Insight into the solvent effect on the structure,IR-spectrum,and hyperpolarizability of CpMe<Subscript>2</Subscript>Ta(benzyne), a mononuclear Tantalum–benzyne complex

In this investigation, quantum chemical calculations using MPW1PW91 method were applied to analyze of the solvent effect on the structural, vibrational analysis, thermochemical parameters and first hyperpolarizability for CpMe₂Ta(benzyne) complex. The solvent effects on the structure and properties were examined by the self-consistent reaction field theory (SCRF) based on Polarizable Continuum Model (PCM). Good correlations exist between these parameters and dielectric constants of solvents. The wavenumbers of the IR-active symmetric stretching vibrations of Ta-Me in different solvents were correlated with the Kirkwood–Bauer–Magat equation (KBM). In addition, Monte Carlo simulations using standard procedure of Metropolis sampling were applied to investigate of the solvation of CpMe₂Ta(benzyne) complex. In addition, the bonding interaction between the CpTaMe₂ and benzyne fragments was analyzed by means of the energy decomposition analysis (EDA).     

Evaluation of the reaction mechanism for photocatalytic degradation of organic pollutants with MIL-88A/BiOI structure under visible light irradiation

Research on Chemical Intermediates - In this study, we synthesized novel visible light photocatalyst MIL-88A/BiOI using depositing BiOI particles on the surface of a metal–organic framework...     

Sodium Butylated Hydroxytoluene (NaBHT) as a New and Efficient Hydride Source for Pd-Catalysed Reduction Reactions

NaBHT (sodium butylated hydroxytoluene), a hindered and soluble base for the efficient arylation of various base-sensitive amines and (hetero)aryl halides has been found to have an unanticipated role as a hydride donor to reduce (hetero)aryl halides and allylic acetates. Mechanistic studies have uncovered that NaBHT, but not BHT, can deliver multiple hydrides through oxidation of the benzylic methyl group in NaBHT to the aldehyde. Further, performing the reduction with NaBHT-d₂₀ has revealed that the redox-active benzylic position is not the only hydride donor site from NaBHT with one hydride in three coming, presumably, from the tert-butyl groups. The reduction works well under mild conditions and, incredibly, only consumes 20 percent of the NaBHT in the process; the remaining 80 percent can be readily recovered in pure form and reused. This, combined with the low cost of the material in ton-scale quantity, makes it practical and attractive for wider use in industry at scale.     

Photophysical Properties and Kinetic Studies of 2-Vinylpyridine-Based Cycloplatinated(II) Complexes Containing Various Phosphine Ligands

A series of cycloplatinated(II) complexes with general formula of [PtMe(Vpy)(PR₃)], Vpy = 2-vinylpyridine and PR₃ = PPh₃ (1a); PPh₂Me (1b); PPhMe₂ (1c), were synthesized and characterized by means of spectroscopic methods. These cycloplatinated(II) complexes were luminescent at room temperature in the yellow–orange region’s structured bands. The PPhMe₂ derivative was the strongest emissive among the complexes, and the complex with PPh₃ was the weakest one. Similar to many luminescent cycloplatinated(II) complexes, the emission was mainly localized on the Vpy cyclometalated ligand as the main chromophoric moiety. The present cycloplatinated(II) complexes were oxidatively reacted with MeI to yield the corresponding cycloplatinated(IV) complexes. The kinetic studies of the reaction point out to an S_N2 mechanism. The complex with PPhMe₂ ligand exhibited the fastest oxidative addition reaction due to the most electron-rich Pt(II) center in its structure, whereas the PPh₃ derivative showed the slowest one. Interestingly, for the PPhMe₂ analog, the trans isomer was stable and could be isolated as both kinetic and thermodynamic product, while the other two underwent trans to cis isomerization.     

A Hamilton–Jacobi method to describe the evolutionary equilibria in heterogeneous environments and with non-vanishing effects of mutations

In this note, we characterize the solution to a system of elliptic integro-differential equations describing a phenotypically structured population subject to mutation, selection, and migration. Generalizing an approach based on the Hamilton–Jacobi equations, we identify the dominant terms of the solution when the mutation term is small (but nonzero). This method was initially used, for different problems arisen from evolutionary biology, to identify the asymptotic solutions, while the mutations vanish, as a sum of Dirac masses. A key point is a uniqueness property related to the weak KAM theory. This method allows us to go further than the Gaussian approximation commonly used by biologists, and is an attempt to fill the gap between the theories of adaptive dynamics and quantitative genetics.     

