A configuration interaction study of phosphine using bonded functions

A computational study is made of the effect of basis set upon the energy, properties and inversion barrier of the phosphine molecule. The calculations are performed at both the SCF and CI level. The flexibility of the double zeta basis is discussed in the light of the results.     

Silicon-Directed Nazarov Reactions II. Preparation and Cyclization of β-Silyl-substituted Divinyl Ketones

Two general methods for the preparation of β-silyl-substituted divinyl ketones have been developed starting from either α, β-unsaturated aldehydes or simple ketones. Anhydrous FeCl₃ induces the cyclization to cyclopentenones under mild conditions and in good yields with predictable and complete control over the position of the double bond in the five-membered ring. The observed effects of substituents on rate can be explained by a rate-determining cationic electrocyclization. Silyl substitution has been shown to retard the reaction.     

Effects of concentrated matrices on the determination of trace levels of platinum and gold in aqueous samples using solvent extraction—Zeeman effect graphite furnace atomic absorption spectrometry and inductively coupled plasma—mass spectrometry

Two methods of determining trace levels of platinum and gold in aqueous solutions with high concents of total dissolved solids were investigated. The first involves preconcentration and separation of the precious metals from the interfering matrix by solvent extraction, followed by graphite furnace atomic absorption spectrometry (GFAAS) with Zeeman effect background correction. The direct determination of Pt and Au in solutions of high ionic strength by GFAAS is not desirable because of interference between elements in the matrix and the analyte, increased imprecision of analysis, greatly increased background absorbance leading to increased detection limits and rapid deterioration of the graphite tube. All the extraction methods for gold examined in this study resulted in decreased imprecision, increased sensitivity and lower background absorbance compared with direct measurements on the aqueous solution. All techniques also exhibited good recoveries (> 8%) and reproducibilities (relative standard deviation < 10%). The highest sensitivities for gold extraction from distilled water were obtained for dibutyl sulfide (DBS)—toluene and the lowest for cyanide—dibutyl ketone. The degree of extraction of Au was, however, dependent on the composition of the solution, indicating that standard and sample matrices should be closely matched even when employing solvent extraction. Solvent extraction was generally less successful for Pt. In order to obtain an acceptable imprecision in the Pt extractions, it was found that the use of SnCl₂ as a labilizing agent is essential for most of the techniques investigated.The second method was direct measurement by inductively coupled plasma mass spectrometry (ICP—MS). ICP—MS offers the advantages of a very low detection limit (100 ng l^?1 or better) without preconcentration and a large dynamic range. However, severe matrix effects can occur in concentrated solutions. Whereas high concentrations in solution of both sodium perchlorate and sodium chloride decrease the sensitivity, the presence of sulfide and natural organic (fulvic) acid increase the sensitivity for Pt and Au by a factor of up to 4. Sulfate, on the other hand, decreases the sensitivity of ICP-MS for Pt. The method of standard additions or isotope dilution is recommended for routine use to circumvent this problem, especially when the nature of the matrix is unknown or cannot be easily matched in the standards.     

Oligodeoxyfluorosides: Strong Sequence Dependence of Fluorescence Emission

We describe the properties of a series of oligomeric polyfluorophores assembled on the DNA backbone. The 11 oligomers (oligodeoxyfluorosides, ODFs), 4-7 monomers in length, were composed of only two fluorescent monomers and a spacer in varied sequences, and were designed to test how fluorescent nucleobases can interact electronically to yield complexity in fluorescence emission. The monomer fluorophores were deoxyribosides of pyrene and perylene, which emit light in violet and blue wavelengths, respectively. The experiments show that simple variation in sequence and spacing can dramatically change fluorescence, yielding emission maxima ranging from 380 to 557 nm and visible colors from violet to orange-red. Fluorescence lifetime data, excitation spectra, and absorption data point to a number of multi-fluorophore electronic interactions, including pyrene-pyrene and perylene-perylene excimers, pyrene-perylene exciplexes, as well as monomer dye emissions, contributing to the final spectral outcomes. Thus, two simple fluorophores can be readily combined to give emissions over much of the visible spectrum, all requiring only a single excitation. The results demonstrate that fluorescent nucleobases in oligomeric form can act cooperatively as electronic units, and that fluorophore sequence in such oligomers is as important as fluorophore composition in determining fluorescence properties.     

