Detecting Alzheimer's disease biomarkers: From antibodies to new bio-mimetic receptors and their application to established and emerging bioanalytical platforms – A critical review

The failure of therapeutic treatment of Alzheimer's disease (AD) patients can be related to the late onset of symptoms and, consequently, to a delayed pharmacological aid to counteract neurodegenerative progression. This is coupled to the fact that the diagnosis based on clinical criteria alone introduces high misdiagnosis rate. The availability of assessed biomarkers is therefore of crucial importance not only to counteract late diagnosis, but also to manage patients at high risk of AD development eligible for novel therapies. At the present time, amyloid-β peptides (Aβ_1-40 and Aβ_1-42 isoforms), alone or in combination with Tau protein (total and phosphorylated forms (p-tau)) constitute reliable AD biomarkers and result highly predictive of progression to AD dementia in patients with mild cognitive impairment (MCI), the earliest clinical presentation of AD. Improvement of existing diagnostic tools must take advantage of innovative bioanalytical approaches. In this review, starting from commercially available diagnostic platforms based on antibodies as recognition elements, we intended to provide a double point of view on the issue: 1) progresses achieved on innovative bioanalytical platforms (mainly sensors and biosensors) by using antibodies as consolidated receptors; 2) advance on promising bio-mimetic receptors alternative to antibodies in AD research, and their applications on conventional or innovative analytical platforms. In particular, we first focused on optical- (Propagating and Localized Surface Plasmon Resonance, named here SPR and LSPR) and electrochemical (voltammetric and impedimetric) transduction principles. Together with bioanalytical assays for AD biomarkers quantification, works aimed to investigate and understand their behavior, characteristics, and roles will also be considered in the discussion.     

Stereodivergent <Emphasis Type="Italic">Baylis-Hillman</Emphasis> Reaction of a Chiral Acryloyl Imide Exploiting Ion-Chelation Effect: Mechanistic Insight on the Rearrangement of Trichloroacetimidates of the <Emphasis Type="Italic">Baylis-Hillman</Emphasis> Adducts to Trichloroacetamides

Summary. In the presence of DABCO, ethyl glyoxalate and (4S,5R)-1,5-dimethyl-3-acryloyl-4-phenylimidazolidin-2-one gave mixtures of the corresponding Baylis-Hillman adducts enriched in either isomer, depending on the absence or the presence of LiClO₄ in the reaction mixture. A diastereomeric mixture in 10:90 dr allowed to definitively establish the mechanism of the reaction leading to trichloroacetamides starting from trichloroacetimidates of the Baylis-Hillman adducts.     

Synthesis of double core chromophore-functionalized nanothreads by compressing azobenzene in a diamond anvil cell

Carbon nanothreads are likely the most attracting new materials produced under high pressure conditions. Their synthesis is achieved by compressing crystals of different small aromatic molecules, while also exploiting the applied anisotropic stress to favor nontopochemical paths. The threads are nanometric hollow structures of saturated carbon atoms, reminiscent of the starting aromatic molecule, gathered in micron sized bundles. The examples collected so far suggest that their formation can be a general phenomenon, thus enabling the design of functionalities and properties by suitably choosing the starting monomer on the basis of its chemical properties and crystal arrangement. The presence of heteroatoms or unsaturation within the thread is appealing for improving the processability and tuning the electronic properties. Suitable simple chromophores can fulfill these requirements and their controlled insertion along the thread would represent a considerable step forward in tailoring the optical and electronic properties of these mechanically extraordinary materials. Here, we report the synthesis and extensive characterization of double core nanothreads linked by azo groups. This is achieved by compressing azobenzene in a diamond anvil cell, the archetype of a wide class of dyes, and represents a fundamental step in the realization of nanothreads with tailored photochemical and photophysical properties.

One-step high-pressure synthesis of 2D crystalline double nanothreads linked by azo groups.     

Stereoselective iodocyclisation of 3-acylamino-2-methylene alkanoates: a computational insight

In order to explain the high stereocontrol occurring in the iodocyclisation of 3-acylamino-2-methylenealkanoates, either the conformational space of the starting products or the cyclisation reaction potential energy surface (PES) was explored at DFT level of theory, the polarised continuum formalism (PCM) for chloroform being used in order to consider the solvent effect. The observed stereoselection was ascribed to both the near attack conformations (NACs) distribution and the energy differences between the two possible and competitive cyclisation pathways leading to cis- and trans-diastereomers.     

