Interpreting ultrafast molecular fragmentation dynamics with ab initio electronic structure calculations

High-level ab initio electronic structure calculations are used to interpret the fragmentation dynamics of CHBr(2)COCF(3), following excitation with an intense ultrafast laser pulse. The potential energy surfaces of the ground and excited cationic states along the dissociative C-CF(3) bond have been calculated using multireference second order perturbation theory methods. The calculations confirm the existence of a charge transfer resonance during the evolution of a dissociative wave packet on the ground state potential energy surface of the molecular cation and yield a detailed picture of the dissociation dynamics observed in earlier work. Comparisons of the ionic spectrum for two similar molecules support a general picture in which molecules are influenced by dynamic resonances in the cation during dissociation.     

Synthesis of a key precursor for orienticin C and model study on ruthenium-mediated macrocyclization

A tripeptido--arene--ruthenium complex was prepared as a key precursor for the projected synthesis of orienticin C, demonstrating that the cyclopentadienylruthenium moiety can be attached to a chloroarene in the presence of multiple functionality. The ruthenium-mediated intramolecular SNAr reaction for formation of the required diaryl ether linkage was successfully tested on a model system.     

Gelation Kinetics and Mechanical Properties of Thiol-Tetrazole Methylsulfone Hydrogels Designed for Cell Encapsulation

Hydrogel precursors that crosslink within minutes are essential for the development of cell encapsulation matrices and their implementation in automated systems. Such timescales allow sufficient mixing of cells and hydrogel precursors under low shear forces and the achievement of homogeneous networks and cell distributions in the 3D cell culture. The previous work showed that the thiol-tetrazole methylsulfone (TzMS) reaction crosslinks star-poly(ethylene glycol) (PEG) hydrogels within minutes at around physiological pH and can be accelerated or slowed down with small pH changes. The resulting hydrogels are cytocompatible and stable in cell culture conditions. Here, the gelation kinetics and mechanical properties of PEG-based hydrogels formed by thiol-TzMS crosslinking as a function of buffer, crosslinker structure and degree of TzMS functionality are reported. Crosslinkers of different architecture, length and chemical nature (PEG versus peptide) are tested, and degree of TzMS functionality is modified by inclusion of RGD cell-adhesive ligand, all at concentration ranges typically used in cell culture. These studies corroborate that thiol/PEG-4TzMS hydrogels show gelation times and stiffnesses that are suitable for 3D cell encapsulation and tunable through changes in hydrogel composition. The results of this study guide formulation of encapsulating hydrogels for manual and automated 3D cell culture.     

Thermal degradation in a trimodal poly(dimethylsiloxane) network studied by (1)H multiple quantum NMR

Thermal degradation of a filled, cross-linked siloxane material synthesized from poly(dimethylsiloxane) chains of three different average molecular weights and with two different cross-linking species has been studied by (1)H multiple quantum (MQ) NMR methods. Multiple domains of polymer chains were detected by MQ NMR exhibiting residual dipolar coupling () values of 200 and 600 Hz, corresponding to chains with high average molecular weight between cross-links and chains with low average molecular weight between cross-links or near the multifunctional cross-linking sites. Characterization of the values and changes in distributions present in the material were studied as a function of time at 250 degrees C and indicate significant time-dependent degradation. For the domains with low , a broadening in the distribution was observed with aging time. For the domain with high , increases in both the mean and the width in were observed with increasing aging time. Isothermal thermal gravimetric analysis reveals a 3% decrease in weight over 20 h of aging at 250 degrees C. Degraded samples also were analyzed by traditional solid-state (1)H NMR techniques, and off-gassing products were identified by solid-phase microextraction followed by gas chromatography-mass spectrometry. The results, which will be discussed here, suggest that thermal degradation proceeds by complex competition between oxidative chain scissioning and postcuring cross-linking that both contribute to embrittlement.     

Molecular fragmentation driven by ultrafast dynamic ionic resonances

The authors time resolve molecular motion in bound state, ionic potentials that leads to bond cleavage during the interaction with intense, ultrafast laser fields. Resonances in molecular ions play an important role in dissociative ionization with ultrafast laser fields, and the authors demonstrate how these resonances evolve in time to produce dissociation after initial strong-field ionization. Exploiting such dynamic resonances offers the possibility of controlled bond breaking and characterizing time-dependent molecular structure.     

Wave packet driven dissociation and concerted elimination in CH2I2

We follow the evolution of a vibrational wave packet in a highly excited state of the halogenated methane CH(2)I(2). We observe how the wave packet modulates both dissociation and concerted elimination to form CH(2)I(+) and I(2) (+), respectively. We present a simple and intuitive interpretation of the molecular dynamics leading to the formation of the products.     