Toward understanding the ionization of biomarkers from micrometer particles by bio-aerosol mass spectrometry

The appearance of informative signals in the mass spectra of laser-ablated bio-aerosol particles depends on the effective ionization probabilities (EIP) of individual components during the laser ionization process. This study investigates how bio-aerosol chemical composition governs the EIP values of specific components and the overall features of the spectra from the bio-aerosol mass spectrometry (BAMS). EIP values were determined for a series of amino acid, dipicolinic acid, and peptide aerosol particles to determine what chemical features aid in ionization. The spectra of individual amino acids and dipicolinic acid, as well as mixtures, were examined for extent of fragmentation and the presence of molecular ion dimers, which are indicative of ionization conditions. Standard mixtures yielded information with respect to the significance of secondary ion plume reactions on observed spectra. A greater understanding of how these parameters affect EIP and spectra characteristics of bio-aerosols will aid in the intelligent selection of viable future biomarkers for the identification of bio-terrorism agents.     

Assembly of colloidal particles into microwires using an alternating electric field

We have investigated the dielectrophoretic assembly of colloidal gold, carbon black, and carbon nanotubes into electrical wires. The resulting microwires have diameters less than 1 microm, with lengths ranging from 5 microm to 3 mm. Current-voltage curves for these wires indicate an ohmic response, where the resistance is determined by the type of colloid and by the frequency of the alternating field used to grow the wires. The predicted frequency dependence of dielectrophoresis is confirmed by experiment. Measurements of the threshold voltage for initial wire growth are also presented. These experiments demonstrate that a variety of nanoparticles can be assembled into microwires for sensor applications.     

Supplementary d and f functions in molecular wave functions: Optimum and nonoptimum exponents

Energy optimization calculations have been carried out to determine the variability of optimum p, d, and f polarization function exponents in molecules containing first- and second-row elements and in normal valency and hypercoordinate species. Optimum exponents were determined for single sets of higher-order functions at both Hartree–Fock and correlated (Moller–Plesset) levels of theory using the Dunning–Hay double zeta and the McLean–Chandler triple zeta basis sets. More detailed calculations were used to test the response to nonoptimum d and f function exponents of the total energy, the optimum geometry, and harmonic stretching frequencies. The variability in optimum exponents and the size of the energy penalties incurred by adopting nonoptimum values reduces the utility of standard exponents for p, d, and f polarization functions. © 1993 John Wiley & Sons, Inc.     

Synthesis of sterically hindered 1-arylpyrrolidines and 1-arylpiperidines by condensation of primary aromatic amines with cyclic ethers or diols

A variety of 1-($\text{o}$-alkylphenyl)- and 1-($\text{o}$-$\text{o}$'-dialkylphenyl)- pyrrolidines and -piperidines were prepared by the gas phase alumina mediated condensation of tetrahydrofuran (THF), tetrahydropyran (THP) or the corresponding diols with primary aromatic amines in fair to high yield. This methodology can also be used for the synthesis of 1-phenylhexahydroazepine from aniline. A mechanistic interpretation of the catalytic action of alumina is presented.     

Evidence for a monomeric structure of nonribosomal Peptide synthetases

Nonribosomal peptide synthetases (NRPS) are multimodular biocatalysts that bacteria and fungi use to assemble many complex peptides with broad biological activities. The same modular enzymatic assembly line principles are found in fatty acid synthases (FAS), polyketide synthases (PKS), and most recently in hybrid NRPS/PKS multienzymes. FAS as well as PKS are known to function as homodimeric enzyme complexes, raising the question of whether NRPS may also act as homodimers. To test this hypothesis, biophysical methods (size exclusion chromatography, analytical equilibrium ultracentrifugation, and chemical crosslinking) and biochemical methods (two-affinity-tag-system and complementation studies with enzymes being inactivated in different catalytic domains) were applied to NRPS subunits from the gramicidin S (GrsA-ATE), tyrocidine (TycB(1)-CAT and TycB(2-3)-AT.CATE), and enterobactin (EntF-CATTe) biosynthetic systems. These methods had revealed the dimeric structure of FAS and PKS previously, but all three NRPS systems investigated are functionally active as monomers.     

A convenient one-pot synthesis of 1,8-naphthyridones

In this paper, we disclose an efficient one-pot procedure for the preparation of substituted 1,8-naphthyridin-4-one analogues. Previous efforts to effect this type of transformation were complicated by the formation of benzene tricarboxylate. Via the use of excess base, the impurity formation was completely inhibited. This allowed for the clean preparation of the desired intermediate and subsequent formation of naphthyridone analogues in a single flask, which could then be crystallized directly from the reaction mixture in good yield and high purity.