Analytische Aspekte der Oxydation organischer Stickstoffverbindungen mit Chromsäure. XXIII

Zusammenfassung Die früher beschriebene Halbmikromethode zur Bestimmung von Isonitrosogruppen in organischen Verbindungen wurde in den Mikromaßstab übergeführt. Sie beruht auf der Reaktion der Substanz mit Eisen(III)-sulfat in verd. Schwefelsäure. Dabei wird der Oximstickstoff als Distickstoffoxid frei, das mit Kupfer zu elementarem Stickstoff reduziert und im Mikroazotometer gemessen wird. Für die Berechnung des Oximstickstoffgehaltes aus den abgelesenen Gasvolumina wurden Werte für die konstante und proportionale Volumenkorrektur mit Hilfe der Methode der Regressionsgeraden experimentell festgestellt. Beide Werte sind den bei der N-N-Gruppenbestimmung benützten Volumenkorrekturen fast gleich. Die Bestimmung von Oximgruppen ist durch die Anwesenheit von Nitro- oder Aminogruppen nicht gestört. Diese Gruppen können aus derselben Einwaage durch nachfolgende Oxydation mit Chromsäure bestimmt werden.

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Analytical aspects of the oxidation of organic nitrogen compounds with chromic acid. XXIII

Summary The semimicro method previously described for the determination of isonitroso groups in organic compounds has been converted to the microscale. It is based on the reaction of the material with iron(III)-sulfate in dilute sulfuric acid. The oxime nitrogen is thus liberated as dinitrogen oxide, which is reduced to elementary nitrogen by copper and measured in the mieroazotometer. To calculate the oxime nitrogen content from the read-off gas volume, values for the constant and proportional volume correction with the aid of the regression lines were established experimentally. Both values are almost equal in the case of the determination of the volume corrections employed in the determination of the N-N-groups. The presence of nitro-or amino groups does not interfere with the determination of oxime groups. These groups may be determined from the same sample by subsequent oxidation with chromic acid.

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XXII. Mitteilung s.¹.     

A reoptimization of the five-site water potential (TIP5P) for use with Ewald sums

The five-site transferable interaction potential (TIP5P) for water is most accurate at reproducing experimental data when used with a simple spherical cutoff for the long-ranged electrostatic interactions. When used with other methods for treating long-ranged interactions, the model is considerably less accurate. With small modifications, a new TIP5P-like potential can be made which is very accurate for liquid water when used with Ewald sums, a more physical and increasingly more commonly used method for treating long-ranged electrostatic interactions. The new model demonstrates a density maximum near 4 degrees C, like the TIP5P model, and otherwise is similar to the TIP5P model for thermodynamic, dielectric, and dynamical properties of liquid water over a range of temperatures and densities. An analysis of this and other commonly used water models reveals how the quadrupole moment of a model can influence the dielectric response of liquid water.     

Sites of protonation in phenothiazines: Methane and ammonia chemical ionization mass spectra

Positive ion methane and ammonia chemical ionization mass spectra for ten phenothiazine derivatives are reported. The fragmentations observed in the chemical ionization mass spectra are rationalized in terms of the location of the added proton. High-resolution measurements are used to confirm empirical formulae of the ions in the mass spectra. Changes in the mass spectra with a change in the chemical ionization reagent gas from methane to ammonia are described. A comparison with positive ion secondary ion mass spectra of the same compounds show that the amount of fragmentation is higher in the secondary ion mass spectra, but the same types of ions are observed in spectra produced by both ionization methods.     

On the expansion of hole in main chain polymers determined by positron annihilation

The temperature dependence of positron annihilation characteristics, ₃ andI ₃, has been studied on sample of poly(butadiene), poly(isobutylene) and poly(chloroprene). The temperature range was between 15 and 470 K. The rate of expansion of holes or free-volume in all samples was deduced belowT _g as well aboveT _g as appr. 3·10^–3 K^–1 and 2·10^–2 K^–1, respectively. These values are very close to the rate of the mean squared displacement of scatterer<r ²>observed in neutron scattering experiments. A possibility to use an inverse value of free-volume,V _f ^–1 for study of viscoelastic state of polymers is demonstrated.     

