Field-theoretic simulations of polymer solutions: finite-size and discretization effects

In this work we analyze the finite-size and discretization effects that occur in field-theoretic polymer simulations. Following our previous work, we study these effects for a polymer solution in the canonical ensemble confined to a slit (with nonadsorbing walls) of width L, and focus on the behavior of two quantities: the chemical potential mu, and the correlation length xi. Our results show that the finite-size effects disappear for both quantities once the lateral size of the system L is larger than approximately 2xi. On the other hand, the chemical potential is dominated by the lattice discretization Deltax. The origins of this dependence are discussed in detail, and a scheme is proposed in which this effect is avoided. Our results also show that the density profiles do not depend on the lattice discretization if Deltax < approximately xi/4. This implies that the correlation length xi, extracted from the density profiles, is free of lattice size and lattice discretization artifacts once L is > approximately 2xi and Deltax < approximately xi/4.     

Solvothermal synthesis of silver nanoparticles from thiolates

A new solvothermal method for the synthesis of thiol-protected silver nanoparticles starting from silver thiolates is reported. The method has been tried with thiols of different chain length, such as octane and octadecane thiols, and the particle size was found to be nearly the same for both molecules. The synthesis was dependent on heating conditions and the best results were obtained when the temperature was between 180 and 200 degrees C. Addition of complexation agents such as acetyl acetone or triethylamine to the solvent did not change the product distribution significantly.     

Supramolecular Mn(II) and Mn(II)/Mn(III) grid complexes with [Mn9(mu2-O)12] core structures. Structural, magnetic, and redox properties and surface studies

A series of [3 x 3] Mn(II)(9), antiferromagnetically coupled, alkoxide-bridged, square grid complexes, derived from a group of "tritopic" dihydrazide ligands, is described. The outer ring of eight Mn(II) centers in the grids is isolated magnetically from the central Mn(II) ion, leading to an S = 0 ground state for the ring, and an S = 5/2 ground state overall in each case. Exchange in the Mn(II)(8) ring can be represented by a 1D chain exchange model. Rich electrochemistry displayed by these systems has led to the production of Mn(II)/Mn(III) mixed-oxidation-state grids by both electrochemical and chemical means. Structures are reported for [Mn(9)(2poap)(6)](C(2)N(3))(6).10H(2)O (1), [Mn(9)(2poap)(6)](2)[Mn(NCS)(4)(H(2)O)](2)(NCS)(8).10H(2)O (2), [Mn(9)(2poapz)(6)](NO(3))(6).14.5H(2)O (3), [Mn(9)(2popp)(6)](NO(3))(6).12H(2)O (4), [Mn(9)(2pomp)(6)](MnCl(4))(2)Cl(2).2CH(3)OH.7H(2)O (5), and [Mn(9)(Cl2poap)(6)](ClO(4))(9).7H(2)O (6). Compound 1 crystallized in the tetragonal system, space group P4(2)/n, with a = 21.568(1) A, c = 16.275(1) A, and Z = 2. Compound 2 crystallized in the triclinic system, space group P, with a = 25.043(1) A, b = 27.413(1) A, c = 27.538(2) A, alpha = 91.586(2) degrees, beta = 113.9200(9) degrees, gamma = 111.9470(8) degrees, and Z = 2. Compound 3 crystallized in the triclinic system, space group P, with a = 18.1578(12) A, b = 18.2887(12) A, c = 26.764(2) A, alpha = 105.7880(12) degrees, beta = 101.547(2) degrees, gamma = 91.1250(11) degrees, and Z = 2. Compound 4 crystallized in the tetragonal system, space group P4(1)2(1)2, with a = 20.279(1) A, c = 54.873(6) A, and Z = 4. Compound 5 crystallized in the tetragonal system, space group I, with a = 18.2700(2) A, c = 26.753(2) A, and Z = 2. Compound 6 crystallized in the triclinic system, space group P, with a = 19.044(2) A, b = 19.457(2) A, c = 23.978(3) A, alpha = 84.518(3) degrees, beta = 81.227(3) degrees, gamma = 60.954(2) degrees, and Z = 2. Preliminary surface studies on Au(111), with a Mn(II) grid complex derived from a sulfur-derivatized ligand, indicate monolayer coverage via gold-sulfur interactions, and the potential for information storage at high-density levels.     

