Aromatic interactions impact ligand binding and function at serotonin 5-HT2C G protein-coupled receptors: receptor homology modelling,ligand docking,and molecular dynamics results validated by experimental studies

The serotonin (5-hydroxytryptamine, 5-HT) 5-HT₂ G protein-coupled receptor (GPCR) family consists of types 2A, 2B, and 2C that share ～75% transmembrane (TM) sequence identity. Agonists for 5-HT_2C receptors are under development for psychoses; whereas, at 5-HT_2A receptors, antipsychotic effects are associated with antagonists – in fact, 5-HT_2A agonists can cause hallucinations and 5-HT_2B agonists cause cardiotoxicity. It is known that 5-HT_2A TM6 residues W6.48, F6.51, and F6.52 impact ligand binding and function; however, ligand interactions with these residues at the 5-HT_2C receptor have not been reported. To predict and validate molecular determinants for 5-HT_2C-specific activation, results from receptor homology modelling, ligand docking, and molecular dynamics simulation studies were compared with experimental results for ligand binding and function at wild type and W6.48A, F6.51A, and F6.52A point-mutated 5-HT_2C receptors.     

The optimisation of ultrasonic cleaning procedures for dairy fouled ultrafiltration membranes

Ultrafiltration (UF) of whey is a major membrane based process in the dairy industry. However, commercialization of this application has been limited by membrane fouling, which has a detrimental influence on the permeation rate. There are a number of different chemical and physical cleaning methods currently used for cleaning a fouled membrane. It has been suggested that the cleaning frequency and the severity of such cleaning procedures control the membrane lifetime. The development of an optimal cleaning strategy should therefore have a direct implication on the process economics. Recently, the use of ultrasound has attracted considerable interest as an alternative approach to the conventional methods. In the present study, we have studied the ultrasonic cleaning of polysulfone ultrafiltration membranes fouled with dairy whey solutions. The effects of a number of cleaning process parameters have been examined in the presence of ultrasound and results compared with the conventional operation. Experiments were conducted using a small single sheet membrane unit that was immersed totally within an ultrasonic bath. Results show that ultrasonic cleaning improves the cleaning efficiency under all experimental conditions. The ultrasonic effect is more significant in the absence of surfactant, but is less influenced by temperature and transmembrane pressure. Our results suggest that the ultrasonic energy acts primarily by increasing the turbulence within the cleaning solution.     

Graver basis and proximity techniques for block-structured separable convex integer minimization problems

We consider $N$ -fold $4$ -block decomposable integer programs, which simultaneously generalize $N$ -fold integer programs and two-stage stochastic integer programs with $N$ scenarios. In previous work (Hemmecke et al. in Integer programming and combinatorial optimization. Springer, Berlin, 2010), it was proved that for fixed blocks but variable  $N$ , these integer programs are polynomial-time solvable for any linear objective. We extend this result to the minimization of separable convex objective functions. Our algorithm combines Graver basis techniques with a proximity result (Hochbaum and Shanthikumar in J. ACM 37:843–862,1990), which allows us to use convex continuous optimization as a subroutine.     

An Asymmetric Synthesis of L-694,458, a Human Leukocyte Elastase Inhibitor, via Novel Enzyme Resolution of beta-Lactam Esters

A convergent synthesis of [S-(R,S)]-2-[4-[(4-methylpiperazin-1-yl)carbonyl]phenoxy]-3,3-diethyl-N-[1-[3,4-(methylenedioxy)phenyl]butyl]-4-oxo-1-azetidinecarboxamide (L-694,458, 1), a potent human leukocyte elastase inhibitor, was achieved via chiral synthesis of key intermediates: (S)-3,3-diethyl-4-[4'-[(N-methylpiperazin-1-yl)carbonylphenoxy]-2-azetidinone (2) and (R)-alpha-propylpiperonyl isocyanate (3). Synthesis of beta-lactam 2 was achieved by a novel enantioselective lipase hydrolysis of ester 5 to produce (S)-3,3-diethyl-4-(4'-carboxyphenoxy)-2-azetidinone (6) (60% yield, three cycles, 93% ee) with isolation, epimerization, and recycling of the undesired (R)-ester 5. Isocyanate 3 was prepared by chiral addition of Zn(n-Pr)(2) to piperonal (98% yield, 99.2% ee), azide displacement and reduction to (R)-alpha-propylpiperonylamine (11) (58% yield, 85% ee), crystallization as the D-pyroglutamic acid salt (92% yield, 98.2% ee), and isocyanate formation (98% yield) with phosgene.     

