Disposable microfluidic ELISA for the rapid determination of folic acid content in food products

A micro-analytical system for rapid and quantitative analysis by inhibition immunoassay is presented and applied to the detection of folic acid. Eight polymer microchannels of 65-nL volume each and containing microelectrodes are embedded in a cartridge so that they can be operated simultaneously. All fluidic steps as well as the amperometric detection in the channels are operated by an instrument and software developed in-house. The fluidic steps of the immunoassay occur through hydrodynamic loading of the different solutions through the channels. The speed and duration of the flow and incubation parameters can thus be adapted to the biological and testing requirements. The effectiveness of the system was demonstrated by analysing folic acid concentrations in real infant formula samples within 5 min. In an effort to get a fully monitored assay, each fluidic step is monitored thanks to continuous amperometric detection of oxygen in the microchannel.     

A Selective α-L-Fucosidase Inhibitor Based on an Aminocyclopentane Framework

(1R,2R,3R,4S,5R)-4-amino-5-methylcyclopentane-1,2,3-triol ( 1 ) was prepared stereoselectively from D -ribose (Scheme). Aminocyclopentanetriol 1 , which by its design may be considered an analog of the fucosyl cation, inhibits α-L -fucosidase selectively (K_i=28 μM ) over α- and β-glucosidase, α- and β-mannosidase, and α- and β-galactosidase (Table).     

Aminocyclopentitol Inhibitors of α‐L‐Fucosidases

Aminocyclopentitol analogs of α‐L ‐fucose were synthesized stereoselectively from D ‐ribose. Alkyl substituents were attached at the NH₂ group to mimic the glycosidic leaving group. The resulting (alkylamino)cyclopentitols inhibited α‐L ‐fucosidases selectively with inhibition constants in the range of K_i=10⁻⁷ M . Comparisons with stereoisomers and acyclic analogs showed that this inhibition only occurs with N‐alkyl substitution and proper configuration at the cyclopentane, as expected for transition‐state‐analog‐type inhibition. These observations were supported by molecular‐modeling comparisons between inhibitor and transition state.     

A Chemogenetic Approach for the Optical Monitoring of Voltage in Neurons

Optical monitoring of neuronal voltage using fluorescent indicators is a powerful approach for the interrogation of the cellular and molecular logic of the nervous system. Herein, a semisynthetic tethered voltage indicator (STeVI1) based upon nile red is described that displays voltage sensitivity when genetically targeted to neuronal membranes. This environmentally sensitive probe allows for wash‐free imaging and faithfully detects supra‐ and sub‐threshold activity in neurons.     

Hydrogenic systems,frequency standards and fundamental constants

Hydrogenic (two-body) systems are the only atomic systems for which uncertainties in calculations of the energy levels approach the current state of the art in frequency measurement. This article discusses progress in the theory and measurement of transition frequencies in hydrogenic systems. These studies have relevance to the determination of fundamental constants and the testing of physical theories, especially quantum electrodynamics. A set of high accuracy calculable frequency standards could also be realized by using hydrogenic systems.     

Peptide and glycopeptide dendrimer apple trees as enzyme models and for biomedical applications

Solid phase peptide synthesis (SPPS) provides peptides with a dendritic topology when diamino acids are introduced in the sequences. Peptide dendrimers with one to three amino acids between branches can be prepared with up to 38 amino acids (MW ~ 5,000 Da). Larger peptide dendrimers (MW ~ 30,000) were obtained by a multivalent chloroacetyl cysteine (ClAc) ligation. Structural studies of peptide dendrimers by CD, FT-IR, NMR and molecular dynamics reveal molten globule states containing up to 50% of α-helix. Esterase and aldolase peptide dendrimers displaying dendritic effects and enzyme kinetics (k(cat)/k(uncat) ~ 10(5)) were designed or discovered by screening large combinatorial libraries. Strong ligands for Pseudomonas aeruginosa lectins LecA and LecB able to inhibit biofilm formation were obtained with glycopeptide dendrimers. Efficient ligands for cobalamin, cytotoxic colchicine conjugates and antimicrobial peptide dendrimers were also developed showing the versatility of dendritic peptides. Complementing the multivalency, the amino acid composition of the dendrimers strongly influenced the catalytic or biological activity obtained demonstrating the importance of the "apple tree" configuration for protein-like function in peptide dendrimers.     

Formal synthesis of dictyostatin and synthesis of two dictyostatin analogues

A formal convergent synthesis of dictyostatin from (R)-Roche ester is described. Synthetic highlights include a Ni-catalyzed Nozaki-Hiyama-Kishi coupling between an aldehyde and a Z vinyl iodide to assemble the two main fragments, a diastereoselective Myers alkylation, a stereoselective Evans aldolization, two asymmetric Duthaler crotyltitanations, and a stereoselective Pd-catalyzed Marshall allenylindium addition to install the stereogenic centers of dictyostatin. The synthesis of (9R)-epi-dictyostatin and a new ring-contracted dictyostatin isomer were also achieved.     

Visualisation and subsets of the chemical universe database GDB-13 for virtual screening

Abstract  

The chemical universe database GDB-13, which enumerates 977 million organic molecules up to 13 atoms of C, N, O, S and Cl following simple chemical stability and synthetic feasibility rules, represents a vast reservoir for new fragments. GDB-13 was classified using the MQN-system discussed in the preceding paper for the analysis of PubChem fragments. Two hundred and fifty-five subsets of GDB-13 were generated by the combinatorial use of eight restrictive criteria, including fragment-like (“rule of three”) and scaffold-like (no acyclic carbon atoms) filters. Virtual screening for analogs of 15 commercial drugs of 13 non-hydrogen atoms or less shows that retrieving MQN-neighbors of a query molecule from GDB-13 or its subsets provides on average a 38-fold enrichment in structural analogs (Daylight-type substructure fingerprint Tanimoto T _SF > 0.7), and a 75-fold enrichment in shape-similar analogs (ROCS TanimotoCombo score > 1.4). An MQN-searchable version of GDB-13 is provided at .