MOLECULAR CHANGES DURING THE PHOTOOXIDATION OF α-CRYSTALLIN IN THE PRESENCE OF UROPORPHYRIN

Singlet oxygen reacts preferentially with three amino acids in proteins, His, Trp and Met. In order to study the specific molecular events that result from such oxidations, calf a-crystallin was photooxidized in the presence of uroporphyrin and the reactions were investigated by high performance liquid chromatography peptide mapping using a photodiode array detector followed by fast atom bombardment mass spectrometry (FAB-MS). From these studies, the following conclusions can be inferred: (1) Upon photooxidation residue Met-68 of the B chain is oxidized to Met sulfoxide, whereas residue Trp-60 remains intact. (2) Two of the 16 His residues in a-crystallin are photooxidized with an apparent pK_a of ca 7.0. (3) FAB-MS analysis suggests that residue Lys-166 close to the C-terminal end of the A chain forms a cross-link with the His-7 residue close to the N-terminal end of the A chain. This may be either an inter- or intramolecular cross-link.     

Domains of Attraction for semi-martingales taking values in the tempered distributions space

We provide sufficient conditions to assure that a sequence of laws of semi-Martingales taking values in the tempered distribution has its accumulation points (in the weak topology) in a set of probability measures defined as semi-Martingale problem. Some other related questions are discussed.     

Doping Effects in CMOS-compatible CoSi Thin Films for Thermoelectric and Sensor Applications

Abstract . We report on semi-metallic cobalt monosilicide (CoSi) as a CMOS-compatible thermoelectric (TE) material and discuss the effect of n- and p-type dopants on its transport properties. Thin films of CoSi are developed using chemical vapor deposition tools and subsequent rapid thermal processing. Film properties such as microstructure, crystallinity and elemental distribution are studied via electron microscopy, X-ray diffraction and time-of-flight secondary ion mass spectroscopy. Doping silicon with boron prior to silicidation impedes the Co-Si diffusion process, while phosphorus atoms distribute uniformly in silicides with no voids or agglomerations. CoSi makes a suitable n-type TE candidate and provides an alternative to Si or SiGe materials. Transport properties of undoped CoSi exhibit a linear dependence within the investigated temperature window, whereas dopants in CoSi increase the number of electron carriers that contribute to charge transport and thereby influence the Seebeck coefficient. Thus, TE characteristics of thin CoSi films can be tuned via (i) the type of dopants used and/or (ii) varying the residual silicon thickness post silicidation.     

Root-growth mechanism for single-walled boron nitride nanotubes in laser vaporization technique

We present a detailed study of the growth mechanism of single-walled boron nitride nanotubes synthesized by laser vaporization, which is the unique route known to the synthesis of this kind of tube in high quantities. We have performed a nanometric chemical and structural characterization by transmission electron microscopy (high-resolution mode (HRTEM) and electron energy loss spectroscopy) of the synthesis products. Different boron-based compounds and other impurities were identified in the raw synthesis products. The results obtained by the TEM analysis and from the synthesis parameters (temperature, boron, and nitrogen sources) combined with phase diagram analysis to provide identification of the fundamental factors determining the nanotube growth mechanism. Our experiments strongly support a root-growth model that involves the presence of a droplet of boron. This phenomenological model considers the solubility, solidification, and segregation phenomena of the elements present in this boron droplet. In this model, we distinguish three different steps as a function of the temperature: (1) formation of the liquid boron droplet from the decomposition of different boron compounds existing in the hexagonal boron nitride target, (2) reaction of these boron droplets with nitrogen gas present in the vaporization chamber and recombination of these elements to form boron nitride, and (3) incorporation of the nitrogen atoms at the root of the boron particle at active reacting sites that achieves the growth of the tube.     

Encoding Binary Arithmetic Operations in Integer Programming Formulations

This paper presents the encoding of binary arithmetic operations within Integer Programming (IP) formulations, specifically the encoding of binary multiplication and addition/subtraction. This allows the direct manipulation of integer quantities represented as binary strings of arbitrary size. Many articles published in the past within the Chemical Engineering community have used this representation of integer quantities within Mixed-Integer formulations for Process Optimization and Design. Applications such as these can benefit from the formulations derived in this work. As a demonstrative application we consider the simple number factorization problem, according to which given an odd number C factors A and B are to be found such that C equals their product. If any such factors are found the number is factorable, else it is proven to be prime. An IP formulation is derived involving upper and lower bounding logical constraints to encode for the value of the binary string digits. The formulation involves \({\cal O}(\log C)\) binary variables, \({\cal O}((\log C)^{2})\) continuous variables, and \({\cal O}((\log C)^{2})\) constraints to describe the problem. Computational results demonstrate the validity of this approach, highlighting also the fact that such formulations are not very tight thus resulting in large numbers of iterations of the Branch and Bound algorithm used. It is also observed that the formulations become significantly tighter if logical upper bounding constraints forcing continuous variables involved to be zero are included.     

