Rhodopsin Activation Switches in a Native Membrane Environment†

The elucidation of structure–function relationships of membrane proteins still poses a considerable challenge due to the sometimes profound influence of the lipid bilayer on the functional properties of the protein. The visual pigment rhodopsin is a prototype of the family of G protein‐coupled transmembrane receptors and a considerable part of our knowledge on its activation mechanisms has been derived from studies on detergent‐solubilized proteins. This includes in particular the events associated with the conformational transitions of the receptor from the still inactive Meta I to the Meta II photoproduct states, which are involved in signaling. These events involve disruption of an internal salt bridge of the retinal protonated Schiff base, movement of helices and proton uptake from the solvent by the conserved cytoplasmic E(D)RY network around Glu134. As the equilibria associated with these events are considerably altered by the detergent environment, we set out to investigate these equilibria in the native membrane environment and to develop a coherent thermodynamic model of these activating steps using UV–visible and Fourier‐transform infrared spectroscopy as complementary techniques. Particular emphasis is put on the role of protonation of Glu134 from the solvent, which is a thermodynamic prerequisite for full receptor activation in membranes, but not in detergent. In view of the conservation of this carboxylate group in family A G protein‐coupled receptors, it may also play a similar role in the activation of other family members.     

Relationship between the Molecular Structure of Cyanine Dyes and the Vibrational Fine Structure of their Electronic Absorption Spectra

Vibronic sub‐bands in the electronic absorption spectra of symmetrical cyanine dyes (see picture) are attributed to the symmetric C? C valence vibration of the polymethine chain in the excited state. The ³J(H,H) coupling constants in the polymethine chain can be used to characterize the bond localization within the chain in the ground state and thus to explain the intensity distribution of the sub‐bands.

     

Electro-catalytic oxidative cleavage of lignin in a protic ionic liquid

Lignin is a component of lignocellulosic biomass and a promising matrix for recovering important renewable aromatic compounds. We present a new approach of electro-oxidative cleavage of lignin, dissolved in a special protic ionic liquid, using an anode with particular electro-catalytic activity. As appropriate ionic liquid triethylammonium methanesulfonate was identified, synthesised, explored for dissolution of alkali-lignin and used for electrolysis of 5 wt.% lignin solutions. As appropriate anode material, oxidation-stable ruthenium-vanadium-titanium mixed oxide electrodes were prepared and explored for their electro-catalytic activity. The electrolysis was performed at several potentials in the range from 1.0 V to 1.5 V (vs. an Ag pseudo reference electrode). A wide range of aromatic fragments was identified as cleavage products by means of GC-MS and HPLC measurements.     

Poly(acrylic acid)-poly(ethylene glycol) layers on positively charged surface coatings: molecular structure, protein resistance, and application to single protein deposition

A new copolymer (PAA-PEG2000) has been designed, consisting of a negatively charged poly(acrylic acid) (PAA) backbone to which poly(ethylene glycol) (PEG) side chains with a molecular weight of about 2 kDa were grafted in a molecular ratio of 3:10. It readily adsorbs to positively charged surfaces and may be considered to be the anionic counterpart of PEG-grafted poly(l-lysine) (PLL-PEG), which was first described by Kenausis et al. and is widely used to render negatively charged surfaces protein-resistant. The synthesis of PAA-PEG2000 can be carried out in aqueous solution at room temperature and does not require any sophisticated techniques such as handling in an inert gas atmosphere. Using ellipsometry and infrared reflection absorption spectroscopy (IRRAS), the film structure has been carefully analyzed for copolymer adsorption onto three different positively charged surfaces, namely, thin layers of poly(allylamine) (PAH), poly(ethyleneimine) (PEI) and (3-aminopropyl)triethoxysilane (APTES). Besides the film thickness, the conformation of the PEG chains and their orientation with respect to the surface normal appear to be important parameters for the protein resistance of the films. Although PAA-PEG2000 adsorbed to PAH and PEI renders the surfaces inert, only partial protein resistance has been observed if the copolymer is deposited on APTES. In a model application, we have generated heterogeneous surfaces composed of isolated small Au nanoparticles (AuNP's) embedded in a protein-resistant layer of PAA-PEG2000 and demonstrated that the AuNP's can serve as adsorption sites for single protein species. In the future, these nanopatterned surfaces may be used for the investigation of isolated proteins.     

