Discovery of a small molecule that inhibits the interaction of anthrax edema factor with its cellular activator, calmodulin

The catalytic efficiency of adenylyl cyclase activity of edema factor (EF) from Bacillus anthracis is enhanced by approximately 1000-fold upon its binding to mammalian protein calmodulin (CaM). A tandem cell-based and protein binding-based screen of a 10,000 member library identified a molecule that inhibits the EF-CaM interaction and therefore the adenylyl cyclase activity. A combination of fluorescence spectroscopy and photolabeling studies showed that the molecule targets the CaM binding region of EF. A series of related compounds were synthesized and evaluated to identify one compound, 4-[4-(4-nitrophenyl)-thiazolylamino]-benzenesulfonamide, that maintained activity against EF but showed minimal toxicity to two cultured cell lines. This compound represents an important reagent to study the role of EF in anthrax pathology and may represent a drug lead against anthrax infection.     

Fragmentation and reaction processes in cluster-surface collisions

We review the processes which have been observed from collisions between alkali-halide clusters and solid surfaces. Soft impact of nanocrystalline Na_nF _n?1 ⁺ clusters against solid surfaces causes them to cleave along the lowest energy (100) plane. At higher collision energies (E_i>1 eV/atom), an evaporative cascade occurs which is characteristic of a transformation of the nanocrystal to a molten state. Efficient F^? transfer from the cluster to the surface can occur for the larger clusters (>60 atoms) scattering from Si(111), in direct competition with the cleaving channel at low energies. In this regime, strong bonds can form between the F^? and silicon surface. The reaction probability increases with cluster size indicating that an impact-initiated shock wave is needed to enhance the reactive process.     

Application of recombinant phage display antibody system in study of Codakia orbicularis gill proteins

We used the recombinant phage display antibody system (RPAS) to obtain chimeric single-chain fragment variable (ScFv) antibodies to gill proteins of the white clam Codakia orbicularis (Linné, 1758). After three rounds of selection on immunotubes loaded with total gill protein extract, recombinant phages exhibiting antibodies to gill proteins were isolated and tested by enzyme-linked immunosorbent assay (ELISA). Clones exhibiting a high affinity for the mollusk proteins were selected for production of soluble ScFv antibodies, which were purified for subsequent analysis. ScFv antibodies exhibited a reaction specific for a protein whose molecular mass was about 15,000 Daltons and that was detected by the antigen capture technique followed by sodium dodecyl sulfate polyacrylamide gel electrophoresis and Western blotting.     

Liquid chromatographic analysis of vitamin B6 in reconstituted infant formula: collaborative study

A liquid chromatographic (LC) method was validated for the determination of total vitamin B6 in infant formula. Total vitamin B6 was quantified by converting the phosphorylated and free vitamers into pyridoxine. Pyridoxine was determined by ion pair reversed-phase LC with fluorescence detection. The method was subjected to an AOAC collaborative study involving a factory-manufactured, milk- and soy-based infant formula. Each was spiked at 3 concentrations in the range of 0-1 microg/g and sent as blind duplicate to participant laboratories. Nine laboratories returned valid data which were statistically analyzed for outliers and precision parameters. The repeatability relative standard deviation (RSD(r)) ranges were 2.0-4.0 and 3.5-5.9% for fortified milk- and soy-based formulas, respectively. The reproducibility relative standard deviation (RSD(R)) ranges were 8.2-8.4 and 6.7-11.2% for fortified milk- and soy-based formulas, respectively. HORRAT values ranged from 0.42 to 0.53, indicating that the precision of the method is acceptable. The mean RSD(r):RSD(R) values were 0.60 and 0.55 for milk- and soy-based formulas, respectively. As expected, RSDs for the unfortified samples were higher, but their HORRAT values (0.81 and 2.06) helped define a realistic limit of quantitation as 0.05 microg/g. Recovery data were quantitative and varied between 81.4 and 98.0% (mean = 89.8%) for each of 6 spiked materials.     