Procedure for retrieving the optical properties of a two-layered medium from time-resolved reflectance measurements

A procedure for retrieving the optical properties of a two-layered diffusive medium based on an exact analytical solution of the diffusion equation and on relative multidistance time-resolved reflectance measurements is presented. The method overcomes some limitations of previously developed procedures. Five parameters of the medium have been fitted: the absorption and the reduced scattering coefficients of both layers and the thickness of the first layer. The actual values of the parameters are correctly retrieved by the procedure. The inversion procedure does not require an initial guess for the unknown optical properties, but the starting value for the thickness of the first layer needs to be estimated with an error smaller than 50%.     

Synthesis and host-guest studies of chiral N-linked peptidoresorc[4]arenes

Four cone resorc[4]arene octamethyl ethers (10, 11, ent-10, and ent-11) tetrafunctionalized at the feet with valyl-leucine [LL- (6); DD- (ent-6)] and leucyl-valine [LL- (9); DD- (ent-9)] methyl esters have been synthesized. These compounds, obtained by conjugation of macrocycle tetracarboxylic acid chlorides with the appropriate terminal amino groups of the above dipeptides, are N-linked peptidoresorc[4]arenes. We found that these macrocycles (M) are capable of recognizing the homologue dipeptides as guests (G), both in solution and in the gas phase, by forming relatively stable host-guest complexes ([M.G]), resistant to chromatographic purification but not to heating. Complexation phenomena between M and G in solution were investigated by NMR methods, including NMR DOSY experiments, for the detection of translational diffusion. Heteroassociation constants of 2030 and 186 M(-1) were obtained by the Foster-Fyfe method for the complexes [10.6] and [10.ent-6], respectively, the latter being comparable to the self-association constant of dipeptide itself. Conversely, the structural features of the proton-bound complexes [M.H.Gn]+ (n = 1, 2), generated in the gas phase by electrospray ionization mass spectrometry (ESI-MS), were investigated by collision-induced dissociation (CID) experiments. In both cases, the four N-linked peptidoresorc[4]arenes were shown to act as synthetic receptors and to recognize the homologue dipeptide by means of hydrogen bonds.     

High-performance liquid chromatography analysis of polyacetylenes and polyenes in Echinacea pallida by using a monolithic reversed-phase silica column

In this study, a RP-HPLC method for the analysis of polyacetylenes and polyenes in Echinacea pallida roots and phytopharmaceuticals was developed. The reference compounds used for quantification were isolated from the plant material and their structures were determined on the basis of the analysis of UV, IR, NMR and MS data. The complete structure elucidation of three compounds, namely 8-hydroxy-tetradec-(9E)-ene-11,13-diyn-2-one (1), tetradec-(8Z)-ene-11,13-diyn-2-one (6) and pentadec-(8Z)-en-2-one (9) is described. In the analysis of the n-hexane extracts of E. pallida roots, the comparison between conventional and monolithic columns showed that the elution order in both cases is identical and the selectivity is equivalent. However, the retention times achieved by the monolithic column are shorter, resulting in a faster separation (20 min). Therefore, the analyses were carried out on a Chromolith Performance RP-18e (100 mm x 4.6 mm i.d.), with a gradient mobile phase composed by H(2)O and ACN at the flow rate of 2 mL/min. The column was thermostatted at 20 degrees C. The photodiode array detector monitored the eluent at 210 nm. The validation procedure confirmed that this technique affords reliable analysis of these components and is appropriate for the quality control of complex matrices, such as E. pallida roots and phytopharmaceuticals.     

Structure and reactivity of pyridine crystal under pressure

In this work we have performed an extensive high pressure study of the condensed phases of pyridine by Raman and IR spectroscopy. We have evidenced three different polymorphs, two crystalline, and one glassy and established the pressure conditions in which they exist as stable or metastable phases by several compression/decompression experiments both on annealed and not annealed samples. Crystallization and phase transitions are found to be kinetically driven. The vibrational spectra are extremely complex due to the low symmetry of the crystals, which implies a large number of crystal components. This complexity required a careful analysis of both IR and Raman data that led to the identification of 20 out of 21 external modes expected for phase II. We did not find any conclusive indication of phase transitions on compressing phase II thus indicating that phase II is likely the stable phase at the onset pressure of the chemical transformation of pyridine. The latter starts at 18 GPa and relevant differences from the well characterized benzene reaction suggest that it is likely driven by crystal defects.     

On L^{r} hypoellipticity of solutions with compact support of the Cauchy–Riemann equation

In one complex variable, the existence of a compactly supported solution to the Cauchy–Riemann equation is related to the vanishing of certain integrals of the data; trying to generalize this approach, we find an explicit construction, via convolution, for a compactly supported solution in \(\mathbb C ^n\) , which allows us to estimate the \(L^p\) norm of the solution. We also investigate the possible generalizations of this method to domains of the form \(P\setminus Z\) , where \(P\) is a polydisc and \(Z\) is the zero locus of some holomorphic function.