Donor-acceptor distance-dependence of photoinduced electron-transfer rate in flavoproteins

Ultrafast fluorescence quenching of flavin in flavodoxin from Megasphaera elsdenii was investigated by means of a fluorescence up-conversion method. Fluorescence lifetimes of flavodoxin from M. elsdenii were estimated to be tau(1) approximately 165 fs (0.97%) and tau(2) approximately 10 ps (0.03%). Correlation of photoinduced electron-transfer rates (k(ET)) with averaged distances (D(av)) between isoalloxazine and nearby tryptophan or tyrosine was examined and obtained an empirical equation of ln k(ET) vs D(av) by means of a nonlinear least-squares method using reported data together with flavodoxin from M. elsdenii. The values of D(av) were calculated from X-ray structures of the flavoproteins. The ln k(ET) was approximately linear at D(av) shorter than 7 A. The model free empirical equation was expressed as ln k(ET) = 29.7 + (-0.327 D(av) + 2.84 x 10(-5))/(0.698 - D(av)(2)). We also analyzed the observed values of ln k(ET) with Marcus theory, but could not obtain reasonable results. Our analysis suggests that the average distance, rather than the shortest (edge to edge) distance or interplanar angles between the aromatics rings, is the key factor in the process of the photoinduced electron transfer in these flavoproteins.     

Dry and wet prolines for asymmetric organic solvent-free aldehyde-aldehyde and aldehyde-ketone aldol reactions

Dry and wet prolines were found to catalyze the direct aldol reactions of aldehyde-aldehyde and aldehyde-ketone, respectively, to afford aldols with excellent diastereo- and enantioselectivities, and an organic solvent-free reaction was realized in some cases.     

Small organic molecule in enantioselective, direct aldol reaction "in water"

A small organic molecule, Pro-NH(2), catalyzing the enantioselective aldol reaction "in water" not merely "in the presence of water" with good enantioselectivity has been discovered for the first time.     

Odd-even effect and metal induced structural convergence in self-assembled monolayers of bipyridine derivatives

Scanning tunneling microscopy (STM) observations reveal that bipyridine derivatives which exhibit various two-dimensional structures due to the odd-even chain length effect are converged into a lamellar structure upon metal coordination.     

Highly diastereo- and enantioselective direct aldol reactions of aldehydes and ketones catalyzed by siloxyproline in the presence of water

Proline-based organocatalysts have been developed for a highly enantioselective, direct aldol reaction of aldehydes and ketones in the presence of water. While several surfactant-proline combined catalysts have proved effective, proline derivatives with a hydrophobic moiety such as trans-siloxy-L-proline and cis-siloxy-D-proline, both of which are easily prepared from the same commercially available 4-hydroxy-L-proline, have been found to be the most effective organocatalysts examined in this study, affording the aldol product with excellent diastereo- and enantioselectivities, these two catalysts generating opposite enantiomers. Water affects the selectivity, and poor results are obtained under neat reaction conditions or in dry organic solvents. More than three equivalents of water are required for the best diastereo- and enantioselectivities, while three equivalents is the recommended amount from a synthetic point of view. The reaction proceeds in the organic phase, and also proceeds in the presence of a large amount of water. The large-scale preparation of aldols with the minimal use of an organic solvent, including in the purification step, is described.     

Metal patterning on silicon surface by site-selective electroless deposition through colloidal crystal templating

Site-selective Cu deposition on a Si substrate was achieved by a combination of colloidal crystal templating, hydrophobic treatment, and electroless plating. Uniformly sized nano/microstructures were produced on the substrate using a monolayer coating of colloidal spheres instead of a conventional resist. The Cu patterns obtained were of two different types: networklike honeycomb and isolated-island patterns with a minimum period of 200 nm. Each ordered pattern with the desired intervals was composed of clusters of Cu nanoparticles with a size range of 50-100 nm. By the present method, it is possible to control the periodicity of metal arrays by changing the diameter of the colloidal spheres used as an initial mask and to adjust the shape of the metal patterns by changing the mask structure for electroless plating.     

Furopyridines. XXX. Synthesis and reaction of difuro[3,2-c:- 3′,2′-e]pyridine,a new tricyclic heterocycle

Difuro[3,2-c:3′,2′-e]pyridine 1 , a new tricyclic heteroaromatic, has been prepared for the first time. Bromination of 1 with molecular bromine gave 3-bromo 7 , 8-bromo 7′ and 3,8-dibromo derivative 8 ; nitration with fuming nitric acid yielded 2-nitro compound 9 , while nitration with a mixture of fuming nitric acid and sulfuric acid gave 2,7-dinitro derivative 10 ; formylation with n-butyllithium and dimethylformamide gave 2-formyl 11 , 7-formyl 11′ , and 2,7-diformyl compound 12. The N-oxide 14 of 1 afforded 4-cyano compound 15 by cyanation with trimethylsilyl cyanide, 4-chloro compound 16 by chlorination with phosphorus oxychloride, and 4-acetoxyl compound 17 by acetoxylation with acetic anhydride.     

Cover Picture

The cover picture shows how protein matrices can regulate the spatial arrangement and orientation of a heme-based donor (Zn-heme: ZnPP)-sensitizer (Ru²⁺(bpy)₃)-acceptor (cyclic viologen: BXV⁴⁺) triad. A U-shape conformation of the triad without protein matrix changes into a triangle arrangement by incorporation into apocytochrome b₅₆₂ (Cyt-b₅₆₂), or into a further extended conformation by apomyoglobin (Mb) matrix. The electron transfer pathways and the lifetimes of the photoinduced charge-separated states were remarkably affected by the protein wrapping effect.