Impact of orientational distribution of adsorbing objects on dynamics of Random Sequential Ballistic Adsorption (RSBA) dynamics

Recently, by proposing a new variant of Random Sequential Adsorption (RSA) namely Random Sequential Ballistic Adsorption (RSBA) model [Pradip B. Shelke, A.G. Banpurkar, S.B. Ogale, A.V. Limaye, Surf. Sci. 601 (2007) 274], we addressed the issue of adsorption dynamics of extended objects where the objects, upon adsorption, protrude outside the substrate. This study brought out the role of the arriving trajectory in the adsorption dynamics. In the present work the possible role of the orientational distribution of the arriving objects in the RSBA dynamics is investigated. The dynamics of RSBA of needles (line segments) is studied analytically and by computer simulation for different types of θ distributions of arriving needles, θ being the angle made by the arriving needle with normal to the substrate. Three types of θ distributions, namely a uniform distribution over the range (0, π/2), a Gaussian distribution and a distribution uniform over the solid angle, are considered. Analytical treatment establishes that in all the three cases, the number n(t) of adsorbed objects at a late time t follows a power law n(t) ∼ t^α, and the exponent α depends on the specifics of the θ distribution. In general, for distribution f(θ) ∝ θ^β, for θ → 0, α is found to be 2/(β + 3). The simulation results are in excellent agreement with the analytical findings and together they reveal that the orientational distribution of arriving objects has significant consequences for the Random Sequential Ballistic Adsorption (RSBA) process.     

Clan structure in high energypn,pp andp\bar p interactions

We have analysed ourpn data at 400 GeV (corresponding to a centre-of-mass energy \(\sqrt s = 27.5\) GeV) together with otherpp and \(p\bar p\) data in the centre of mass energy range 11.5–900 GeV. The fits of all these distributions to a negative binomial distribution are performed. The variations in the fitted average multiplicity and in the inverse of the fitted parameterk are obtained with respect to the centre of mass energy. An assessment of the single diffractive component in the multiplicity distribution is made and its variation with the centre of mass energy discussed. The average number of clans and the average charged multiplicity per clan are determined and the centre of mass energy dependences shown.     

Simple Organic Salts Having a Naphthalenediimide (NDI) Core Display Multifunctional Properties: Gelation,Anticancer and Semiconducting Properties

Following a supramolecular synthon rationale, a dicarboxylic acid derivative having a naphthalenediimide (NDI) core, namely, bis‐N‐carboxymethyl naphthalenediimide ( NDI‐G ), was reacted with n‐alkyl amines with varying alkyl chain lengths to generate a new series of primary ammonium dicarboxylate (PAD) salts. The majority of the salts (≈85 %) were found to gel various polar solvents. The gels were characterized by dynamic rheology and high‐resolution electron microscopy. Single‐crystal and powder X‐ray diffraction analyses were used to study the supramolecular synthon present in one of the gelator salts (i.e., S8 ). Charge‐transfer (CT)‐induced gelation with donor molecules such as anthracene methanol ( Ant ) and pyrene ( Py ) was also possible with S8 . The CT complex ( S8.Ant ) displayed anticancer activity as probed by cell migration assay on the highly aggresive breast cancer cell line MDA‐MB‐231 . The DMSO gel of S8.Ant also displayed semiconducting behavior. To the best of our knowledge, simple organic salts with an NDI core that display such mulitifunctional properties are hitherto unknown.     

Photoinduced DNA Cleavage Reactions by Designed Analogues of Co(III)-Bleomycin: The Metalated Core Is the Primary Determinant of Sequence Specificity

A 2,4'-bithiazole group has been covalently attached to the Co(III) complex of a designed ligand PMAH that mimics the metal-binding locus of the antitumor drug bleomycin (BLM). The deprotonated PMA(-) ligand binds Co(III) via five nitrogens located in primary and secondary amines, a pyrimidine and an imidazole ring, and a peptide moiety. The 2,4'-bithiazole group is tethered to the [Co(PMA)](2+) unit via an imidazole that is connected to the bithiazole moiety with a (CH(2))(3) spacer. The structure of this hybrid analogue, namely, [Co(PMA)(Bit)]Cl(2) (7, Bit = 2'-methyl-2,4'-bithiazole-4-carboxamido-N'-(3-propyl)imidazole) has been established by spectroscopic techniques. 7 promotes photocleavage of DNA at micromolar concentrations. Unlike simpler analogues like [Co(PMA)(H(2)O)](2+) and [Co(PMA)Cl)](+) which induce random DNA cleavage upon UV illumination, 7 exhibits sequence specificity in the DNA photocleavage reaction. Intriguing is to note that 7 exhibits the same 5'GG-N3' sequence preference as another hybrid analogue [Co(PMA)(Int-A)]Cl(2) (6, Int-A = acridine-9-carboxamido-N'-(3-propyl)imidazole) that contains an acridine moiety as the DNA-binding group. The observed sequence specificity of 6 and 7 therefore does not reflect the sequence preferences of the DNA-binding groups (acridine and bithiazole). The results indicate that the metalated core of the hybrid analogues, i.e., the [Co(PMA)](2+) unit is the key factor in determining their sequence specificity.     

