Synthesis and Characterization of a Thiophene Copolymer for Photovoltaic Application

A soluble thiophene copolymer having polar and non polar side groups was synthesized and its photovoltaics performance was investigated. The synthesized copolymer was characterized using Nuclear Magnetic Resonance (NMR) and optical spectroscopy. Dye sensitized solar cells were fabricated using this copolymer as sensitizer. An open-circuit voltage of 0.50V, a short-circuit current density of 1.195 mA/cm² and an overall power conversion efficiency of 0.3% were measured.     

Sensory Response and Two-Photon-Fluorescence Study of Regioregular Polythiophene Nanoparticles

Nanoparticles of a regioregular and soluble polythiophene were fabricated by mini-emulsion technique. The fabricated nanoparticles were characterized by optical spectroscopy and dynamic light scattering. The fluorescence quenching of these fabricated nanoparticles with 2,4-dinitrotolune (DNT) in aqueous and organic solutions was investigated. Significant fluorescence quenching was observed. The Stern-Volmer constants were determined to be higher than that of the bulk polymer in solution, indicating that the nanoparticles provide better sensitivity in DNT sensing. Strong two-photon-induced fluorescence was measured from these nanoparticles.     

Detection, quantification, and identification of dermorphin in equine plasma and urine by LC–MS/MS for doping control

Dermorphin is a unique opioid peptide that is 30–40 times more potent than morphine. It was misused and went undetected in horse racing until 2011 when intelligence obtained from a few North American race tracks suggested its use. To prevent such misuse, a reliable analytical method became necessary for detection and identification of dermorphin in post-race horse samples. This paper describes the first liquid chromatography–tandem mass spectrometry (LC–MS/MS) method for such a purpose. Equine plasma and urine samples were pre-treated with ethylenediamine tetra-acetic acid and urea prior to solid-phase extraction (SPE) on Oasis MCX cartridges. Resulting eluates were dried under vacuum and analyzed by LC–MS/MS for dermorphin. The matrix effect, SPE efficiency, intra-day and inter-day accuracy and precision, and stability of the analyte were assessed. The limit of detection was 10 pg/mL in plasma and 20 pg/mL in urine, and the limit of confirmation was 20 pg/mL in plasma and 50 pg/mL in urine. Dermorphin in plasma is stable at ambient temperature, but its diastereomer is unstable. With isotopically labeled dermorphin as an internal standard, the quantification range was 20–10,000 pg/mL in plasma and 50–20,000 pg/mL in urine. The intra-day and inter-day accuracy was from 91 % to 100 % for the low, intermediate, and high concentrations. The intra-day and inter-day coefficients of variation were less than 12 %. The method differentiates dermorphin from its diastereomer. This method is very specific for identification of dermorphin in equine plasma and urine, as assessed by BLAST search and targeted SEQUEST search, and by MS/MS spectrum library search. The method has been successfully applied to analysis of samples collected following dermorphin administration to research horses and of official post-race samples.

Splitting multiple bonds: A comparison of methodologies on the accuracy of bond dissociation energies

A benchmarking of different quantum chemical methodologies for the splitting of multiply bonded systems is presented, with an emphasis on quantitative reproduction of experimentally determined dissociation energies. New benchmark full configuration interaction (FCI) calculations are presented for nitrogen and acetylene, and comparisons are made between various methods with both the FCI results and with experiment in an effort to understand qualitatively and quantitatively how well these different methods cope with the bond‐breaking process. It is found that the multireference methods fare well, but are sometimes slowly convergent with respect to the size of the basis set, and in particular the angular momenta of the polarization functions. Single‐reference (SR) wavefunction‐based methods perform poorly against full CI, while CCSD(T) is reasonably accurate for comparison with experiment. Density functional theory with hybrid functionals have very quick basis‐set convergence, and offer reliable estimates of bond dissociation energies. Spin‐restricted SR wavefunctions are found to be poor for such systems, while unrestricted wavefunctions give reasonably good energies, but with severe spin contamination. © 2013 Wiley Periodicals, Inc.     

