Functional magnetic resonance imaging: Comparison between activation maps and computation pipelines in a clinical context

In this study new evaluation strategies for comparing different Statistical Parametric Maps computed from fMRI time-series analysis software tools are proposed. The aim of our work is to assess and quantitatively evaluate the statistical agreement of activation maps. Some pre-processing steps are necessary to compare SPMs (Statistical Parametric Maps), including segmentation and co-registration. The study of the statistical agreement is carried out following two ways. The first way considers SPMs as the result of two classification processes and extracts confusion matrix and Cohen's kappa index to assess agreement. Some considerations will be made on the statistical dependence of classes and a new formulation of kappa index will be used for overcoming this problem. The second way considers SPMs as two 3D images, and computes the similarity of SPMs images with a fuzzy formulation of the Jaccard Index. Several experiments were conducted both to assess the performance of the proposed evaluation tools and to compare activation maps computation pipelines from two widely used software tools in a clinical context.     

Conformation of ionizable poly Para phenylene ethynylene in dilute solutions

The conformation of dinonyl poly para phenylene ethynylenes (PPEs) with carboxylate side chains, equilibrated in solvents of different quality have been studied using molecular dynamics simulations. PPEs are of interest because of their tunable electro‐optical properties, chemical diversity, and functionality which are essential in wide range of applications. The polymer conformation determines the conjugation length and their assembly mode and affects electro‐optical properties which are critical in current and potential uses. This study investigates the effect of carboxylate fraction on PPEs side chains on the conformation of chains in the dilute limit, in solvents of different quality. The dinonyl PPE chains are modeled atomistically, where the solvents are modeled both implicitly and explicitly. Dinonyl PPEs maintained a stretched out conformation up to a carboxylate fraction f of 0.7 in all solvents studied. The nonyl side chains are extended and oriented away from the PPE backbone in toluene and in implicit good solvent, whereas in water and implicit poor solvent, the nonyl side chains are collapsed toward the PPE backbone. Rotation around the aromatic ring is fast and no long range correlations are seen within the backbone. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2016 , 54, 582–588     

Cold reaction valleys in the radioactive decay of superheavy 286112, 292114, and 296116 nuclei

Cold reaction valleys in the radioactive decay of superheavy nuclei ²⁸⁶112, ²⁹²114, and ²⁹⁶116 are studied taking Coulomb and Proximity Potential as the interacting barrier. It is found that in addition to alpha particle, ⁸Be, ¹⁴C, ²⁸Mg, ³⁴Si, ⁵⁰Ca, etc. are optimal cases of cluster radioactivity since they lie in the cold valleys. Two other regions of deep minima centered on ²⁰⁸Pb and ¹³²Sn are also found. Within our Coulomb and Proximity Potential Model half-life times and other characteristics such as barrier penetrability, decay constant for clusters ranging from alpha particle to ⁶⁸Ni are calculated. The computed alpha half-lives match with the values calculated using Viola-Seaborg-Sobiczewski systematics. The clusters ⁸Be and ¹⁴C are found to be most probable for emission with T _1/2 < 10³⁰ s. The alpha-decay chains of the three superheavy nuclei are also studied. The computed alpha-decay half-lives are compared with the values predicted by Generalized Liquid Drop Model and they are found to match reasonably well.     

Efficient Preparation of ((3‐Chloro‐2‐fluoro‐phenyl)‐[7‐methoxy‐8‐(3‐morpholin‐4‐yl‐propoxy)‐10,11‐dihydro‐5‐oxa‐2,4,11‐triaza‐dibenzo(a,d)cyclohepten‐1‐yl]‐amine) for In‐Vivo Study

An improved route for the preparation of highly functionalized 5,6‐dihydro‐pyrimido[4,5‐b][1,4]oxazepine 1a in multigram quantities was developed. This new methodology was highlighted by the proper methoxy disposition via a regioselective methylation of 2,4,5‐trihydroxy‐benzaldehyde followed by a magnesium sulfate–promoted cyclization.     

