Molecular structures of THF-solvated alkali-metal 2,2,6,6-tetramethylpiperidides finally revealed: X-ray crystallographic, DFT, and NMR (including DOSY) spectroscopic studies

The often studied THF solvates of the utility alkali-metal amides lithium and sodium 2,2,6,6-tetramethylpiperidide are shown to exist in the solid state as asymmetric cyclic dimers containing a central M(2)N(2) ring and one molecule of donor per metal to give a distorted trigonal planar metal coordination. DFT studies support these structures and confirm the asymmetry in the ring. In C(6)D(12) solution, the lithium amide displays a concentration-dependent equilibrium between a solvated and unsolvated species which have been shown by diffusion-ordered NMR spectroscopy (DOSY) to be a dimer and larger oligomer, respectively. A third species, a solvated monomer, is also present in very low concentration, as proven by spiking the NMR sample with THF. In contrast, the sodium amide displays a far simpler C(6)D(12) solution chemistry, consistent with the solid-state dimeric arrangement but with labile THF ligands.     

Developing a Hetero‐Alkali‐Metal Chemistry of 2,2,6,6‐Tetramethylpiperidide (TMP): Stoichiometric and Structural Diversity within a Series of Lithium/Sodium,Lithium/Potassium and Sodium/Potassium TMP Compounds

Studied extensively in solution and in the solid state, Li(TMP) (TMP=2,2,6,6‐tetramethylpiperidide) is an important utility reagent popular as a strongly basic, weakly nucleophilic tool for C? H metallation. Recently, there has been a surge in interest in mixed metal derivatives containing the bulky TMP anion. Herein, we start to develop hetero (alkali metal) TMP chemistry by reporting the N,N,N′,N′‐tetramethylethylenediamine (TMEDA)‐hemisolvated sodium–lithium cycloheterodimer [(tmeda)Na(μ‐tmp)₂Li], and its TMEDA‐free variant [{Na(μ‐tmp)Li(μ‐tmp)}_∞], which provides a rare example of a crystallographically authenticated polymeric alkali metal amide. Experimental observations suggest that the former is a kinetic intermediate en route to the latter thermodynamic product. Furthermore, a third modification, the mixed potassium–lithium‐rich cycloheterotrimer [(tmeda)K(μ‐tmp)Li(μ‐tmp)Li(μ‐tmp)], has also been synthesised and crystallographically characterised. On moving to the bulkier tridentate donor N,N,N′,N′′,N′′‐pentamethyldiethylenediamine (PMDETA), the additional ligation forces the sodium–lithium and potassium–dilithium ring species to open giving the acyclic arc‐shaped complexes [(pmdeta)Na(μ‐tmp)Li(tmp)] and [(pmdeta)K(μ‐tmp)Li(μ‐tmp)Li(tmp)], respectively. Completing the series, the potassium–lithium and potassium–sodium derivatives [(pmdeta)K(μ‐tmp)₂M] (M=Li, Na) have also been isolated as closed structures with a distinctly asymmetric central MN₂K ring. Collectively, these seven new bimetallic compounds display five distinct structural motifs, four of which have never hitherto been witnessed in TMP chemistry and three of which are unprecedented in the vast structural library of alkali metal amide chemistry.     

A simple mathematical model for genetic effects in pneumococcal carriage and transmission

Streptococcus pneumoniae (S. pneumoniae) is a bacterium commonly found in the throat of young children. Pneumococcal serotypes can cause a variety of invasive and non-invasive diseases such as meningitis and pneumonia. In 2000 a vaccine was introduced in the USA that not only prevents vaccine type disease but has also been shown to eliminate carriage of the vaccine serotypes. One key problem with the vaccine is that it has been observed that the same sequence types (genetic material found in the serotypes) are able to manifest in more than one serotype. This is a potential problem if sequence types associated with invasive disease may express themselves in multiple serotypes.We present a basic differential equation mathematical model for exploring the relationship between sequence types and serotypes where a sequence type is able to manifest itself in one vaccine serotype and one non-vaccine serotype. An expression for the effective reproduction number is found and an equilibrium and then a global stability analysis carried out. We illustrate our analytical results by using simulations with realistic parameter values.     

