Systems-based design of bi-ligand inhibitors of oxidoreductases: filling the chemical proteomic toolbox

Genomics-driven growth in the number of enzymes of unknown function has created a need for better strategies to characterize them. Since enzyme inhibitors have traditionally served this purpose, we present here an efficient systems-based inhibitor design strategy, enabled by bioinformatic and NMR structural developments. First, we parse the oxidoreductase gene family into structural subfamilies termed pharmacofamilies, which share pharmacophore features in their cofactor binding sites. Then we identify a ligand for this site and use NMR-based binding site mapping (NMR SOLVE) to determine where to extend a combinatorial library, such that diversity elements are directed into the adjacent substrate site. The cofactor mimic is reused in the library in a manner that parallels the reuse of cofactor domains in the oxidoreductase gene family. A library designed in this manner yielded specific inhibitors for multiple oxidoreductases.     

Zeolite NaY-mediated oxidation of dyes with H2O2: unique heterogeneous non-transition metal center cleavage of H2O2 under visible light irradiation

This study investigated the visible-light catalysis mediated by zeolite NaY on the oxidation of dyes with H₂O₂. The results demonstrated that zeolite NaY acts as a sink for the electron from the photo-excited dye in the heterogeneous catalysis. Furthermore, the electron can effectively activate H₂O₂ to produce ^·OH radical that is a powerful oxidant for the oxidation of dye at room temperature. The effects of the framework topology, Si/Al ratio, and exchangeable cation of the zeolite on the oxidation of various dyes were also shown.     

四个酰基硫脲衍生物及其配合物的合成与表征

本文报道了四个Ｎ－酰基硫脲衍生物及其Ｃｕ＾２＋，Ｎｉ＾２＋，Ｃｄ＾２＋，Ｓｎ＾４＋配合物的合成。用质谱、红外光谱、紫外光谱对它们进行了结构、性质表征。配体与金属离子配位主要是通过硫原子进行，配合物都是非离子型的。     

Voltammetry and electrocatalytic properties of cobalt (1,4,8,12-tetraazacyclopentadecane) in aqueous solution

Summary The spectrochemical, electrochemical and electrocatalytic properties of Co[15]aneN₄ ([15]aneN₄ = 1,4,8,12-tetraazacyclopentadecane) have been investigated. The results show that, in aqueous solution, this compound mainly exists as three species whose axial coordination positions are occupied by water and/or hydroxy ligands; it is marginal whether other substrates such as Cl^– and NO _inf3 ^sup– interact with the central ion in acid-base solutions. The approximate Pourbaix diagram of Co^III/II[15]ane N₄ was determined. There is an electrochemically-induced isomerization between two trans conformational isomers of the Co[15]aneN₄ complexes in acid and netural solutions. The Co[15]aneN₄ complex has electrocatalytic properties for reduction of nitrate and nitrite only in strong alkaline solution.     

Time dependence of viscosity of dilute polyisobutylene solutions

Summary Shearing at constant gradient of polyisobutylene (PIB) solutions in viscous polybutene oils results in time dependent changes of their viscosities. Two PIB fractions (M=8·10⁶ and 3.8·10⁶) have been studied in a variety of solvents, covering the viscosity range from 5 to 0.5·10⁻² poise. The overall phenomenon is similar to that already observed for polymethylmethacrylate, polystyrene, and polyethylene oxide solutions in Aroclor. Results have been discussed in terms of polymer molecular weight and concentration, solvent viscosity and gradient. The systems investigated are free from strong polar interactions and tendency toward molecular aggregation; time dependent changes of viscosity are therefore observable also for true molecularly dispersed solutions.