Time-resolved fluorescence of tryptophans in yeast hexokinase-PI: effect of subunit dimerization and ligand binding

Time-resolved and steady-state fluorescence measurements have been performed on monomeric and dimeric forms of yeast hexokinase-PI. Observation of similar emission spectra and fluorescence decay parameters for both the forms of the enzyme suggests that tryptophan residue(s) are not likely to be present at the subunit-subunit interface and the process of dimerization does not perturb the local environment of tryptophan(s). The fluorescence decay of tryptophans in enzyme could be fitted to a bi-exponential function with two lifetime components, tau1 approximately 2.2 ns and tau2 approximately 3.9 ns. Binding of glucose, which is known to convert the 'open' conformation of the enzyme to a 'closed' active conformation, results in approximately 30% reduction in emission intensity and a selective decrease in tau1 from approximately 2.2 to approximately 1.1 ns. These effects can be reversed by the addition of trehalose 6-phosphate (an inhibitor of yeast hexokinase), suggesting that the trehalose 6-phosphate inhibits the enzyme by binding to its 'open' inactive conformation rather than competing with glucose to bind to the 'closed' active conformation. Binding of nucleotide ligands (ATP, ADP and adenyl-(beta,gamma-methylene)-diphosphate (AMPPCP)) to the monomeric or dimeric form of enzyme quenched the steady-state fluorescence by approximately 4-8%, but had no measurable effect on the distribution of lifetimes or on their magnitudes. Addition of nucleotides to the enzyme-glucose complex also did not produce any further change in fluorescence decay parameters. These results indicate that it is highly unlikely that the formation of a ternary enzyme-glucose-nucleotide complex from the binary enzyme-glucose complex is accompanied by a large conformational change in the enzyme, as has been surmised in some earlier studies.     

Reaction of benzyl chloride with ammonium sulfide under liquid–liquid phase transfer catalysis: Reaction mechanism and kinetics

The reaction between benzyl chloride and aqueous ammonium sulfide was carried out in an organic solvent – toluene, using tetrabutylammonium bromide (TBAB) as phase transfer catalyst (PTC). Two products, namely dibenzyl sulfide (DBS) and benzyl mercaptan (BM), were identified in the reaction mixture. The selectivity of DBS was maximised by changing various parameters such as NH₃/H₂S mole ratio, stirring speed, catalyst loading, concentration of benzyl chloride, volume of aqueous phase, and temperature. The highest selectivity of DBS obtained was about 90% after 445 min of reaction with excess benzyl chloride at 60 °C. Complete conversion of benzyl chloride could be achieved at the cost of very low selectivity of DBS and very high selectivity of BM. The apparent activation energy for the kinetically controlled reaction was found to be 12.3 kcal/mol. From the detailed study of the effects of various parameters on the reaction, a suitable mechanism was established which could explain the course of the reaction.     

Reactions of nitric oxide with a low-spin Fe(III) center ligated to a tetradentate dicarboxamide N4 ligand: parallels between heme and non-heme systems

Reaction of excess NO with the non-heme Fe(III) complex [(bpb)Fe(py)2]ClO4 in MeCN under strictly anaerobic conditions affords the {Fe-NO}6(nitro)(nitrosyl) complex [(bpb)Fe(NO)(NO2)] (1) via metal-promoted NO disproportionation, while in a MeOH/MeCN mixture, the same reaction leads to reductive nitrosylation and generation of the {Fe-NO}7 species [(bpb)Fe(NO)] (2). Exposure of a solution of 1 in DMF to dioxygen leads to formation of the ring-nitrosylated product [(bpb-NO2)Fe(NO3)(DMF)] (3). The present system therefore exhibits all the NO reactivities reported so far with the iron-porphyrins.