Structural and functional analysis of a novel psychrophilic β-mannanase from Glaciozyma antarctica PI12

The structure of a novel psychrophilic β-mannanase enzyme from Glaciozyma antarctica PI12 yeast has been modelled and analysed in detail. To our knowledge, this is the first attempt to model a psychrophilic β-mannanase from yeast. To this end, a 3D structure of the enzyme was first predicted using a threading method because of the low sequence identity (<30 %) using MODELLER9v12 and simulated using GROMACS at varying low temperatures for structure refinement. Comparisons with mesophilic and thermophilic mannanases revealed that the psychrophilic mannanase contains longer loops and shorter helices, increases in the number of aromatic and hydrophobic residues, reductions in the number of hydrogen bonds and salt bridges and numerous amino acid substitutions on the surface that increased the flexibility and its efficiency for catalytic reactions at low temperatures.     

Theoretical Study of the Interactions between Isolated <Emphasis Type="Italic">DNA</Emphasis> Bases and Various Groups IA and IIA Metal Ions by <Emphasis Type="Italic">Ab Initio</Emphasis> Calculations

Summary. Interactions of the DNA bases adenine (A), guanine (G), cytosine (C), and thymine (T) with various metal ions (M) of groups IA and IIA of the periodic table of the elements were studied at the HF, MP2, and DFT levels of theory. The structures and thermodynamic stabilities of these species were studied at the gas phase. The calculations uphold that there exist two active sites in G and one in A, C, and T. The calculations also show that the O² atom in T is a more active site for metal ion bindings than that in C. The stability energies for G … M complexes are larger than those for A … M complexes and the stability energies for T … M complexes are larger than those for C … M complexes. As z/r ratio for the metal ion increases, the interaction energy for the complex increases systematically. Thermodynamic quantities such as ΔH, ΔG, ΔS, and ln K were determined for each complexation reaction, [Base+M ⁿ⁺ →(Base … M) ⁿ⁺]. A, G, and C complexation reactions except for C … Rb⁺ are exothermic. The situation is quite different for T complexation reactions and all except for T … Be²⁺ and T … Mg²⁺ are endothermic.     

Prediction of Density,Surface Tension,and Viscosity of Quaternary Ammonium-Based Ionic Liquids ([N222(n)]Tf2N) by Means of Artificial Intelligence Techniques

In this work, thermophysical properties of quaternary ammonium-based ionic liquids (ILs) including density, surface tension, and viscosity are produced by two powerful artificial intelligence techniques: genetic function approximation (GFA) and artificial neural network (ANN). In proposed GFA and ANN models, the critical temperature and water content of studied ILs ([N_222(n)]Tf₂N with n = 5, 6, 8, 10, and 12) as well as operation temperature were given as the input parameters and the density, surface tension, and viscosity were predicted as the output results. The obtained results reveal that the selected input parameters are appropriate for prediction of thermophysical properties of quaternary ammonium-based ILs. In addition, the high statistical quality represented by various criteria and the low prediction errors of the presented models indicate that they can accurately predict the density, surface tension, and viscosity of new ILs without recourse to experimental data.     

Vibrations of a chelated proton in a protonated tertiary diamine

Vibrational spectra of the conjugate acid of Me(2)NCH(2)CH(2)CH(2)CH(2)NMe(2) (N,N,N',N'-tetramethylputrescine) have been examined in the gaseous and crystalline phases using Infrared Multiple Photon Dissociation (IRMPD) spectroscopy, Inelastic Neutron Scattering (INS), and high pressure Raman spectroscopy. A band observed near 530 cm(-1) is assigned to the asymmetric stretch of the bridging proton between the two nitrogens, based on deuterium substitution and pressure dependence. The NN distance measured by X-ray crystallography gives a good match to DFT calculations, and the experimental band position agrees with the value predicted from theory using a 2-dimensional potential energy surface. The reduced dimensionality potential energy surface, which treats the ion as though it possesses a linear NHN geometry, shows low barriers to proton transit from one nitrogen to the other, with zero point levels close to the barrier tops. In contrast, two other related systems containing strong hydrogen bonds do not exhibit the same spectroscopic signature of a low barrier hydrogen bond (LBHB). On the one hand, the IRMPD spectra of the conjugate acid ions of the amino acid N,N,N',N'-tetramethylornithine (in which the two nitrogens have different basicities) show fewer bands and no comparable isotopic shifts in the low frequency domain. On the other hand, the IRMPD spectrum of the shorter homologue Me(2)NCH(2)CH(2)CH(2)NMe(2) (N,N,N',N'-tetramethyl-1,3-propanediamine), for which the NHN bond angle deviates substantially from linearity, displays more than one band in the 1100-1400 cm(-1) domain, which vanish as a consequence of deuteration.