suppression blocks such as WET or excitation sculpting to deliver quantitative spectra in the conditions of the on‐line monitoring. While these methods are commonly used at high field, this is the first time that they are investigated on a benchtop setting. Their analytical performance is evaluated and compared under static and on‐flow conditions. The results demonstrate the superiority of gradient‐based methods, thus highlighting the relevance of implementing this device on benchtop spectrometers. The comparison of major solvent suppression methods reveals an optimum performance for the WET‐180‐NOESY experiment, both under static and on‐flow conditions. Copyright © 2016 John Wiley & Sons, Ltd.     

Templated Synthesis and Assembly of Two-, Three- and Six-Patch Silica Nanoparticles with a Controlled Patch-to-Particle Size Ratio

We report a fabrication route of silica nanoparticles with two, three or six patches with an easily tunable patch-to-particle size ratio. The synthetic pathway includes two main stages: the synthesis of silica/polystyrene multipod-like templates and the selective growth of their silica core through an iterative approach. Electron microscopy of the dimpled nanoparticles obtained after dissolution of the polystyrene nodules of the multipod-like nanoparticles provides evidence of the conformational growth of the silica core. Thanks to the presence of some polymer chains, which remained grafted at the bottom of the dimples after the dissolution of the PS nodules, the solvent-induced assembly of the patchy nanoparticles is performed. Chains, hexagonal suprastructures and cubic lattices are obtained from the assembly of two-, three- and six-patch silica nanoparticles, respectively. Our study can guide future work in both patchy nanoparticle synthesis and self-assembly. It also opens new routes towards the fabrication of specific classes of one-, two- and three-dimensional colloidal lattices, including complex tilings.     

Evaluation of ion mobility in capillary electrophoresis coupled to mass spectrometry for the identification in metabolomics

Currently, feature annotation remains one of the main challenges in untargeted metabolomics. In this context, the information provided by high-resolution mass spectrometry (HRMS) in addition to accurate mass can improve the quality of metabolite annotation, and MS/MS fragmentation patterns are widely used. Accurate mass and a separation index, such as retention time or effective mobility (μ_eff), in chromatographic and electrophoretic approaches, respectively, must be used for unequivocal metabolite identification. The possibility of measuring collision cross-section (CCS) values by using ion mobility (IM) is becoming increasingly popular in metabolomic studies thanks to the new generation of IM mass spectrometers. Based on their similar separation mechanisms involving electric field and the size of the compounds, the complementarity of ^DTCCS_N2 and μ_eff needs to be evaluated. In this study, a comparison of ^DTCCS_N2 and μ_eff was achieved in the context of feature identification ability in untargeted metabolomics by capillary zone electrophoresis (CZE) coupled with HRMS. This study confirms the high correlation of ^DTCCS_N2 with the mass of the studied metabolites as well as the orthogonality between accurate mass and μ_eff, making this combination particularly interesting for the identification of several endogenous metabolites. The use of IM-MS remains of great interest for facilitating the annotation of neutral metabolites present in the electroosmotic flow (EOF) that are poorly or not separated by CZE.     

Vanishing evaluations of simple functors

The classification of simple biset functors is known, but the evaluation of a simple biset functor at a finite group G$G$ may be zero. We investigate various situations where this happens, as well as cases where this does not occur. We also prove a closed formula for such an evaluation under some restrictive conditions on  G$G$.     

Preconditioning and globalizing conjugate gradients in dual space for quadratically penalized nonlinear-least squares problems

When solving nonlinear least-squares problems, it is often useful to regularize the problem using a quadratic term, a practice which is especially common in applications arising in inverse calculations. A solution method derived from a trust-region Gauss-Newton algorithm is analyzed for such applications, where, contrary to the standard algorithm, the least-squares subproblem solved at each iteration of the method is rewritten as a quadratic minimization subject to linear equality constraints. This allows the exploitation of duality properties of the associated linearized problems. This paper considers a recent conjugate-gradient-like method which performs the quadratic minimization in the dual space and produces, in exact arithmetic, the same iterates as those produced by a standard conjugate-gradients method in the primal space. This dual algorithm is computationally interesting whenever the dimension of the dual space is significantly smaller than that of the primal space, yielding gains in terms of both memory usage and computational cost. The relation between this dual space solver and PSAS (Physical-space Statistical Analysis System), another well-known dual space technique used in data assimilation problems, is explained. The use of an effective preconditioning technique is proposed and refined convergence bounds derived, which results in a practical solution method. Finally, stopping rules adequate for a trust-region solver are proposed in the dual space, providing iterates that are equivalent to those obtained with a Steihaug-Toint truncated conjugate-gradient method in the primal space.