Methodological aspects of an off‐line combination of preparative isotachophoresis and high‐performance liquid chromatography with mass spectrometry in the analysis of biological matrices

This work reports on some methodological aspects of an off‐line combination of preparative ITP and HPLC with mass spectrometric detection (pITP‐HPLC‐MS) and its potential applications to the analysis of high molecular mass compounds present in complex biological matrices from the analytical chemistry perspective. Lysozyme served as the model analyte and human saliva as the complex biological matrix in this study. A mixture of five low‐molecular mass compounds was found and successfully used in the pITP experiments as discrete spacers to isolate the analyte from the interferents present in the complex biological matrix and to minimize their disturbance effect on the final MS analysis. The experiments at the pITP stage were performed in the cationic mode. On‐column conductivity detectors were used for the detection of ITP zones. Lysozyme was found in the human saliva samples using just deconvolution of the MS data after background correction. The MS data obtained from HPLC‐MS analysis of pITP fractions exhibited the great analytical potential of the combination of pITP‐HPLC‐MS resulting from the ITP clean‐up effect as well as the ITP preconcentration of the analyte present at low concentration levels in complex biological matrices.     

Characterisation of Taxlllaids A–G; Natural Products from Xenorhabdus indica

Six new lipodepsipeptides and an additional linear derivative named taxlllaids A–G ( 1 – 7 ) have been identified in the entomopathogenic bacterium Xenorhabdus indica. The structures of the main compounds have been solved by detailed NMR spectroscopic analysis and the structures of minor derivatives were elucidated by a combination of labelling experiments and detailed MS experiments. The absolute configuration of the taxlllaids was deduced by using the advanced Marfey method and analysis of the biosynthesis gene cluster showing the presence of epimerisation domains, which was subsequently proved to be correct by solid‐phase peptide synthesis of all taxlllaids. The exchange of a single amino acid in the adenylation domain was shown to be responsible for substrate promiscuity of the third A domain, resulting in the incorporation of leucine, phenylalanine or tyrosine. Bioactivity testing revealed the taxlllaids to be weakly active against Plasmodium falciparum and against a number of eukaryotic cell lines.     

A Novel pH/Light‐Triggered Surface for DNA Adsorption and Release

A simple strategy for the immobilization of Cy3‐labeled single strand DNA (Cy3‐ssDNA) on a Si(001) surface and its release under control of both light and pH stimuli is presented. In order to prepare a dual pH/light‐triggered surface, positively chargeable azobenzene molecules are self‐assembled on the Si(001) surface. The surface wettability of this substrate can be changed under influence of both light and pH conditions. The substrates can be positively charged under mildly acidic conditions. The pH‐sensitive behavior of the film allows binding of Cy3‐ssDNA on the functionalized Si(001) surface through e?ective electrostatic interactions with the negatively charged polynucleotide backbone. Moreover, irradiation of the film with UVA light induces trans–cis isomerization of the azobenzene units on the surface. As a result, the binding a?nity for DNA decreases due to the changing surface hydrophilicity. In order to understand and control the reversible photoswitchable mechanism of this surface, water contact angles are measured after UVA and visible light irradiation. The release of DNA from a dual pH/light‐sensitive sample is performed using fluorescence microscopy. The results show that irradiation of the film with UVA light induces trans–cis isomerization of the photoresponsive azobenzene units; this leads to significant changes in the surface hydrophilicity and reduces the binding affinity for DNA.     

Label‐Free Measurements of the Diffusivity of Molecules in Lipid Membranes

An important and characteristic property of a cell membrane is the lateral mobility of protein molecules in the lipid bilayer. This has conventionally been measured by labeling the molecules with fluorescent markers and monitoring their mobility by different fluorescence‐based techniques. However, adding the label to the studied molecule may affect the system, so it is an assumption in almost all experiments that the measured mobility of the biomolecule with its label is the same as that of the unlabeled molecule. However, this assumption is rarely tested due to a lack of suitable methods. In this work, a new technique to perform label‐free diffusivity measurements is developed and used to measure the effect of the label for two common protein–lipid systems: 1) streptavidin (SA) coupled to a supported lipid bilayer (SLB) through biotinylated lipids and 2) the extracellular part of the T‐cell adhesion protein CD2, coupled to an SLB through histidine tags to nickel‐chelating lipids. A measurable (≈12 %) decrease in diffusivity is found for both labeled proteins, even though the molecular mass of the label is almost 100 times smaller than those of the proteins (≈50 kDa). The results illustrate the importance of being able to study different biophysical properties of cell membranes and their mimics without relying on fluorescent labels, especially if fluorescent labeling is difficult or is expected to affect the nature of the intermolecular interactions being studied.     