Transient absorption studies and numerical modeling of iodine photoreduction by nanocrystalline TiO2 films

We have used transient absorption spectroscopy to study the reaction between photogenerated electrons in a dye-free nanocrystalline titanium dioxide film and an iodine/iodide redox couple. Recombination kinetics was measured by recording the transient optical signal following band gap excitation by a UV laser pulse. In the presence of a methanol hole scavenger in the electrolyte, a long-lived (0.1-1 s) red/infrared absorbance is observed and assigned to photogenerated electrons forming Ti(3+) species. In the presence of iodine and excess iodide in the electrolyte, the signal decays on a millisecond-microsecond time scale, assigned to reduction of the redox couple by photogenerated electrons in the TiO(2). The electron lifetime decreases inversely with increasing iodine concentration, indicating that the back reaction is first order in [I(2)]. No evidence for I(2)(-) is observed, indicating that the reaction mechanism does not involve the formation of I(2)(-) as an intermediate. The shape of the kinetics evolves from monoexponential at low [I(2)] to stretched-exponential as [I(2)] increases. A Monte Carlo continuous-time random walk model is implemented to simulate the kinetics and its [I(2)] dependence and used to address the order of the recombination reaction with respect to electron density, n. The model incorporates the diffusion of oxidized species from the electrolyte toward the TiO(2) surface as well as electron trapping and transport in the TiO(2). In the limit of low [I(2)], the monoexponential kinetics is explained by the recombination reaction being rate limited by the diffusion of the oxidized species in the electrolyte. The stretched-exponential behavior at high [I(2)] can be explained by the reaction being rate limited by the transport of electrons through a distribution of trap states toward reactive sites at the TiO(2)-electrolyte interface, similar to the mechanism proposed previously for the kinetics of electron-dye cation recombination. Such trap-limited recombination can also explain the superlinear dependence of electron recombination rate on electron density, which has been reported elsewhere, without the need for a reaction mechanism that is second order in n. In contrast, a second-order reaction mechanism in a trap-free medium cannot explain the observed kinetics, although a second-order mechanism incorporating electron trapping cannot be conclusively ruled out by the data. We propose that the most likely reaction scheme, that is first order in both [I(2)] and n, is the dissociative reduction of I(2) onto the metal oxide surface, followed by a second electron reduction of the resulting adsorbed iodine radical, and that empirical second-order behavior of the electron lifetime is most likely explained by electron trapping rather than by a second-order recombination mechanism.     

Interactions between two bubbles on a hot or cold wall

A temperature gradient normal to a planar wall produces two-dimensional motion and aggregation or separation of bubbles on the hot or cold wall, respectively. The origin of the motion is fluid convection driven by the thermal Marangoni stress on the surface of the bubbles. Previous theories for the dynamics of two or more bubbles have been based on an analysis of flow about a single bubble and the resulting convection that entrains its neighbors. Here we extend the theory by solving the quasi-steady equations for the temperature and velocity fields for two bubbles. The result is a quantitative model for the relative velocity between two bubbles as a function of both the distance between them and the gap between each bubble and the surface. Interactions between the bubbles strongly increase the approach velocity, which is counter-intuitive because the hydrodynamic resistance increases as the bubbles approach each other. An asymptotic analysis indicates the thermocapillary force bringing them together or pushing them apart is singular in the separation when the bubbles are close to each other. The two-bubble theory agrees reasonably well with the experimentally measured velocities of pairs of bubbles on hot or cold surfaces, though it slightly overestimates the velocities.     