Diffusion tensor fiber tractography of the olfactory tract

Magnetic resonance diffusion tensor imaging with fiber tracking is used for 3-dimensional visualization of the nervous system. Peripheral nerves and all cranial nerves, except for the olfactory tract, have previously been visualized. The olfactory tracts are difficult to depict with diffusion-weighted imaging due to the high sensitivity to susceptibility artifacts at the base of the skull. Here we report an optimized single-shot diffusion-weighted echo planar imaging sequence that can visualize the olfactory tracts with fiber tracking. Five healthy individuals were examined, and the olfactory tracts could be fiber tracked with the diffusion-weighted sequence. For comparison and as a negative control, an anosmic patient was examined. No olfactory tracts were visualized on T2-weighted nor diffusion-weighted fiber tracking images. Measuring diffusion in the olfactory tracts promise to facilitate the identification of different hyposmic and anosmic conditions.     

Chiral Phosphines: The Effect of Asymmetric Carbon Centers α or β to Phosphorus on the 31P NMR Spectra

Abstract

Chiral alkylphosphines containing asymmetric carbon centers either alpha or beta to the phosphorus are formed from the free radical addition of phosphine to prochiral olefins. The phosphorus NMR spectra of the primary phosphines have only one signal for the enantiomeric pair while the spectra of the secondary phosphines have three signals in a 1:2:1 ratio. This is the statistical ratio expected for the enantiomeric pair and two meso forms. Four enantiomeric pairs of tertiary phosphines can be formed from one prochiral olefin. One pair has alkyl groups of the same configuration while the remaining pairs have mixed configurations. The phosphorus NMR spectra show two signals in a 1:3 ratio. Dilution of the secondary phosphines with a polar solvent results in only one signal in the phosphorus NMR spectra. The chemical shifts and diluent effect can be explained in terms of the gamma shielding effect (1).     

Ferromagnetic ordering in bisthiaselenazolyl radicals: variations on a tetragonal theme

A series of five isostructural bisthiaselenazolyl radicals 2 have been prepared and characterized by X-ray crystallography. The crystal structures, all belonging to the tetragonal space group P42(1)m, consist of slipped pi-stack arrays of undimerized radicals packed about 4 centers running along the z-direction, an arrangement which gives rise to a complex lattice-wide network of close intermolecular Se---Se' contacts. Variations in R1 (Et, Pr, CH2CF3) with R2 = Cl lead to significant changes in the degree of slippage of the pi-stacks and hence the proximity of the Se---Se' interactions. By contrast, variations in R2 (Cl, Br, Me) with R1 = Et induce very little change in either the degree of slippage or the intermolecular contacts. Variable-temperature conductivity (sigma) measurements show relatively constant values for the conductivity sigma(300 K) (10(-5)-10(-4) S cm(-1)) and thermal activation energy E(act) (0.27-0.31 eV). Variable-temperature magnetic susceptibility measurements indicate that radicals 2b and 2c (R1 = Pr, CH2CF3; R2 = Cl) behave as weakly antiferromagnetically coupled Curie-Weiss paramagnets, but in 2a, 2d and 2e (R1 = Et; R2 = Cl, Me, Br) ferromagnetic ordering is observed, with T(c) values of 12.8 (R2 = Cl), 13.6 (R2 = Me), and 14.1 K (R2 = Br). The origin of the dramatically different magnetic behavior across the series has been explored in terms of a direct through-space mechanism by means of DFT calculations on individual pairwise exchange energies. These indicate that antiferromagnetic exchange between radicals along the pi-stacks increases with pi-stack slippage.     

Noncovalent interactions under extreme conditions: high-pressure and low-temperature diffraction studies of the isostructural metal-organic networks (4-chloropyridinium)2[CoX4] (X = Cl, Br)