Raman Characterization of Pigments in Painted Beams and a Wall Painting Discovered in the San Francisco Church in Santiago,Chile

A material characterization of two artworks discovered in the San Francisco Church, Santiago, Chile, was performed using micro-Raman spectroscopy. Structural painted beams and a wall painting that belong to the same time period, between the end of the 17th and 19th centuries, were analyzed. The cross-section samples of both artworks were characterized and animal protein was identified in the ground layer in both cases. The supporting material of the beams was identified as cypress wood, and a rag paper layer was used as a base for the paint layer, which is composed mainly of a white ground layer on which the color was subsequently added; the yellow pigments are orpiment and chrome yellow; the green color probably arises from a mixture of orpiment, red lead, ultramarine blue, and calcite. A complete analysis of the materials using complementary techniques such as microchemistry and optical microscopy indicates that the mural was painted using a mixed technique and that organic and inorganic pigments were used. The identification of the synthetic pigment ultramarine blue in some blue areas of the wall revealed a modification of the wall painting in the 19th century; dark blue areas resulted from a mixture of indigo, palygorskite, and lazurite.     

Is it possible to explore Peccei-Quinn axions from frequency-dependence radiation dimming?

We explore how the Peccei-Quinn (PQ) axion parameter space can be constrained by the frequency-dependence dimming of radiation from astrophysical objects. To do so we perform accurate calculations of photon-axion conversion in the presence of a variable magnetic field. We propose several tests where the PQ axion parameter space can be explored with current and future astronomical surveys: the observed spectra of isolated neutron stars, occultations of background objects by white dwarfs and neutron stars, the light-curves of eclipsing binaries containing a white dwarf. We find that the lack of dimming of the light-curve of a detached eclipsing white dwarf binary recently observed, leads to relevant constraints on the photon-axion conversion. Current surveys designed for Earth-like planet searches are well matched to strengthen and improve the constraints on the PQ axion using astrophysical objects radiation dimming.     

An electrochemical magneto immunosensor (EMIS) for the determination of paraquat residues in potato samples

An electrochemical magneto immunosensor for the detection of low concentrations of paraquat (PQ) in food samples has been developed and its performance evaluated in a complex sample such as potato extracts. The immunosensor presented uses immunoreagents specifically developed for the recognition of paraquat, a magnetic graphite–epoxy composite (m-GEC) electrode and biofunctionalized magnetic micro-particles (PQ1-BSAMP) that allow reduction of the potential interferences caused by the matrix components. The amperometric signal is provided by an enzymatic probe prepared by covalently linking an enzyme to the specific antibodies (Ab198-cc-HRP). The use of hydroquinone, as mediator, allows recording of the signal at a low potential, which also contributes to reducing the background noise potentially caused by the sample matrix. The immunocomplexes formed on top of the modified MP are easily captured by the m-GEC, which acts simultaneously as transducer. PQ can be detected at concentrations as low as 0.18?±?0.09 μg L^?1. Combined with an efficient extraction procedure, PQ residues can be directly detected and accurately quantified in potato extracts without additional clean-up or purification steps, with a limit of detection (90 % of the maximum signal) of 2.18?±?2.08 μg kg^?1, far below the maximum residue level (20 μg kg^?1) established by the EC. The immunosensor presented here is suitable for on-site analysis. Combined with the use of magnetic racks, multiple samples can be run simultaneously in a reasonable time.     

Comparison of 24-h volume and creatinine-corrected total urinary polyphenol as a biomarker of total dietary polyphenols in the Invecchiare InCHIANTI study

Polyphenols have beneficial effects on several chronic diseases but assessing polyphenols intake from self-reported dietary questionnaires tends to be inaccurate and not very reliable. A promising alternative is to use urinary excretion of polyphenols as a proxy measure of intake. The best method to assess urinary excretion is to collect 24-h urine. However, since collecting 24-h urine method is expensive, time consuming and may be difficult to implement in large population-based studies, measures obtained from spot urine normalized by creatinine are commonly used. The purpose of the study was to evaluate the correlation between polyphenols dietary intake and total urinary polyphenol excretion (TPE), expressed by both 24-h volume and urinary creatinine normalization in 928 participants from the InCHIANTI study. Dietary intake data were collected using a validated food frequency questionnaire. Urinary TPE was analyzed by Folin-Ciocalteau assay. Both urinary TPE expression models were statistically correlated (r=0.580), and the partial correlation coefficient improved (pr=0.722) after adjusting for the variables that modify the urinary creatinine excretion (i.e. gender, age, BMI, physical activity and renal function). In crude models, polyphenol intake was associated with TPE corrected by 24-h volume (r=0.211; P<0.001), but not with creatinine normalization (r=0.014; P=0.692). However, urinary TPE expressed by creatinine correction was significantly correlated with dietary polyphenols after adjusting for covariates (pr=0.113; P=0.002). We conclude that urinary TPE expressed by 24-h volume is a better biomarker of polyphenol dietary intake than by urinary creatinine normalization. After covariate adjustment, both can be used for studying the relationships between polyphenol intake and health in large-scale epidemiological studies.