Mass spectral fragmentation reactions of a therapeutic 4-azasteroid and related compounds

Mass spectra were acquired for a therapeutic 4-azasteroid (dutasteride), and some related compounds, using various ionization conditions (EI, CI, APCI and ESI) in both positive and negative ion modes. The ionization and fragmentation behavior of the compound dutasteride, its precursors and several analogs is reported. Positive atmospheric pressure chemical ionization (APCI+) and positive electrospray ionization (ESI+) produced distinctive collision-induced dissociation (CID) spectra for the respective [MH]+ ions of dutasteride. The spectral differences are attributed to ion populations having either different structures or different internal energy distributions (as a consequence of the method of ionization). Irrespective of their origin, the protonated molecules undergo interesting fragmentation reactions when collisionally activated. The identity of the major fragmentation products was confirmed by accurate mass measurement. The negative APCI mass spectrum of dutasteride displays extensive dehydrohalogenation, apparently due to the thermal component of the APCI process. Some of the resulting radical anions display remarkable stability toward collisional decomposition. Details of the fragmentation behavior for the negative ion species and their relationship to the positive ion results are discussed.     

Sequence‐Defined Oligomers from Hydroxyproline Building Blocks for Parallel Synthesis Applications

The functionality of natural biopolymers has inspired significant effort to develop sequence‐defined synthetic polymers for applications including molecular recognition, self‐assembly, and catalysis. Conjugation of synthetic materials to biomacromolecules has played an increasingly important role in drug delivery and biomaterials. We developed a controlled synthesis of novel oligomers from hydroxyproline‐based building blocks and conjugated these materials to siRNA. Hydroxyproline‐based monomers enable the incorporation of broad structural diversity into defined polymer chains. Using a perfluorocarbon purification handle, we were able to purify diverse oligomers through a single solid‐phase extraction method. The efficiency of synthesis was demonstrated by building 14 unique trimers and 4 hexamers from 6 diverse building blocks. We then adapted this method to the parallel synthesis of hundreds of materials in 96‐well plates. This strategy provides a platform for the screening of libraries of modified biomolecules.     

Stereoselective synthesis of (2S,3R)- and (2R,3S)-iodoreboxetine; potential SPECT imaging agents for the noradrenaline transporter

With the aim of developing a new SPECT imaging agent for the noradrenaline transporter, a twelve-step stereoselective synthesis of iodinated analogues of (2S,3R)- and (2R,3S)-reboxetine has been achieved from 4-bromobenzaldehyde. The key steps involve a Sharpless asymmetric epoxidation to establish the stereogenic centres and a copper catalysed aromatic halogen exchange reaction to introduce the key iodine atom. In vitro testing of these compounds using a [(3)H]nisoxetine displacement assay with homogenised rat brain shows both compounds to have significant affinity, with K(i) values of 320.8 nM and 58.2 nM for (2S,3R)- and (2R,3S)-iodoreboxetine respectively.     

Suzuki-Miyaura approach to JNJ-26076713, an orally active tetrahydroquinoline-containing alphaVbeta3/alphaVbeta5 integrin antagonist. enantioselective synthesis and stereochemical studies

An improved scale-up synthesis was required for the alpha(V)beta(3)/alpha(V)beta(5) integrin antagonist 1, which had demonstrated oral efficacy in eye disease models of angiogenesis and vascular permeability. A stereodefined, quinoline-substituted, unsaturated ester was conveniently prepared by a Suzuki-Miyaura coupling to facilitate exploration of multiple methods of asymmetric reduction. The catalytic chiral hydrogenation of the corresponding unsaturated acid (Z-5b) with a ruthenium-based metal precursor and the (R)-XylPhanePhos ligand proved particularly efficient and economical. The resulting (3S)-quinoline-containing intermediate was reduced to an equal mixture of tetrahydroquinoline diastereomers. The undesired diastereomer could be recycled to the desired one by an oxidation/reduction protocol. The absolute stereochemistry of 1 was established as 3S,3'S by a combination of X-ray diffraction and chemical means.