Reinvestigation of the stereochemistry of kulokekahilide-2

An attempt to carry out a total synthesis of kulokekahilide-2 (1) by macrolactonization of a seco acid prepared from a suitably protected hexapeptide and a dioxy acid moiety unexpectedly resulted in the formation of the 43-epimer (1a) of the cytotoxic depsipeptide, for which structure 1b has previously been proposed. A second attempt involving macrolactamization of the corresponding amino acid gave the target product, 1b, but the spectral data of the product did not match those of natural 1. Furthermore, neither 1a nor 1b showed any cytotoxicity, from which it is concluded that the structure of natural 1 is incorrect and should be re-examined.     

Single-Mode Operation of Broad-Area Diode Laser at 670 nm by External Cavity Configuration with a Diffraction Grating

We demonstrate the single mode operation of a broad-area diode laser at 670 nm by means of an external cavity configuration using a diffraction grating. The output power of 150 mW is obtained with a spectral width of 40 MHz.     

How Is the Local-scale Gravitational Instability Influenced by the Surrounding Large-scale Structure Formation?

We develop the formalism to investigate therelation between the evolution of the large-scale(quasi) linear structure and that of the small-scalenonlinear structure in Newtonian cosmology within theLagrangian framework. In doing so, we first derive thestandard Friedmann expansion law using the averagingprocedure over the present horizon scale. Then thelarge-scale (quasi) linear flow is defined by averaging the full trajectory field over a large-scaledomain, but much smaller then the horizon scale. Therest of the full trajectory field is supposed todescribe small-scale nonlinear dynamics. We obtain the evolution equations for the large-scale andsmall-scale part of the trajectory field. These arecoupled each other in most general situations. It isshown that if the shear deformation of fluid elements is ignored in the averaged large-scaledynamics, the small-scale dynamics is described byNewtonian dynamics in an effectiveFriedmann-Robertson-Walker (FRW) background with a localscale factor. The local scale factor is defined by the sum of theglobal scale factor and the expansion deformation of theaveraged large-scale displacement field. This means thatthe evolution of small-scale fluctuations is influenced by the surrounding large-scale structurethrough the modification of FRW scale factor. The effectmight play an important role in the structure formationscenario.     

Ab initio MO study of the chlorophyll dimer in the photosynthetic reaction center. I. A theoretical treatment of the electrostatic field created by the surrounding proteins

The charge separation occurring in the photosynthetic reaction center is the primary subject in order to understand the whole photosynthetic process. In this article, the electronic structures of the chlorophyll dimer, in which photoexcitation occurs, are investigated by using the ab initio molecular orbital scheme and pseudocharges and dipoles method which takes into account the electrostatic effect of the surrounding proteins, pigments, and aqueous solvent. As a first step, the ionization potentials of BCmp, BCIp, and the dimer of Rhodopseudomonas viridis are computed to study the characteristic of each molecule toward the elucidation of the primary charge separation. It has been found, from the present calculations, that BCmp and BClp constituting the dimer are not equivalent in their electronic ground states, since the electron could be removed more easily from BCmp than from BClp for two reasons: (1) the distorted molecular plane of Cmp, and (2) the effects of the surrounding electrostatic potentials to BCmp and BCIp. This tendency is further strengthened by the polarization of the environment, when, to the ab initio MO calculation, the contribution from the induced dipoles of the neighboring atoms in the proteins and other chromophores is included. From the present application, induced electric dipoles are found to be important to describe the molecular electronic structures affected by proteins. © 1997 John Wiley & Sons, Inc.     

A protocol for searching the most probable phase‐retrieved maps in coherent X‐ray diffraction imaging by exploiting the relationship between convergence of the retrieved phase and success of calculation

Coherent X‐ray diffraction imaging (CXDI) is a technique for visualizing the structures of non‐crystalline particles with size in the submicrometer to micrometer range in material sciences and biology. In the structural analysis of CXDI, the electron density map of a specimen particle projected along the direction of the incident X‐rays can be reconstructed only from the diffraction pattern by using phase‐retrieval (PR) algorithms. However, in practice, the reconstruction, relying entirely on the computational procedure, sometimes fails because diffraction patterns miss the data in small‐angle regions owing to the beam stop and saturation of the detector pixels, and are modified by Poisson noise in X‐ray detection. To date, X‐ray free‐electron lasers have allowed us to collect a large number of diffraction patterns within a short period of time. Therefore, the reconstruction of correct electron density maps is the bottleneck for efficiently conducting structure analyses of non‐crystalline particles. To automatically address the correctness of retrieved electron density maps, a data analysis protocol to extract the most probable electron density maps from a set of maps retrieved from 1000 different random seeds for a single diffraction pattern is proposed. Through monitoring the variations of the phase values during PR calculations, the tendency for the PR calculations to succeed when the retrieved phase sets converged on a certain value was found. On the other hand, if the phase set was in persistent variation, the PR calculation tended to fail to yield the correct electron density map. To quantify this tendency, here a figure of merit for the variation of the phase values during PR calculation is introduced. In addition, a PR protocol to evaluate the similarity between a map of the highest figure of merit and other independently reconstructed maps is proposed. The protocol is implemented and practically examined in the structure analyses for diffraction patterns from aggregates of gold colloidal particles. Furthermore, the feasibility of the protocol in the structure analysis of organelles from biological cells is examined.     

