Monitoring reaction intermediates in the FeCl3-catalyzed michael reaction by nuclear inelastic scattering

We present a study of the metal-centered vibrations in the first step of the Fe(III)-catalyzed Michael reaction. Nuclear inelastic scattering of synchrotron radiation was carried out on a shock-frozen solution of FeCl3.6H2O in 2-oxocyclopentane ethylcarboxylate (CPEH), as well as on the solid reference compounds FeCl3.6H2O, [N(CH3)4][FeCl 4], and Fe(acac) 3. In addition to the vibrations of the FeCl4(-) anion at 133 and 383 cm(-1), a multitude of modes associated with the complex Fe(CPE)2(H2O)2 could be identified. Normal-mode analysis on different isomers of the simplified model complex Fe(acac)2(H2O)2 as well as that of the full complex carrying two entire CPE ligands was carried out using density functional calculations. Comparison with experiment suggests that the facial bis(diketonato) isomer probably dominates in the reaction mixture. Thus, we have identified for the first time the isomeric structure of an iron-based intermediate of a homogeneous catalytic reaction using nuclear inelastic scattering.     

Role of solvent in protein phase behavior: Influence of temperature dependent potential

Among many factors that affect protein phase separation, solvent plays a pivotal role in the possible structuring of the solvent molecules around the protein. The effect of solvent structuring is influenced strongly by temperature because of the relative stability of hydrogen bonding at low temperatures. As a result, quantitative as well as qualitative changes in protein phase separation may be expected with change in temperature. Here, we use a temperature dependent pair potential to examine the effect of water in the phase separation of protein solutions. Using Gibbs ensemble Monte Carlo simulations, we observe both a lower critical solution temperature and an upper critical solution temperature, in good agreement with the experimental observations for a number of proteins and phenomenological, statistical thermodynamic arguments. It is found that the effect of solvent is significant at low temperatures as a result of the highly structured shell of water molecules around the protein molecules. Radial distribution functions also indicate that a thick shell of structured water exists around the protein molecules due to the formation of strong hydrogen bonds when temperature is low. The findings of this study suggest that a simple model with a reasonable physical basis can capture the general phase behavior of some proteins or biopolymers.     

Modified active site coordination in a clinical mutant of sulfite oxidase

The molybdenum site of the Arginine 160 --> Glutamine clinical mutant of the physiologically vital enzyme sulfite oxidase has been investigated by a combination of X-ray absorption spectroscopy and density functional theory calculations. We conclude that the mutant enzyme has a six-coordinate pseudo-octahedral active site with coordination of Glutamine Oepsilon to molybdenum. This contrasts with the wild-type enzyme which is five-coordinate with approximately square-based pyramidal geometry. This difference in the structure of the molybdenum site explains many of the properties of the mutant enzyme which have previously been reported.     

Acetylation of beta-cyclodextrin surface-functionalized cellulose dialysis membranes with enhanced chiral separation

The enhanced enantiomeric separation of racemic phenylalanine solution has been demonstrated by the membrane-based chiral resolution method using an acetylated beta-cyclodextrin-immobilized cellulose dialysis membrane. Beta-cyclodextrin (CD) was first immobilized onto the surface of commercial cellulose dialysis membranes, followed by the acetylation reaction through the treatment of the membranes with acetic anhydride to form the chiral selective acetylated beta-cyclodextrin-immobilized cellulose dialysis membrane. The acetylated CD-immobilized membrane exhibits enantioselectivity in the range of 1.26-1.33 depending on the acetylation time. The improvement in enantioselectivity after acetylation was mainly attributed to the better discrimination ability of acetylated CD and the decrease in membrane pore size. Molecular modeling simulations indicate that the acetylation of hydroxyl groups would result in a CD conformation with torus distortions and would create higher steric hindrance for penetrants. As a result, compared to the original CD, the acetylated CD may have less effective binding but better discrimination of enantiomers. The energy drop is only 3 kcal/mol between different enantiomers before and after the binding of phenylalanine with an unmodified CD. The energy drop increases to 10 kcal/mol if acetylated CD is employed as the chiral selector, showing stronger characteristics for chiral selection.     