Calix[4]arene-bis(t-octylbenzo-18-crown-6) as an extraordinarily effective macrocyclic receptor for the univalent thallium cation

From extraction experiments and $ \gamma $ -activity measurements, the exchange extraction constant corresponding to the equilibrium Tl⁺ (aq) + 1·Cs⁺ (org) ? 1·Tl⁺ (org) + Cs⁺ (aq) taking place in the two-phase water–phenyltrifluoromethyl sulfone (abbrev. FS 13) system (1 = calix[4]arene-bis(t-octylbenzo-18-crown-6); aq = aqueous phase, org = FS 13 phase) was evaluated as log K _ex (Tl⁺, 1·Cs⁺) = 1.7 ± 0.1. Further, the extraordinarily high stability constant of the 1·Tl⁺ complex in FS 13 saturated with water was calculated for a temperature of 25 °C: log β _org(1·Tl⁺) = 13.1 ± 0.2. Finally, by using quantum mechanical DFT calculations, the most probable structure of the cationic complex species 1·Tl⁺ was derived. In the resulting 1·Tl⁺ complex, the “central” cation Tl⁺ is bound by eight bond interactions to six oxygen atoms from the respective 18-crown-6 moiety and to two carbons of the corresponding two benzene rings of the parent receptor 1 via cation–π interaction.     

Thermal properties and structure of (As2S3)100−x(Sb4S4)x glassy system

Thermal properties and structure of bulk glasses of (As₂S₃)_1?x(Sb₄S₄)_x system (x varies from 0 to 60 mol%) were studied by differential scanning calorimetry and Raman spectroscopy. It was found that with increasing Sb content the glasses can be sorted out to the three groups. The structure of glasses with x ≤ 10 is build-up mainly from AsS_3/2 pyramidal units and the well-known crystallization resistance of As₂S₃ can explain the reluctance of these undercooled liquids against crystallization. In glasses with a higher content of antimony, i.e., 10 < x ≤ 30 mol%, the vibration characteristics of As₄S₄ clusters appear. Undercooled melts of these glasses crystallize forming both β-As₄S₄ and high-temperature phases of Sb₂S₃. Structure of glasses with the highest antimony content (x > 30 mol%) is based on SbS_3/2 structural units significantly lowering stability of their undercooled melts from which only Sb₂S₃ crystallizes.     

Chemical modification of silica gel with synthesized Schiff base hydrazone derivative and application for preconcentration and separation of U(VI) ions from aqueous solutions

Schiff base hydrazone derivative (HL) sorbent was synthesized according to the literature to be used in the adsorption and preconcentration of U(VI) ions from aqueous solution and it was exposed to immobilization, and new solid support material was obtained. For this purpose, Schiff base hydrazone derivative (HL) was chemically bonded to silica gel surface immobilized 3-aminopropyl trimethoxysilane, then analyzed by Fourier transform infrared, Brunauer–Emmett–Teller, scanning electron microscopy and elemental analysis. The influence of the solution pH, amount of sorbent, contact time, temperature, foreign ion effect and initial U(VI) concentration was investigated. The maximum U(VI) uptake capacity was found to be 8.46 mg/g.     

Preparation and characterization of activated carbon from pine cone by microwave-induced ZnCl2 activation and its effects on the adsorption of methylene blue

In this work, activated carbon prepared from pine cone (PCAC) with ZnCl₂ as an activation agent under microwave radiation was investigated. The activation step was performed at the microwave input power of 400 W and radiation time of 5 min. The properties of activated carbon were characterized by N₂ adsorption Brunauer–Emmett–Teller (BET), scanning electron microscopy and Fourier transform infrared spectroscopy. Results showed that the BET surface area, Langmuir surface area, and total pore volume of PCAC were 939, 1,486 m²/g and 0.172 cm³/g, respectively. Adsorption capacity was demonstrated by the iodine numbers. The adsorptive property of PCAC was tested using methylene blue dye. Equilibrium data was best fitted by the Langmuir isotherm model, showing a monolayer adsorption capacity of 60.97 mg/g. The pseudo-first- and pseudo-second-order kinetic models were examined to evaluate the kinetic data, and the rate constants were calculated. Adsorption of the dyes followed pseudo-first order kinetics. Thermodynamic parameters such as free energy, enthalpy and entropy of dye adsorption were obtained.