Pencil‐Drawn Dual Electrode Detectors to Discriminate Between Analytes Comigrating on Paper‐Based Fluidic Devices but Undergoing Electrochemical Processes with Different Reversibility

A simple method is described to discriminate between analytes comigrating under on‐plate separation conditions, whose electrochemical behavior displays different reversible characters. It is based on the use of dual electrode detectors pencil‐drawn at the end of paper‐based fluidic channels defined by hydrophobic barriers. Simultaneous detection of comigrating species is achieved by applying to the upstream pencil‐drawn working electrode a potential for the oxidation (or reduction) of both analytes, while to the downstream pencil‐drawn working electrode a potential is imposed for the reverse process involving the product of the sole analyte undergoing a reversible enough electrochemical process. The performance of these inexpensive devices was preliminarily optimized by adopting hexacyanoferrate(II) as prototype species undergoing a reversible anodic process at carbon electrodes. They were then used as dual electrode detectors for thin‐layer chromatographic runs conducted on paper‐based microfluidic devices. Two types of synthetic solutions, one containing different contents of dopamine (DA) and ascorbic acid (AA) and the other of paracetamol (PA) and AA, were chosen as model samples. This choice was prompted us by the fact that in both cases these analytes comigrated under the adopted experimental conditions and required similar enough oxidation potentials. Nevertheless, DA and PA underwent reversible enough anodic processes while an irreversible electrochemical reaction is involved in the AA oxidation. Satisfactory results were found for both couples of target analytes, whose simultaneous detection was achieved within 230 s and was characterized by good enough repeatability and sensitivity. In particular, this approach appears to be well suited for the rapid and inexpensive assembling of electrochemical detectors for flow analysis systems.     

Direct determination of free bilirubin in serum at sub-nanomolar levels

Direct analysis of free bilirubin in human and animal blood serum samples is reported for the first time. A state-of-the-art system comprised of newly developed high-performance liquid chromatography (HPLC) on reverse-phase (RP) C18 support coupled with thermal lens spectrometric detection (TLS), based on excitation at λ = 457.9 nm by an argon laser was used for this purpose. This HPLC-TLS method enabled a baseline separation of all three structural isomers of bilirubin (XIII-α, IX-α and III-α) and the respective degradation products in isocratic mode in fewer than 7 min. The method excels in ultra-high sensitivity with limit of detection (LOD) and limit of quantitation (LOQ) of 90 pM and 250 pM, respectively. Moreover, this method also affords high precision and accuracy, with correlation coefficients R² > 0.997 over a broad linear range (0.250–150 nM) and R² = 0.9998 in a concentration range of clinical interest (0.500–25 nM). The method's boosted sensitivity enabled to streamline sample preparation to just one serum ultrafiltration step, which made qualitative evaluation of sample preparation possible for the first time. The performance of the HPLC-TLS method was assessed to have 20-fold enhanced sensitivity when compared to a comparable method incorporating HPLC coupled with diode array detector (DAD), which is also a novel method by itself, and could be applied for free bilirubin determination in patients with elevated bilirubin levels.     

Multiplicative perturbations of the Laplacian and related approximation problems

Of concern are multiplicative perturbations of the Laplacian acting on weighted spaces of continuous functions on \mathbbR^N,  N 3 1{{\mathbb{R}}^{N},\; N\geq1} . It is proved that such differential operators, defined on their maximal domains, are pre-generators of positive quasicontractive C ₀-semigroups of operators that fulfill the Feller property. Accordingly, these semigroups are associated with a suitable probability transition function and hence with a Markov process on \mathbbR^N{{\mathbb{R}}^{N}} . An approximation formula for these semigroups is also stated in terms of iterates of integral operators that generalize the classical Gauss-Weierstrass operators. Some applications of such approximation formula are finally shown concerning both the semigroups and the associated Markov processes.