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Zusammenfassung Scherung mit konstantem Geschwindigkeitsgradienten von Polyisobutylen (PIB)-L?sungen in viskosen Polybuten-?len ergibt zeitabh?ngige ?nderungen ihrer Viskosit?ten. Zwei PIB-Fraktionen (M=8·10⁶ und 3,8·10⁶) wurden in einer Vielzahl von L?sungsmitteln untersucht, die den Viskosit?tsbereich von 5 bis 0,5·10⁻² Poise überdeckten. Das ph?nomenologische Erscheinungsbild ist ?hnlich dem schon beobachteten für Polymethylmethacrylat, Polystyrol und Poly?thylenoxid-L?sungen in Aroclor. Die Ergebnisse wurden hinsichtlich des Polymer-Molekulargewichts und der Konzentration, der L?sungsmittelviskosit?t und des Gradienten diskutiert. Die untersuchten Systeme sind frei von starken polaren Wechselwirkungen und von Tendenzen in Richtung auf molekulare Aggregation. Zeitabh?ngige ?nderungen der Viskosit?t sind deshalb auch für wahre molekulardisperse L?sungen beobachtbar.

     

微量元素La对Al—Si合金凝固过程的影响

本文用差热分析法系统地研究了La掺杂对Al-Si共晶合金、亚共晶、超共晶的动态凝固过程的影响。结果表明,La促使α(Al)成核,使体系中初晶α(Al)的析出温度比AJ-Si二元合金中Al初晶的实际析出温度明显提高;La对初晶Si的成核和长大起抑制作用,使超共晶中初晶Si相析出温度较二元合金中的Si初晶的实际析出温度明显降低。     

Syntheses of 2-arylated 1-benzazocines via Beckmann rearrangement

One-step and highly efficient syntheses of 2-aryl-1-benzazocines via Beckmann rearrangement of 5H-benzocyclohepten-5-one oxime mesylates in dry toluene was described, in which aryl Grignard reagents were used for the first time to induce Beckmann rearrangement directly without any additional protic agents. Iodotrimethylsilane was also employed to promote Beckmann rearrangement of the mesylates, followed by the treatment of the intermediate imidoyl iodide with phenylmagnesium bromide to complete the synthesis of benzazocines.     

纳米碳管电极上氧的电催化还原

以聚四氟乙烯为粘结剂制成了多壁纳米碳管（MWNT）电极.采用恒电位阶跃法和循环伏安法研究了MWNT电极在碱性溶液中的电化学行为，并对碱性溶液中溶解氧在该电极上的电化学还原行为进行了研究.实验结果表明： MWNT电极具有比石墨电极更高的孔隙率和电化学表面积；MWNT电极上O2还原成的反应为准可逆过程；在5～50 mV•s－1的扫描速率范围内，阴极峰电流与扫描速度成线性关系，表明MWNT电极上O2还原成的反应受吸附控制；对碱性溶液中的氧还原反应， MWNT比石墨具有更高的催化活性.     

浊点萃取在生物大分子分离及分析中的应用

浊点萃取是一种新兴的环保型液2液萃取方法。本文介绍了表面活性剂胶束溶液的形成过程和浊点现象, 总结了浊点萃取法的操作方法, 并且详细讨论了它在生物大分子分离纯化及生物分析中的应用。最后探讨了该技术的发展前景。     

Electrochemical and in situ Raman spectroscopic study on the stability of poly(<Emphasis Type="Italic">N</Emphasis>-methylaniline)

The stability of poly(N-methylaniline) (PNMA) as electrode material has been studied in aqueous solutions of sulfuric acid with the use of electrochemical and in situ Raman spectroscopic techniques. It has been shown that the electrochemical decomposition of electrodeposited PNMA films follows a first-order reaction kinetics. The decomposition rate constants vary between 1.2 × 10⁻⁵ and 2.0 × 10⁻³ s⁻¹ for electrode potential varying between 0.2 and 1.0 V vs Ag/AgCl, respectively. In situ Raman spectroscopy has been applied in obtaining kinetic data at selected electrode potentials, and good correlation of these data with the corresponding data obtained by cyclic voltammetry has been found. As compared to polyaniline, the decomposition of PNMA proceeds at nearly the same rate at electrode potentials not exceeding 0.5 V. The decomposition of PNMA proceeds faster within the potential limits of 0.5 to 0.8 V and slower at electrode potentials exceeding 0.8 V as compared to polyaniline. This article is dedicated to Professor Algirdas Vaškelis (Institute of Chemistry, Vilnius, Lithuania) on the occasion of his 70th birthday and in honour of his contributions to electrochemistry and physical chemistry.