The crystal structures of the two isostructural metal-organic salts, (4-chloropyridinium) 2[CoX 4], X = Cl ( 1), Br ( 2), have each been determined at nine temperatures from 30 to 300 K and at nine pressures from atmospheric pressure to 4.2 GPa. A 5% reduction in unit cell volume is observed upon temperature reduction, whereas an 18-19% reduction is observed upon increasing the pressure over the ranges studied. The structures adopt a tape arrangement propagated by bifurcated N-H...X 2Co hydrogen bonds and by Co-X...Cl-C halogen bonds. Intertape interactions include type I Co-X...Cl-C and C-Cl...Cl-C halogen-halogen interactions as well as offset pi-stacking between the aromatic rings of the cations. Although little anisotropy in compression is seen upon temperature reduction, marked anisotropy in compression is observed upon pressure increase. Compression between tapes far exceeds compression along the tape, consistent with the strong attractive nature of the intratape N-H...X 2Co and Co-X...Cl-C interactions and the weaker dispersion dominated Co-X...Cl-C and C-Cl...Cl-C halogen-halogen interactions and pi-stacking interactions. Increased distortion of the [CoX 4] (2-) anions from idealized tetrahedral geometry arises upon pressure increase, consistent with local changes in the electric field that result from compression of the pairs of pi-stacked cations. The study of the isostructural pair of compounds permits a rare opportunity for quantitative evaluation of the "internal" or "chemical" pressure exerted by changing the [CoBr 4] (2-) anion for the smaller [CoCl 4] (2-) anion. Thus, crystal structures of 1 and 2 with equivalent unit cell volumes require an additional pressure of ca. 1 GPa exerted upon the structure containing the larger [CoBr 4] (2-) anion ( 2). This internal pressure increases to ca. 1.9 GPa at the highest pressures used in this study. Most significant is that examination of the isovolumetric pairs of structures shows that the structures containing the [CoCl 4] (2-) anion are contracted along the <101> vector, the direction of tape propagation, by ca. 1.2% and correspondingly expanded in other directions, relative to those containing the [CoBr 4] (2-) anion. Since the effect of difference in anion size has been removed by application of pressure, this anisotropy in dimensions clearly indicates that the N-H...X 2Co hydrogen bonds and Co-X...Cl-C halogen bonds are more strongly attractive for X = Cl rather than X = Br. Use of internal pressure thereby provides unique insight into the relative strength of intermolecular interactions.     

Solvation of O(2)(-) and O(4)(-) by p-difluorobenzene and p-xylene studied by photoelectron spectroscopy

Anion photoelectron spectra of the O(2)(-) . arene and O(4)(-) . arene complexes with p-xylene and p-difluorobenzene are presented and analyzed with the aid of calculations on the anions and corresponding neutrals. Relative to the adiabatic electron affinity of O(2), the O(2)(-) . arene spectra are blueshifted by 0.75-1 eV. Solvation energy alone does not account for this shift, and it is proposed that a repulsive portion of the neutral potential energy surface is accessed in the detachment, resulting in dissociative photodetachment. O(2)(-) is found to interact more strongly with the p-difluorobenzene than the p-xylene. The binding motif involves the O(2)(-) in plane with the arene, interacting via electron donation along nearby C-H bonds. A peak found at 4.36(2) eV in the photoelectron spectrum of O(2)(-) . p-difluorobenzene (p-DFB) is tentatively attributed to the charge transfer state, O(2)(-) . p-DFB(+). Spectra of O(4)(-) . arene complexes show less blueshift in electron binding energy relative to the spectrum of bare O(4)(-), which itself undergoes dissociative photodetachment. The striking similarity between the profiles of the O(4)(-) . arene complexes with the O(4)(-) spectrum suggests that the O(4)(-) molecule remains intact upon complex formation, and delocalization of the charge across the O(4)(-) molecule results in similar structures for the anion and neutral complexes.     

Ni[(EPiPr2)2N]2 complexes: stereoisomers (E = Se) and square-planar coordination (E = Te)

The reaction of ((i)Pr 2PE) 2NM.TMEDA (M = Li, E = Se; M = Na, E = Te) with NiBr 2.DME in THF affords Ni[(SeP (i)Pr 2) 2N] 2 as either square-planar (green) or tetrahedral (red) stereoisomers, depending on the recrystallization solvent; the Te analogue is obtained as the square-planar complex Ni[(TeP (i)Pr 2) 2N] 2.     

Comparison of different water-miscible solvents for the preparation of plasma and urine samples in metabolic profiling studies

The Lowry method and a capillary electrophoresis method were used to analyse protein residues in the supernatant after solvent deproteination of plasma. Acetonitrile and acetone were much more effective than methanol and ethanol at reducing the levels of proteins in plasma. The ability of different solvents to decrease levels of phospholipids in plasma samples was assessed using electrospray ionisation mass spectrometry (MS). Phospholipid signals can obscure differences between samples in general metabolite profiling (i.e. non-target compound) studies. Acetonitrile was much more effective than methanol in reducing the MS signal due to phospholipids in plasma which is a consequence of the poor solubility of phospholipids in acetonitrile. The capability of the solvents at reducing salts in urine samples was also studied by using an amperometric method. Using this approach little difference was detected between methanol, ethanol, acetonitrile and acetone in their ability to desalt urine samples.