Development of Computational Algorithms for Evaluating Option Prices Associated with Square-Root Volatility Processes

The stochastic volatility model of Heston (Rev Financ Stud 6:327–343, 1993) has been accepted by many practitioners for pricing various financial derivatives, because of its capability to explain the smile curve of the implied volatility. While analytical results are available for pricing plain Vanilla European options based on the Heston model, there hardly exist any closed form solutions for exotic options. The purpose of this paper is to develop computational algorithms for evaluating the prices of such exotic options based on a bivariate birth-death approximation approach. Given the underlying price process S _t , the logarithmic process U _t  = logS _t is first approximated by a birth-death process B^U_tB^U_t via moment matching. A second birth-death process B^V_tB^V_t is then constructed for approximating the stochastic volatility process V _t through infinitesimal generator matching. Efficient numerical procedures are developed for capturing the dynamic behavior of { B^U_t , B^V_t }\{ B^U_t , B^V_t \} . Consequently, the prices of any exotic options based on the Heston model can be computed as long as such prices are expressed in terms of the joint distribution of { S _t ,V _t } and the associated first passage times. As an example, the prices of down-and-out call options are evaluated explicitly, demonstrating speed and fair accuracy of the proposed algorithms.     

High-repetition-rate 12 fs pulse amplification by a Ti:sapphire regenerative amplifier system

We demonstrate the direct generation of 12 fs pulses from a Ti:sapphire regenerative amplifier system at a 1 kHz repetition rate utilizing properly designed broadband components for chirped-pulse amplification. Optimized designs of a regenerative amplifier with a multilayer gain-narrowing compensator and an adaptive dispersion compensator with a spatial light modulator contribute to the shorter pulse amplification.     

On/off spin-crossover phenomenon and control of the transition temperature in assembled Iron(II) complexes

The present study reveals the on/off of spin-crossover (SCO) phenomenon in assembled Fe(II) complexes bridged by bis(pyridyl) type ligand. Whether SCO phenomenon occurs or not in assembled Fe(II) complexes bridged by bis(pyridyl) type ligand is determined by local structure around iron atom. SCO phenomenon occurs when the coordinating pyridines facing to each other across the iron atom are propeller type, while the phenomenon does not occur when they are parallel type or distorted propeller type. DFT calculation explained that, in the shortening of Fe-pyridine bonds when changing from high-spin state to low-spin state, the pyridines of propeller type can approach the iron atom with smaller steric hindrance than those of parallel and distorted propeller type complexes. The local structure is controlled by introducing methyl substituent and introducing π-system, changing SCO phenomenon. And the transition temperature of SCO is also controlled in assembled complexes bridged by 1,2-bis(4-pyridyl)ethane by mixing anionic ligand.     

In-Line Reactions and Ionizations of Vaporized Diphenylchloroarsine and Diphenylcyanoarsine in Atmospheric Pressure Chemical Ionization Mass Spectrometry

We propose detecting a fragment ion (Ph₂As⁺) using counter-flow introduction atmospheric pressure chemical ionization ion trap mass spectrometry for sensitive air monitoring of chemical warfare vomiting agents diphenylchloroarsine (DA) and diphenylcyanoarsine (DC). The liquid sample containing of DA, DC, and bis(diphenylarsine)oxide (BDPAO) was heated in a dry air line, and the generated vapor was mixed into the humidified air flowing through the sampling line of a mass spectrometer. Humidity effect on the air monitoring was investigated by varying the humidity of the analyzed air sample. Evidence of the in-line conversion of DA and DC to diphenylarsine hydroxide (DPAH) and then BDPAO was obtained by comparing the chronograms of various ions from the beginning of heating. Multiple-stage mass spectrometry revealed that the protonated molecule (MH⁺) of DA, DC, DPAH, and BDPAO could produce Ph₂As⁺ through their in-source fragmentation. Among the signals of the ions that were investigated, the Ph₂As⁺ signal was the most intense and increased to reach a plateau with the increased air humidity, whereas the MH⁺ signal of DA decreased. It was suggested that DA and DC were converted in-line into BDPAO, which was a major source of Ph₂As⁺.

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MTV-G experiment: Probing non-standard strong gravitational field at nuclear scale using geodetic precession

A new experiment named MTV-G, probing a large electron spin-precession due to a possible strong gravitational field, which predicted by large extra dimension model, is started at TRIUMF from 2011. In an electron-nuclear scattering experiment, a strong gravitational field is tested as a large spin precession effect caused by geodetic precession predicted by general relativity theory as a result of a warped space-time around nuclei. Experimental design using spin polarized electron source and Mott-spin analyzer, commissioning experiment and the preliminary results are described.