Fractional Brownian dynamics in proteins

Correlation functions describing relaxation processes in proteins and other complex molecular systems are known to exhibit a nonexponential decay. The simulation study presented here shows that fractional Brownian dynamics is a good model for the internal dynamics of a lysozyme molecule in solution. We show that both the dynamic structure factor and the associated memory function fit well the corresponding analytical functions calculated from the model. The numerical analysis is based on autoregressive modeling of time series.     

Na*(3p)-Formation under grazing scattering of Na+-ions at an Al(111) surface

Excited Na*(3p)-atoms are observed in grazing surface-collision experiments with Na⁺-beams. Such atoms can be formed beyond a certain threshold velocity via resonant electron transfer between atomic and metallic conduction band levels due to motion of the atom relative to the surface of the metal (“kinematic resonance”). This mechanism is studied here theoretically employing two different techniques: the nonperturbative “Coupled Angular Mode” (CAM) method and the approximate “Transfer Hamiltonian” (TH) method. The calculated Na*(3p)-populations agree well with recent experimental results. Moreover, the complete density matrix of the Na*(3p)-subspace has been computed with the TH-method for ion-energies between 10 and 300 keV.     

Bayesian analysis and inference from QSAR predictive model results

QSAR models have been under development for decades but acceptance and utilization of model results have been slow, in part, because there is no widely accepted metric for assessing their reliability. We reapply a method commonly used in quantitative epidemiology and medical decision-making for evaluating the results of screening tests to assess reliability of a QSAR model. It quantifies the accuracy (expressed as sensitivity and specificity) of QSAR models as conditional probabilities of correct and incorrect classification of chemical characteristic, given a true characteristic. Using Bayes formula, these conditional probabilities are combined with prior information to generate a posterior distribution to determine the probability a specific chemical has a particular characteristic, given a model prediction. As an example, we apply this approach to evaluate the predictive reliability of a CATABOL model and base on it a "ready" and "not ready" biodegradability classification. Finally, we show how predictive capability of the model can be improved by sequential use of two models, the first one with high sensitivity and the second with high specificity.     

Evaluation of an Economical Sunlamp that Emits a Near Solar UV Power Spectrum for Conducting Photoimmunological and Sunscreen Immune Protection Studies

Expense and inconvenience have restricted the use of the filtered xenon are lamp (solar simulator) as a UV source for conducting large-scale animal studies. Because sunscreen immunoprotective levels are significantly affected by the UV power spectrum of the source it is imperative that a solar simulating source be used for accurate measurements of sunscreen protection levels that are relevant to human UV exposures from sunlight. However, relatively inexpensive sunlamps, e. g. the UVA-340, that emit a UV power spectrum similar to that of a solar simulator are available. Unlike FS-type UVB sunlamps, which have a significant amount of effective immunosuppressive nonsolar UV energy at wavelengths below 295 nm, the immunosuppression effectiveness spectrum of UVA-340 sunlamps was nearly identical to that of a solar simulator. The purpose of this study was to evaluate this sunlamp for conducting photoimmunological and sunscreen immune protection studies. Groups of C3H mice were exposed to a range of UVA-340 sunlamp doses (0.25 KJ/m² to 20.0 KJ/m²) to establish a dose-response curve and determine the minimum immune suppression dose (MISD) for induction of local-type suppression of contact hypersensitivity (CH). The MISD, defined as the lowest UV dose given to produce ～50% suppression of the CH response in mice, was determined to be 1.0 kJ/m² for UVA-340 sunlamps. Immune protection tests on four marketed sunscreen lotions (sun protection factors [SPF] 4, 8, 15 and 30) were then conducted with UVA-340 sunlamps using MISD as the endpoint. The immune protection factors for these sunscreens were equivalent to the level of protection predicated by their labeled SPF. These results are similar to those we have previously obtained using a solar simulator. We conclude from these data that the immunosuppressive effects of UVA-340 sunlamps are similar to those of a solar simulator; however, further studies are needed to determine if UVA-340, or similar, sunlamps are a viable alternative to the solar simulator for conducting large-scale animal experiments that require a relevant UV solar spectrum.     

Mobility of some ions produced by tritium betas

The aqueous solution of coumarin has been studied spectrophotometrically as a -ray dosimeter and effects of temperature and light conditions on the stability of response during post-irradiation storage have been studied. Post-irradiation storage at room temperature in dark showed that after a very small increase in absorbance within the first 6 d, the response of the dosimeter was stable up to 42 d. At lower temperature (–15 °C), there was some decrease in absorbance within the first 24 h followed by a stable response up to 35 d. For post-irradiation storage at higher temperatures (40, 60 °C) the dosimeter, apart from some initial increase in absorbance, showed a nearly stable response up to 25 d. The effect of different light conditions during post-irradiation storage has also been studied. When stored in fluorescent light the response was almost stable from 6 d till about 40 d. In diffuse sunlight, the response was stable up to about 35 d at 360 nm and 370 nm but showed a somewhat unstable behavior at 347 nm. The dosimetric solutions were unstable when exposed to direct sunlight.     