Theoretical investigation on structural, magnetic and electronic properties of ferromagnetic GdN under pressure

The tight-binding linear muffin tin orbital (TB-LMTO) method within the local density approximation is used to calculate structural, electronic and magnetic properties of GdN under pressure. Both nonmagnetic (NM) and magnetic calculations are performed. The structural and magnetic stabilities are determined from the total energy calculations. The magnetic to ferromagnetic (FM) transition is not calculated. Magnetically, GdN is stable in the FM state, while its ambient structure is found to be stable in the NaCl-type (B₁) structure. We predict NaCl-type to CsCl-type structure phase transition in GdN at a pressure of 30.4 GPa. In a complete spin of FM GdN the electronic band picture of one spin shows metallic, while the other spin shows its semiconducting behavior, resulting in half-metallic behavior at both ambient and high pressures. We have, therefore, calculated electronic band structures, equilibrium lattice constants, cohesive energies, bulk moduli and magnetic moments for GdN in the B₁ and B₂ phases. The magnetic moment, equilibrium lattice parameter and bulk modulus is calculated to be 6.99 μ_B, 4.935 Å and 192.13 GPa, respectively, which are in good agreement with the experimental results.     

Theoretical investigation on first-principles electronic and thermal properties of some CdRE intermetallics

Ab initio calculation on B2-cadmium rare earth (RE), CdRE (RE=La, Ce and Pr) intermetallics has been performed at T=0 K with respect to their structural, electronic and thermal properties. The structural and electronic properties are derived using self-consistent tight binding linear muffin tin orbital method at ambient and at high pressure. Other properties like lattice parameter, bulk modulus, density of states, electronic specific heat coefficient, cohesive energy, heat of formation, Debye temperature and Grüneisen constant for CdRE are also estimated. The RE-f effect can be seen in CdPr in terms of variation in the density of states and opens a possibility of structural instability. A pressure induced variation of Debye temperature is also presented for three cadmium rare earth intermetallics.     

A comparative study of electronic structure and bonding in transition metal monocarbides

The structural, electronic, elastic and bonding properties of four transition metal carbides, ScC, YC (group III), VC and NbC (group V), have been investigated systematically using the first principles density functional theory (DFT). The full potential linearized augmented plane wave (FP-LAPW) method with the generalized gradient approximation (GGA) for the exchange correlation has been used for the calculation of the total energy. The ground state properties, such as equilibrium lattice constant, bulk modulus, are computed and compared with theoretical and experimental data. The electronic and bonding patterns of the two groups of compounds have been analyzed quantitatively and compared with the available data. It is clear from band structures that all the four transition metal monocarbides are metallic in nature. Analysis of elastic constants reveals that the carbides of group III are ductile in nature while those of group V are brittle.     

Experimental investigations on plasticized PMMA/PVA polymer blend electrolytes

Blend based polymer electrolytes composed of poly (methyl methacrylate) (PMMA), poly(vinylalcohol) (PVA) and LiClO₄ are prepared using solvent casting technique. The polymer films are characterized by XRD and FTIR studies to determine the molecular environment for the conducting ions. These polymer films have been investigated in terms of ionic conductivity using the results of impedance studies. The influence of the blend composition on the electrochemical behaviour is also discussed. The highest room temperature conductivity obtained for the film consisting of PMMA, PVA, LiClO₄ and DMP is 0.06×10⁻³ S/cm at 303 K. The PMMA-PVA blend based polymer electrolytes look very desirable and promising for lithium battery applications.     

Integrating Interval Estimates of Global Optima and Local Search Methods for Combinatorial Optimization Problems

The problem of estimating the global optimal values of intractable combinatorial optimization problems is of interest to researchers developing and evaluating heuristics for these problems. In this paper we present a method for combining statistical optimum prediction techniques with local search methods such as simulated annealing and tabu search and illustrate the approach on a single machine scheduling problem. Computational experiments show that the approach yields useful estimates of optimal values with very reasonable computational effort.     

Purification and Characterization of Gum-Derived Polysaccharides of Moringa oleifera and Azadirachta indica and Their Applications as Plant Stimulants and Bio-Pesticidal Agents

Plant gums are bio-organic substances that are derived from the barks of trees. They are biodegradable and non-adverse complex polysaccharides that have been gaining usage in recent years due to a number of advantages they contribute to various applications. In this study, gum was collected from Moringa oleifera and Azadirachta indica trees, then dried and powdered. Characterizations of gum polysaccharides were performed using TLC, GC-MS, NMR, etc., and sugar molecules such as glucose and xylose were found to be present. Effects of the gums on Abelmoschus esculentus growth were observed through root growth, shoot growth, and biomass content. The exposure of the seeds to the plant gums led to bio stimulation in the growth of the plants. Poor quality soil was exposed to the gum polysaccharide, where the polysaccharide was found to improve soil quality, which was observed through soil analysis and SEM analysis of soil porosity and structure. Furthermore, the plant gums were also found to have bio-pesticidal activity against mealybugs, which showed certain interstitial damage evident through histopathological analysis.