Asymmetric synthesis of (−)-fosfomycin and its trans-(1S,2S)-diastereomer using a biocatalytic reduction as the key step

Fosfomycin is a gram positive and gram negative antibiotic that contains an asymmetric epoxide. An enzyme library was screened for its ability to reduce dimethyl(1-chloro-2-oxopropyl)phosphonate to the corresponding asymmetric chlorohydrin. Homology models were built in MOE, which were shown to accurately model the enzyme–substrate complex displaying the stereoselectivity that we observed. Two enzymes, YDR368w and YHR104w, were chosen for the scale up and synthesis of fosfomycin and its trans-(1S,2S)-diastereomer.     

Innovative Measurement Techniques in Surface Science

We describe four new experimental techniques advanced during the last decade in the authors’ laboratory. The techniques include photon scanning tunneling microscopy; aberration‐corrected low‐energy electron microscopy in combination with photoelectron emission microscopy, microcalorimetry, and electron‐spin resonance spectroscopy. It is demonstrated how those techniques may be applied to solve fundamental problems in surface science with growing demands to tackle complex nanoscopic systems, and, in particular in catalysis science, which, without the availability of those techniques, would be difficult if not impossible to address.     

Sur les sous-groupes nilpotents du groupe de Cremona

Résumé. Nous décrivons les sous-groupes nilpotents non virtuellement abéliens du groupe des transformations birationnelles du plan projectif complexe: un tel groupe est d'ordre fini ou virtuellement métabélien.      

Multi-funnel optimization using Gaussian underestimation

In several applications, underestimation of functions has proven to be a helpful tool for global optimization. In protein–ligand docking problems as well as in protein structure prediction, single convex quadratic underestimators have been used to approximate the location of the global minimum point. While this approach has been successful for basin-shaped functions, it is not suitable for energy functions with more than one distinct local minimum with a large magnitude. Such functions may contain several basin-shaped components and, thus, cannot be underfitted by a single convex underestimator. In this paper, we propose using an underestimator composed of several negative Gaussian functions. Such an underestimator can be computed by solving a nonlinear programming problem, which minimizes the error between the data points and the underestimator in the L ¹ norm. Numerical results for simulated and actual docking energy functions are presented.     

C-terminal processing of yeast Spt7 occurs in the absence of functional SAGA complex

Background  

Spt7 is an integral component of the multi-subunit SAGA complex that is required for the expression of ~10% of yeast genes. Two forms of Spt7 have been identified, the second of which is truncated at its C-terminus and found in the SAGA-like (SLIK) complex.     

Acoustic cues to lexical segmentation: a study of resynthesized speech

It has been posited that the role of prosody in lexical segmentation is elevated when the speech signal is degraded or unreliable. Using predictions from Cutler and Norris' [J. Exp. Psychol. Hum. Percept. Perform. 14, 113-121 (1988)] metrical segmentation strategy hypothesis as a framework, this investigation examined how individual suprasegmental and segmental cues to syllabic stress contribute differentially to the recognition of strong and weak syllables for the purpose of lexical segmentation. Syllabic contrastivity was reduced in resynthesized phrases by systematically (i) flattening the fundamental frequency (F0) contours, (ii) equalizing vowel durations, (iii) weakening strong vowels, (iv) combining the two suprasegmental cues, i.e., F0 and duration, and (v) combining the manipulation of all cues. Results indicated that, despite similar decrements in overall intelligibility, F0 flattening and the weakening of strong vowels had a greater impact on lexical segmentation than did equalizing vowel duration. Both combined-cue conditions resulted in greater decrements in intelligibility, but with no additional negative impact on lexical segmentation. The results support the notion of F0 variation and vowel quality as primary conduits for stress-based segmentation and suggest that the effectiveness of stress-based segmentation with degraded speech must be investigated relative to the suprasegmental and segmental impoverishments occasioned by each particular degradation.     

Structural Insights into the Incorporation of the Mo Cofactor into Sulfite Oxidase from Site‐Directed Spin Labeling

Mononuclear molybdoenzymes catalyze a broad range of redox reactions and are highly conserved in all kingdoms of life. This study addresses the question of how the Mo cofactor (Moco) is incorporated into the apo form of human sulfite oxidase (hSO) by using site‐directed spin labeling to determine intramolecular distances in the nanometer range. Comparative measurements of the holo and apo forms of hSO enabled the localization of the corresponding structural changes, which are localized to a short loop (residues 263–273) of the Moco‐containing domain. A flap‐like movement of the loop provides access to the Moco binding‐pocket in the apo form of the protein and explains the earlier studies on the in vitro reconstitution of apo‐hSO with Moco. Remarkably, the loop motif can be found in a variety of structurally similar molybdoenzymes among various organisms, thus suggesting a common mechanism of Moco incorporation.     

A Zinc Oxide Carbon Nanotube Based Sensor for In Situ Monitoring of Hydrogen Peroxide in Swimming Pools

Zinc oxide nanoparticles were tethered to carbon nanotubes to form an electrochemical sensing composite, which was characterized using transmission electron microscopy, and X‐ray photoelectron and attenuated total reflectance infrared spectroscopies. The sensor′s electrocatalytic response for measuring hydrogen peroxide was investigated using cyclic voltammetry and chronoamperometry in a dynamic, well defined swimming pool environment. A wide, linear response in the concentration range of 0.025–7.0 mM at a potential of ?0.360 V was shown, with rapid response time (<5 s). The sensor had excellent reproducibility, exhibited stability and selectivity, and was able to measure concentrations in a dynamic environment as they varied.     

Diketopyrrolopyrrole‐Porphyrin Conjugates with High Two‐Photon Absorption and Singlet Oxygen Generation for Two‐Photon Photodynamic Therapy

Two‐photon photodynamic therapy is a promising therapeutic method which requires the development of sensitizers with efficient two‐photon absorption and singlet‐oxygen generation. Reported here are two new diketopyrrolopyrrole‐porphyrin conjugates as robust two‐photon absorbing dyes with high two‐photon absorption cross‐sections within the therapeutic window. Furthermore, for the first time the singlet‐oxygen generation efficiency of diketopyrrolopyrrole‐containing systems is investigated. A preliminary study on cell culture showed efficient two‐photon induced phototoxicity.