A comparative study of the luminescence characteristics of polymineral fine grains and coarse-grained K- and Na-rich feldspars

The IRSL and post-IR IRSL (pIRIR) signal characteristics of polymineral fine grains are investigated and compared with those of K- and Na-rich feldspar extracts. TL signal loss after IR and pIRIR stimulations occurs mainly at around 320 °C for polymineral and Na-feldspar samples and around 410 °C for K-feldspar samples, when a preheat temperature of 250 °C for 60 s is used. After preheating to a higher temperature (320 °C for 60 s) all samples show a TL reduction around 410 °C in the blue detection window. Pulse annealing experiments for IRSL and pIRIR signals for preheats between 320 °C and 500 °C indicate that the signal stabilities are similar among the different feldspar types, when a higher preheat temperature (>320 °C) is used. Thermal activation energies for IRSL and pIRIR signals are largest in K-feldspar and smallest in polymineral fine grains, in both blue and UV detection windows for both fast time-resolved (TR) and continuous wave (CW) signals. These results suggest that IRSL and pIRIR signals in polymineral fine grains originate mainly from Na-feldspar grains; these signals are less thermally stable than those from K-feldspar, but a more stable signal (presumably from K-feldspar grains) can be obtained using a higher preheat temperature.     

Sorption and separation of CO2 via nanoscale AlO(OH) hollow spheres

The CO(2) uptake on nanoscale AlO(OH) hollow spheres (260 mg g(-1)) as a new material is comparable to that on many metal-organic frameworks although their specific surface area is much lower (530 m(2) g(?1)versus 1500-6000 m(2) g(?1)). Suited temperature-pressure cycles allow for reversible storage and separation of CO(2) while the CO(2) uptake is 4.3-times higher as compared to N(2).     

CFD-simulation of a circulating fluidized bed riser

In the current work,a model of the fluid mechanics in the riser of a circulating fluidized bed(CFB)has been implemented using computational fluid dynamics(CFD).The model developed shall be used in future as the basis of 3D-reactor model for the simulation of large scale CFB combustors.The two-fluid model(TFM)approach is used to represent the fluid mechanics involved in the flow.The computational implementation is accomplished by the commercial software FLUENT.Different closure formulations are tested on a simplified geometry.Two different turbulence formulations,namely the swirl modified RNG k–εmodel and the Realizable k–εmodel,are tested in combination with two different approaches to solid phase turbulence,namely the dispersion and per phase approach.One focus of the current work is put on the study of different drag correlations.Besides the drag correlations by Syamlal et al.[Syamlal,M.,Rogers, W.,O’Brien,T.J.(1993).MFIX documentation theory guide.Technical Report DOE/METC-94/1004,U.S. Department of Energy(DOE).Morgantown Energy Technology Center:Morgantown,WV]and Gidaspow [Gidaspow,D.(1994).Multiphase flow and fluidization.New York:Academic Press]the EMMS model has been used to determine the momentum exchange between the two phases.The resulting formulation is then used to simulate a 1-m×0.3-m cold CFB setup and is validated by experimental results[Schlichthrle, P.(2000).Fluid dynamics and mixing of solids and gas in the bottom zone of circulating fluidized beds. Unpublished doctoral dissertation,Technische Universitaet Hamburg-Harburg,Shaker Verlag:Aachen].     

Three Saponins, a Steroid, and a Flavanol Glycoside from Achyrantes aspera

Summary.  Three bisdesmosidic saponins, 20-hydroxyecdysone, and quercetin-3-O-β-D-galactoside were isolated from the methanol extract of the aerial parts of Achyranthes aspera L. (Amaranthaceae). Their structures were established on the basis of NMR spectroscopic analysis; the complete ¹H and ¹³C assignments of the compounds were achieved by means of 2D NMR studies. Received July 21, 1999. Accepted August 26, 1999     

Ion Channels as Sensing Elements-Investigations by Patch-Clamp Technique

Ion channels are transmembrane proteins. Their high recognition capability together with an intrinsic amplification effects makes them outstanding candidates as constituents of biosensors. The patch-clamp technique is an extremely powerful and versatile method for studying the functioning of ion channels reconstituted into biological or synthetic membranes. Two well characterized types of natural ion channels were studied, (i) the simple transmembrane protein gramicidin A and (ii) the rather complex ligand-gated nicotinic acetylcholine receptor.