An evaluation of molecular models of the cytochrome P450 Streptomyces griseolus enzymes P450SU1 and P450SU2

Summary P450SU1 and P450SU2 are herbicide-inducible bacterial cytochrome P450 enzymes from Streptomyces griseolus. They have two of the highest sequence identities to camphor hydroxylase (P450cam from Pseudomonas putida), the cytochrome P450 with the first known crystal structure. We have built several models of these two proteins to investigate the variability in the structures that can occur from using different modeling protocols. We looked at variability due to alignment methods, backbone loop conformations and refinement methods. We have constructed two models for each protein using two alignment algorithms, and then an additional model using an identical alignment but different loop conformations for both buried and surface loops. The alignments used to build the models were created using the Needleman-Wunsch method, adapted for multiple sequences, and a manual method that utilized both a dotmatrix search matrix and the Needleman-Wunsch method. After constructing the initial models, several energy minimization methods were used to explore the variability in the final models caused by the choice of minimization techniques. Features of cytochrome P450cam and the cytochrome P450 superfamily, such as the ferredoxin binding site, the heme binding site and the substrate binding site were used to evaluate the validity of the models. Although the final structures were very similar between the models with different alignments, active-site residues were found to be dependent on the conformations of buried loops and early stages of energy minimization. We show which regions of the active site are the most dependent on the particular methods used, and which parts of the structures seem to be independent of the methods.     

Distributed data parallel coupled-cluster algorithm: Application to the 2-hydroxypyridine/2-pyridone tautomerism

The recently developed parallel coupled-cluster algorithm of Rendell, Lee, and Lindh [Chem. Phys. Lett., 194 , 84 (1992)] is extended to allow four-indexed quantities containing one or two indices in the virtual orbital space to be stored across the global memory of distributed-memory parallel processors. Quantities such as the double-excitation amplitudes can now be distributed over multiple nodes, with blocks of data retrieved from remote nodes by the use of interrupt handlers. As an application of the new code, we have investigated the potential energy surface of the 2-hydroxypyridine/2-pyridone tautomers. Using large basis sets, the structure of each tautomer and the transition state connecting the two minima has been determined at the SCF level. The relative energy difference and the activation energy were then redetermined using the MP2, CCSD, and CCSD(T) methods. All calculations have been performed on Intel distributed-memory supercomputers. The largest coupled-cluster calculations contained over 2 million double-excitation amplitudes. © John Wiley & Sons, Inc.     

Flexibility in the partial reduction of 2,5-disubstituted pyrroles: application to the synthesis of DMDP

[reaction: see text] The partial reduction of electron-deficient 2,5-disubstituted pyrroles has been developed into a flexible procedure that gives control of relative stereochemistry by variation of the reduction conditions. After the reaction, the pyrroline products were dihydroxylated at C-3,4 to give either the cis or trans isomers; this flexibility means that a variety of polyhydroxylated pyrrolidines can be prepared in a short sequence. Finally, this method was applied to a synthesis of the naturally occurring glycosidase inhibitor DMDP.     

An efficient and highly flexible synthesis of (α),β-unsaturated γ-oxoesters

Siloxy substituted methyl cyclopropanecar?ylates are cleaved by bromine to afford α-bromo-γ-oxoester and, after treatment with triethylamine, good yields of α,β-unsaturated γ-oxoesters.     

A Large Volume Injection Procedure for GC-MS Determination of PAHs and PCBs

A simple on-column injection system for large volume of liquid samples for the GC-MS determination of traces of PAHs and PCBs has been investigated. A deactivated fused silica capillary 20 m × 0.53 mm I.D. and 2 meters of an HP5 column (0.53 mm,1 m film thickness) were used as retention gaps. Injection volumes of 80 L for PAHs and 90 L for PCBs, allow determination of 5–50 ng L^–1 PAHs and 11–44 ng L^–1 PCBs in hexane solution with an RSD of < 10%. The method has been used for the determination of PCBs and PAHs in soil sample.