Isolation of a new indoxyl alkaloid,Amoenamide B,from Aspergillus amoenus NRRL 35600: Biosynthetic implications and correction of the structure of Speramide B

A new prenylated indoxyl alkaloid, Amoenamide B (1), was isolated from Aspergillus amoenus NRRL 35600 along with Asperochramide A (2). Although many prenylated oxindole alkaloids, containing bicyclo[2.2.2]diazaoctane cores, have been isolated from the fungus of the genera Aspergillus and Penicillium to date, 1 is the fourth compound with the indoxyl unit containing the cores. During the structure elucidation of 1, we found that the planar structure matched to that of Speramide A (3), isolated from A. ochraceus KM007, but the reported structure of 3 was incorrect and turned out to be that of Taichunamide H (4), recently isolated from A. versicolor HDN11-84.     

Dissolution kinetics of K-alum crystals as judged from the measurements of surface undersaturations

The normal dissolution rates, the slopes and the average velocities of dissolution steps of etch pits on the (111) face of a K-alum crystal, originating from dislocations with Burgers vector 110, were measured in relation to the surface undersaturations. From the mutual relations, it was shown that the dissolution was controlled by both diffusion and surface kinetic processes, although the contribution of the latter process was smaller than in the case of growth. It was also demonstrated that the normal dissolution rate was always larger than the growth rate. This is attributed to the fact that the slopes of growth hillocks are invariably smaller than those of etch pits.     

Fine-tuning of boron complexes with cage-shaped ligand geometry: rational design of triphenolic ligand as a template for structure control

Boron complexes surrounded with organic cages were controlled precisely by a remote atom placed at the bottom of the cage. A replacement of the bottom tether atom (carbon or silicon) changed the characteristics (kinetic and thermodynamic factors) of boron complexes by geometric effects. A theoretical study shows that the bottom atoms also control eigenvalues of MO. This cage complex will provide a systematic template for fine-tuning of metal complexes to create various properties.     

Direct construction of bicyclic heterocycles by palladium-catalyzed domino cyclization of propargyl bromides

The palladium-catalyzed domino cyclization of propargyl bromides having two nucleophilic functional groups is described. Treatment of 1,7-diamino-5-bromohept-3-yne derivatives with catalytic Pd(PPh3)4 in the presence of NaH in MeOH gives the 2,7-diazabicyclo[4.3.0]non-5-enes in good yields. Interestingly, the regioselectivity of the reaction is completely controlled by the relative reactivity of the amine functional groups, irrespective of the position of the nucleophiles. The malonate derivative also undergoes domino cyclization to produce a hexahydroindole derivative.     

Wavelength dependence of matrix-assisted laser desorption and ionization using a tunable mid-infrared laser

Matrix-assisted laser desorption and ionization by infrared laser (IR-MALDI) is expected to be an effective methods for soft-ionization of high-molecular weight proteins and intracellular proteins. IR-MALDI is not widely used because its low sensitivity, complexity, high cost, and as it does not work well on commercial MALDI time-of-flight mass spectrometers (TOFMSs). We employed a tunable mid-infrared (MIR) laser as a light source for MALDI to investigate the IR-MALDI. The laser wavelength can be tuned within a range from 5.5 to 10.0 μm, and included several biomaterial group vibration modes. We evaluated the wavelength dependence of ionization in IR-MALDI for four matrices: succinic acid, urea, 3,5-dimethoxy-4-hydroxycinnamic acid (sinapic acid) and 2,5-dihydroxybenzoic acid (DHB). These matrices contained various groups of vibration modes, and absorbed an infrared (IR) energy at a specific wavelength. The mass spectra of angiotensin II was obtained at a specific wavelength corresponding to the CO stretching and benzene ring vibration mode. In IR-MALDI, we considered the strong molecular bond attracting an electron from a neighboring hydrogen atom, possibly protonating the hydrogen atom.     

Stryphnosides A-F, six new triterpene glycosides from the pericarps of Stryphnodendron fissuratum

Six new triterpene glycosides stryphnosides A-F (1-6) were isolated from the pericarps of Stryphnodendron fissuratum (Leguminosae). The structures of 1-6 were determined on the basis of extensive spectroscopic analysis, including two-dimensional (2D) NMR data, and the results of hydrolytic cleavage. The sugar moieties of 3-6 are very unique in structure having not only novel sugar sequences but also the terminal α-l-arabinopyranosyl unit with a ¹C₄ conformation. Stryphnosides C (3)-F (6) are the first representative of naturally occurring glycosides with the ¹C₄ terminal α-l-arabinopyranosyl group.     

Safety Evaluation of Far-UV-C Irradiation to Epithelial Basal Cells in the Corneal Limbus

Basal cells in the corneal limbus play an important role in the turnover cycle because they are the source of all cells that constitute the corneal epithelium. We examined the penetration depth of ultraviolet (UV) light in the corneal limbus and assessed the safety of Far-UV-C on stem cells in the basal area of the corneal limbus. Rats were irradiated with UV at peaks of 207, 222, 235, 254 and 311 nm while under anesthesia. The UV penetration depth in the rat corneal limbal epithelium was wavelength dependent: 311 nm UV-B and 254 nm UV-C reached the basal cells of the epithelium, and 235 nm radiation reached the middle area; however, 207 and 222 nm UV-C reached only the superficial layer of the epithelium. Porcine cornea, which is similar to the human eye in size and structure, were irradiated with 222 and 254 nm UV-C. As in rats, 222 nm UV-C reached only the superficial layer of the porcine corneal limbal epithelium. These results indicate that Far-UV-C, such as radiation of wavelengths of 207 and 222 nm, could not reach corneal epithelial stem cells, i.e. the cells remained intact. It is unlikely that the turnover of the corneal epithelium is obstructed or disrupted by exposure to Far-UV-C.     

Mean dimension of $${\mathbb{Z}^k}$$-actions

Mean dimension is a topological invariant for dynamical systems that is meaningful for systems with infinite dimension and infinite entropy. Given a \({\mathbb{Z}^k}\)-action on a compact metric space X, we study the following three problems closely related to mean dimension.

1. (1)
   When is X isomorphic to the inverse limit of finite entropy systems?
    
2. (2)
   Suppose the topological entropy \({h_{\rm top}(X)}\) is infinite. How much topological entropy can be detected if one considers X only up to a given level of accuracy? How fast does this amount of entropy grow as the level of resolution becomes finer and finer?
    
3. (3)
   When can we embed X into the \({\mathbb{Z}^k}\)-shift on the infinite dimensional cube \({([0,1]^D)^{\mathbb{Z}^k}}\)?
    

These were investigated for \({\mathbb{Z}}\)-actions in Lindenstrauss (Inst Hautes Études Sci Publ Math 89:227–262, 1999), but the generalization to \({\mathbb{Z}^k}\) remained an open problem. When X has the marker property, in particular when X has a completely aperiodic minimal factor, we completely solve (1) and a natural interpretation of (2), and give a reasonably satisfactory answer to (3).A key ingredient is a new method to continuously partition every orbit into good pieces.