Understanding the acceleration in the ring-opening of lactones delivered by microwave heating

This paper reports the first detailed study focussed upon identifying the influence that microwave heating (MWH) has upon the mechanic steps involved in the tin catalysed ring-opening of lactones such as ?-caprolactone (CL). Direct comparison of conventional (CH) and microwave (MWH) heated kinetic studies showed that a key factor in the reduction of the polymerisation cycle time with MWH was the elimination of the induction period associated with in situ catalyst manufacture and initiation. NMR studies demonstrated that the most significant mechanistic change contributing to the observed induction time reduction/elimination was faster initiation (i.e., reaction of the initiatior/catalyst complex with the first monomer unit). Consequently, analysis of the dielectric properties of the reaction components predicted that this MWH induced change was related to the selective volumetric heating of both the catalyst and the monomer. Furthermore, this indication of the greater significance of the initiation step in defining the length of the induction period suggests that this is the rate determining step of the process, whether conducted by CH or MWH. Increasing the catalyst concentration was demonstrated to produce significant reductions in reaction heat-up time and to induce a significant (up to 30 °C) overshoot in reaction mixture bulk temperature in with MWH only. Thus supporting the conclusion that selective heating of the organometallic species in the system contributes directly to differences in the reaction conditions and which need to be taken into account when drawing comparisons with CH systems. Consequently, both effects were concluded to be thermally generated from selective volumetric heating.     

Development of fish gelatin-based artificial fish baits incorporating bioattractants from seafood processing waste

The study dealt with evolving an artificial fish bait by incorporating bioattractant concentrates derived from seafood processing wastes by enzymatic hydrolysis namely fish waste concentrate (FWC), squid waste concentrate (SWC), and shrimp processing concentrate (SPWC). They were characterized based on amino acid content and presence of different functional groups using FTIR. Among them, SWC was found to have the highest amino acid content of 60.85mg/100 mg followed by FWC (42.21mg/100 mg) and SPWC (24.82mg/100 mg). The developed artificial fish baits were subjected to protein leaching, solubility in seawater besides testing for acceptability by the red snapper. The study revealed that the bait incorporated with SWC at 3% level was found be the most ideal, with the protein leaching rate of 24.82 mg/g/h, solubility rate of 36.6 mg/g/h and the attractability score of 29/30. The amino acid leaching rate was 3.11 mg/h/100 mg and it was found to contain five amino acids such as glycine, proline, glutamic acid, alanine and serine. The study revealed that the hydrolyzed squid waste concentrate can be incorporated at 3% (w/w) with fish gelatin based biomatrix during gelation to prepare artificial bait.     

Batch versus Flow Photochemistry: A Revealing Comparison of Yield and Productivity

The use of flow photochemistry and its apparent superiority over batch has been reported by a number of groups in recent years. To rigorously determine whether flow does indeed have an advantage over batch, a broad range of synthetic photochemical transformations were optimized in both reactor modes and their yields and productivities compared. Surprisingly, yields were essentially identical in all comparative cases. Even more revealing was the observation that the productivity of flow reactors varied very little to that of their batch counterparts when the key reaction parameters were matched. Those with a single layer of fluorinated ethylene propylene (FEP) had an average productivity 20 % lower than that of batch, whereas three‐layer reactors were 20 % more productive. Finally, the utility of flow chemistry was demonstrated in the scale‐up of the ring‐opening reaction of a potentially explosive [1.1.1] propellane with butane‐2,3‐dione.     

Correlating Glycoforms of DC-SIGN with Stability Using a Combination of Enzymatic Digestion and Ion Mobility Mass Spectrometry

The immune scavenger protein DC-SIGN interacts with glycosylated proteins and has a putative role in facilitating viral infection. How these recognition events take place with different viruses is not clear and the effects of glycosylation on the folding and stability of DC-SIGN have not been reported. Herein, we report the development and application of a mass-spectrometry-based approach to both uncover and characterise the effects of O-glycans on the stability of DC-SIGN. We first quantify the Core 1 and 2 O-glycan structures on the carbohydrate recognition and extracellular domains of the protein using sequential exoglycosidase sequencing. Using ion mobility mass spectrometry, we show how specific O-glycans, and/or single monosaccharide substitutions, alter both the overall collision cross section and the gas-phase stability of the DC-SIGN isoforms. We find that rather than the mass or length of glycoprotein modifications, the stability of DC-SIGN is better correlated with the number of glycosylation sites.     

Reversible pH-Responsive Coacervate Formation in Lipid Vesicles Activates Dormant Enzymatic Reactions

In situ, reversible coacervate formation within lipid vesicles represents a key step in the development of responsive synthetic cellular models. Herein, we exploit the pH responsiveness of a polycation above and below its pK_a, to drive liquid–liquid phase separation, to form single coacervate droplets within lipid vesicles. The process is completely reversible as coacervate droplets can be disassembled by increasing the pH above the pK_a. We further show that pH-triggered coacervation in the presence of low concentrations of enzymes activates dormant enzyme reactions by increasing the local concentration within the coacervate droplets and changing the local environment around the enzyme. In conclusion, this work establishes a tunable, pH responsive, enzymatically active multi-compartment synthetic cell. The system is readily transferred into microfluidics, making it a robust model for addressing general questions in biology, such as the role of phase separation and its effect on enzymatic reactions using a bottom-up synthetic biology approach.