Approach to the homoerythrina alkaloids using a tandem N-alkylation/azomethine ylide cycloaddition

Synthetic efforts toward the homoerythrina alkaloids 1-3 are described. Two separate model systems guided the pivotal [3 + 2] azomethine ylide cycloaddition cascade to form the A-C rings of these alkaloids. The cycloaddition precursors 63 and 68, prepared in nine and ten steps, respectively, from alkyne 47, each contain an enolizable ketone, a tethered electrophile, and an electron-poor dipolarophile. Heating 63 and 68 with the stannyl amine 17 generated demethoxyschelhammeridine 65 and demethoxyschelhammericine 70, the products of intramolecular azomethine ylide cycloadditions. Subsequent attempts to install the C-3 methoxy group of 1-3 are also described.     

The iso­thio­cyanate complex of tri­phenyl­borane forms an unusual coordination polymer with [K(18‐crown‐6)]+, both in the solid state and in solution

The title salt, (1,4,7,10,13,16‐hexa­oxa­cyclo­octa­decane‐κ⁶O)[(iso­thio­cyanato)­tri­phenyl­borato‐κS]­potassium(I), [K(C₁₉H₁₅BNS)(C₁₂H₂₄O₆)] or [K(SCNBPh₃)(18‐crown‐6)], where 18‐crown‐6 is 1,4,7,10,13,16‐hexaoxa­cyclo­octa­decane and [SCNBPh₃]⁻ is the (iso­thio­cyanato)­tri­phenyl­borate anion, exhibits a supramol­ecular structure that is best described as a helical coordination polymer or molecular screw. This unusual supramolecular structure is based on a framework in which the SCN⁻ ion bridges the chelated K⁺ ion and the B atom of BPh₃ in a μ₂ fashion. The X‐ray crystal structure of the title salt has been determined at 100 (1) and 293 (2) K. The K⁺ ion exhibits axial ligation by the S atom of the [SCNBPh₃]⁻ anion, with a K—S distance of 3.2617 (17) Å (100 K). The trans‐axial ligand is an unexpected η²‐bound C=C bond of a phenyl group (meta‐ and para‐C atoms) that belongs to the BPh₃ moiety of a neighboring mol­ecule. The K—C bond distances span the range 3.099 (3)–3.310 (3) Å (100 K) and are apparently retained in CDCl₃ solution (as evidenced by ¹³C NMR spectroscopy). By virtue of the latter interaction, the supramolecular structure is a helical coordination polymer, with the helix axis parallel to the b axis of the unit cell. IR spectroscopy and semi‐empirical molecular orbital (AM1) calculations have been used to investigate further the electronic structure of the [SCNBPh₃]⁻ ion.     

Di‐μ‐benzoato‐bis­[di­carbonyl­(pyri­dine)­ruthenium(I)] (new polymorph) and di‐μ‐tri­fluoro­acetato‐bis­[di­carbonyl­(pyridine)­ruthenium(I)]

The syntheses and crystal structure determinations of a pair of `sawhorse' dimers are reported, viz. [Ru₂(C₆H₅CO₂)₂(C₅H₅N)₂(CO)₄] [a new polymorph, cf. Kepert, Deacon, Spiccia, Fallon, Skelton & White (2000). J. Chem. Soc. Dalton Trans. pp. 2867–2874] and [Ru₂(CF₃CO₂)₂(C₅H₅N)₂(CO)₄]. The Ru⋯Ru distances are 2.6724 (2) and 2.7122 (5) Å, respectively.     

Elucidating the hard/soft acid/base principle: a perspective based on half-reactions

A comprehensive analysis is presented for the acid-base double-exchange reaction as well as the associated acid-displacement and base-displacement "half-reactions" with the goal of elucidating the meaning of the hard/soft acid/base (HSAB) principle and the conditions for its validity. When electron-transfer effects are important and other effects are negligible, the HSAB principle is driven by the surpassing stability of the soft acid/soft base product. When electrostatic effects dominate the reactivity, the HSAB principle is driven by the surpassing stability of the hard acid/hard base product. Because electron-transfer effects favor soft/soft interactions, while electrostatic effects favor hard/hard interactions, acid-base exchange reactions may be used to determine whether a reagent's reactivity is dominated by electron-transfer or by electrostatic effects. Because electron-transfer and electrostatic considerations separately favor the HSAB principle whenever the electronic chemical potentials of the acids and bases involved in the reaction are similar, our analysis provides strong support for the HSAB principle. The electronic chemical potential measures the intrinsic strength of acids and bases.