Photocyclization of 2-(naphth-1-yl)-3-(thien-2-yl)propenoic acid and the total assignment of the 1H- and 13C-NMR spectra of the product

Photocyclization of the substituted 2-(naphth-1-yl)-3-(thien-2-yl)propenoic acid ( 3 ) in the presence of iodine and air in a benzene-cyclohexane mixture afforded a separable mixture of three compounds, phenanthro[2,1-b]thiophene-10-carboxylic acid ( 4 ), phenanthro[2,1-b]thiothene ( 5 ), and naphtho[1,8-cde]-thieno[3,2-g][2]benzopyran ( 6 )     

The 1:1 adduct of 4‐aminobenzoic acid with 4‐aminobenzonitrile

The 1:1 adduct of 4‐amino­benzoic acid (PABA) with 4‐am‐inobenzonitrile (PABN), C₇H₇NO₂·C₇H₆N₂, consists of a primary centrosymmetric cyclic hydrogen‐bonded PABA dimer interaction [O?O 2.640 (3) Å] peripherally linked into chains by weaker hydrogen bonds via a head‐to‐tail PABN interaction [N?N 3.179 (4) and N?O 3.062 (4) Å], and is linked between the chains by amine‐N (PABN) to amine‐N (PABA) interactions [N?N 3.233 (5) Å]. No proton transfer occurs.     

NMR method for the determination of solute hydrogen bond acidity

It is shown that the difference in the 1H NMR chemical shift of a protic hydrogen in DMSO and CDCl3 solvents is directly related to the overall, or summation, hydrogen bond acidity for a wide range of solutes. This provides a new and direct method of measuring the hydrogen bond acidity. For 54 compounds, the observed shifts for 72 protic hydrogens could be correlated to the Abraham solute hydrogen bond acidity parameter, A, with a correlation coefficient squared, R2, of 0.938 and a standard deviation, SD, of 0.054 units in A. A training equation that used half the data could predict A values for the remaining data with an average error of 0.001 and a standard deviation, SD, of 0.053 units, thus demonstrating the predictive power of the method. Unlike any previous method for the determination of solute hydrogen bond acidities, the NMR method allows the determination of A values for individual protic hydrogens in multifunctional solutes.     

Excited-state absorption properties of platinum(II) terpyridyl acetylides

A comprehensive photophysical study is presented which compares the ground- and excited-state properties of four platinum(II) terpyridyl acetylide compounds of the general formula [Pt(tBu3tpy)(CCR)]+, where tBu3tpy is 4,4',4' '-tri-tert-butyl-2,2':6',2' '-terpyridine and R is an alkyl or aryl group. [Ru(tBu3tpy)3]2+ and the pivotal synthetic precursor [Pt(tBu3tpy)Cl]+ were also investigated in the current work. The latter two complexes possess short excited-state lifetimes and were investigated using ultrafast spectrometry while the other four compounds were evaluated using conventional nanosecond transient-absorption spectroscopy. The original intention of this study was to comprehend the nature of the impressive excited-state absorptions that emanate from this class of transition-metal chromophores. Transient-absorbance-difference spectra across the series contain the same salient features, which are modulated only slightly in wavelength and markedly in intensity as a function of the appended acetylide ligand. More intense absorption transients are observed in the arylacetylide structures relative to those bearing an alkylacetylide, consistent with transitions coupled to the pi system of the ancillary ligand. Reductive spectroelectrochemical measurements successfully generated the electronic spectrum of the tBu3tpy radical anion in all six complexes at room temperature. These measurements confirm that electronic absorptions associated with the tBu3tpy radical anion simply do not account for the intense optical transitions observed in the excited state of the Pt(II) chromophores. Transient-trapping experiments using the spectroscopically silent reductive quencher DABCO clearly demonstrate the loss of most transient-absorption features in the acetylide complexes throughout the UV, visible, and near-IR regions following bimolecular excited-state electron transfer, suggesting that these features are strongly tied to the photogenerated hole which is delocalized across the Pt center and the ancillary acetylide ligand.     

Conjugation of testosterone modifies the interaction of mono-functional cationic platinum(II) complexes with DNA, causing significant alterations to the DNA helix

Previously a range of androgen conjugates with non-conventional platinum(II) complexes have been synthesised with the aim of enhancing cellular delivery, and which have shown increased cytotoxic activity compared with non-steroidal compounds (M. J. Hannon et al., Dalton Trans., 2010, DOI: 10.1039/c0dt00838a). To further study this, the complexes have been assessed for their ability to bind to and alter the structure of DNA. All platinum(II) complexes studied herein bind to model nucleo-bases and DNA, but to our surprise, testosterone-based complexes caused the DNA helix to undergo significant unwinding and bending, whereas non-steroidal control complexes caused minimal structural alterations. These effects are similar to those cisplatin induces on DNA structure despite the fact that these compounds produce a monofunctional lesion. This ability attributed to interactions between the DNA helix and bulky steroidal skeleton of testosterone, coupled with the enhanced cellular delivery induced by the steroid make the steroid approach an exciting way to explore non-conventional platinum drug delivery.