Benzolactams. 4. Reaction of 3',4'- or 4',5'-dialkoxy-substituted 1-(2'-Bromobenzyl)-2-ethoxycarbonyl-1,2,3,4-tetrahydroisoquinolines with alkyllithium. 1,2 and 1,4 additions of alkyllithium to benzolactams

Treatment of 1-(2'-bromo-3',4'-dialkoxybenzyl)-1,2,3, 4-tetrahydroisoquinoline carbamates, 1a,c, with excess alkyllithium gave 8-oxoberbines, 2a,c, which were successively attacked in situ with another molecule of alkyllithium to give 1,2 and/or 1,4 addition products. A primary alkyllithium, such as MeLi or BuLi, gave a 1,2 addition product, 8-methyleneberbine 9a or 8-butylideneberbine 3a. t-BuLi preferred 1,4 addition, followed by elimination of the alkoxy group, to give 9-tert-butyl-8-oxoberbine 6a or 7c. s-BuLi gave a mixture of 1,2 and 1,4 addition products, 1-[2'-(2' '-methylbutyryl)benzyl]-1,2,3,4-tetrahydroisoquinoline 4a and 9-s-butyl-8-oxoberbine 5a. Similar treatments of carbamate 1b having no alkoxy group at its 3' position gave 1,2 addition products, 8-butylideneberbine 3b, 1-[2'-(2' '-methylbutyryl)benzyl]-1,2,3, 4-tetrahydroisoquinoline 4b, and 1-(2'-pivaloylbenzyl)-1,2,3, 4-tetrahydroisoquinoline 6b, in all cases. Reactions of 1a with s-BuMgCl and isoPrMgCl also gave the 1,4 adduct, 5a, and its 9-isoPr analogue, 12a. Treatment of 9a with excess NaBH(4) in AcOH gave (+/-)-coralydine (10b).     

Nitropyrazoles

The double Vilsmeier formylation of theC-methyl group in pyrazole derivatives has been shown to occur when a nitro-group is in the adjacent position of the ring. A method for the synthesis ofC-(diformylmethyl)nitropyrazoles based on this reaction has been developed.For the previous communication, see Ref. 1; for Part 2, see Ref.2 Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1273–1276, July, 1993.     

Coordination Complexes of Some Group(IV) Halides with Monodentate Schiff Bases

Coordination compounds resulting from the interaction of N-(phenyl)benzalaldimine and its derivatives containing a methyl group in different positions of the aniline ring and group(IV) halides, MX₄ (where M = Si or Sn and X = Cl or Br), have been prepared and characterized by elemental analyses and electronic, infrared and Raman spectra.     

The stability of silver iodide sols in the presence of polyacrylic acids of various molecular weights

Summary The effect of a series of polyacrylic acids, ranging in molecular weight from 1.67×10⁴ to 2.36×10⁶, on the stability of positively charged silver iodide particles has been examined. Flocculation of the sol occurred at a well defined concentration of polyacrylic acid,c _f , and a further increase in concentration of the polyelectrolyte caused restabilization of the sol. Over the range examinedc _f appeared to be related to the viscosity average molecular weight of the acid,M _v , by an equation of the form,c _f =a ·M _v ^{– b} wherea andb are constants.     

Exact spin-pairing energies at the crossovers in octahedral d 4, d 5, d 6, and d 7 transition metal complexes

Exact spin-pairing energies are calculated by direct diagonalization of the relevant ligand field plus interelectronic repulsion matrices for the configurations d ⁴, d ⁵, d ⁶, and d ⁷ of octahedral transition metal ions. The results are presented in terms of /B as function of = C/B for the range of values =3.0 to 8.0. Comparison with the quantity resulting from a simplified approach in which configuration interaction is neglected or considered on an approximate basis only reveals significant differences. Useful estimates of spin-pairing energies are provided, in addition, on the basis of empirical magnetic and electronic spectral data.

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Zusammenfassung Exakte Spinpaarungsenergien für die Konfigurationen d ⁴, d ⁵, d ⁶ und d ⁷ oktaedrischer Übergangsmetallionen werden durch direkte Diagonalisierung der entsprechenden Matrizen des Ligandenfeldes sowie der Elektronenwechselwirkung berechnet. Die Ergebnisse für /B werden in Abhängigkeit von = C/B für den Wertebereich =3.0 bis 8.0 angegeben. Ein Vergleich mit der Größe , die bei einer vereinfachten Behandlung unter Vernachlässigung oder näherungsweiser Berücksichtigung der Konfigurationswechselwirkung erhalten wird, zeigt auffallende Unterschiede. Nützliche Abschätzungen der Spinpaarungsenergie werden außerdem unter Benutzung empirischer magnetischer und elektronenspektroskopischer Daten erhalten.

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Résumé Les énergies exactes de couplage de spin sont calculées par diagonalisation directe du champ de ligand correspondant en plus des matrices de répulsion électronique pour les configurations d ⁴, d ⁵, d ⁶ et d ⁷ des ions octaédriques des métaux de transition. Les résultats sont présentés en termes de /B en fonction de = C/B dan l'intervalle =3,0 à 8,0. On trouve des différences significatives par comparaison de avec les valeurs résultant d'une approche simplifiée sans interaction de configuration ou avec interaction de configuration approchée. De plus, des estimations des énergies de couplage de spin sont obtenues à partir de données empiriques magnétiques et spectrales.