Saturation of Berge hypergraphs

Given a graph $F$, a hypergraph is a Berge- $F$ if it can be obtained by expanding each edge in $F$ to a hyperedge containing it. A hypergraph $H$ is Berge-$F$-saturated if $H$ does not contain a subhypergraph that is a Berge-$F$, but for any edge $e\in E\left(\overline{H}\right)$, $H+e$ does. The $k$-uniform saturation number of Berge-$F$ is the minimum number of edges in a $k$-uniform Berge-$F$-saturated hypergraph on $n$ vertices. For $k=2$ this definition coincides with the classical definition of saturation for graphs. In this paper we study the saturation numbers for Berge triangles, paths, cycles, stars and matchings in $k$-uniform hypergraphs.     

Thermal studies for preparation of Nb10Hf1Ti Alloy

The aim of this work is to evaluate the feasibility of preparation of Nb10Hf1Ti alloy by magnesiothermic reduction of its oxides. DTA studies were conducted to identify the reduction temperature for co reduction of the mixed oxides of Nb₂O₅, HfO₂, and TiO₂ by magnesium under reducing atmosphere. Based on DTA analysis, experiments were carried out to prepare Nb10Hf1Ti alloy by magnesiothermic reduction of their oxides at 750 °C. The reduced product was analyzed for its phases by X-ray diffraction. The excess Mg was leached out, the alloy mixture was vacuum dried, pelletized, sintered, and electron beam melted to get a consolidated alloy of the required composition. The alloy was characterized using different techniques such as optical microscopy, scanning electron microscopy, and chemical analysis. Microstructural observations revealed the formation of coarse grain structure in the consolidated alloy. The alloy product was also evaluated for its micro hardness.     

Correlation of the Solubilizing Abilities of 1-Butyl-1-methyl-pyrrolidinium Tris(pentafluoroethyl)trifluorophosphate, 1-Butyl-1-methylpyrrolidinium Triflate and 1-Methoxyethyl-1-methylmorpholinium Tris(pentafluoroethyl)trifluorophosphate

Chromatographic retention data were measured for a wide range of organic solutes on 1-butyl-1-methylpyrolidinium tris(pentafluoroethyl)trifluorophosphate ([BMPyrr]⁺[FAP]^?), 1-butyl-1-methylpyrrolidinium triflate, ([BMPyrr]⁺[Trif]^?), and 1-methoxyethyl-1-methylmorpholinium tris(pentafluoroethyl)trifluorophosphate, ([MeoeMMorp]⁺[FAP]^?), stationary phases at (323, 353 and 383) K. The measured retention factors were combined with published infinite dilution activity coefficient and gas-to-water partition coefficient data to yield gas-to-anhydrous ionic liquid (IL) and water-to-anhydrous IL partition coefficients. The three sets of partition coefficients were analyzed using the Abraham model. The derived Abraham model correlations describe the observed gas-to-IL (log₁₀ K) and water-to-IL (log₁₀ P) partition coefficient data to within average standard deviations of about 0.11 and 0.15 log₁₀ units, respectively.     

ADSORPTION OF SURFACE-ACTIVE AGENTS FROM AQUEOUS SOLUTION: HYDROPHOBIC SUBSTRATES∗

Isotherms for the adsorption of sodium dodecyl benzene sulfonate, sodium POE (4) nonyl phenol sulfate, and POE (25) nonyl phenol, on the hydrophobic crystalline herbicides atrazine and cyanazine were determined. Anionic surfactants were measured at 5°, 25°, and 50° C; the nonionic surfactant at 25° C only. Low degrees of surface coverage were observed; in only one case (atra-zine/NaDBS) was monolayer coverage approached. On the other hand, adsorption was accompanied by a significant increase in negative zeta potential. Although DLVO calculations suggest that this adsorption should lead to stable aggregates, these are of such size that gravitational effects overpower the DLVO terms.