Experimental and theoretical multiple kinetic isotope effects for an SN2 reaction. An attempt to determine transition-state structure and the ability of theoretical methods to predict experimental kinetic isotope effects

The secondary alpha-deuterium, the secondary beta-deuterium, the chlorine leaving-group, the nucleophile secondary nitrogen, the nucleophile (12)C/(13)C carbon, and the (11)C/(14)C alpha-carbon kinetic isotope effects (KIEs) and activation parameters have been measured for the S(N)2 reaction between tetrabutylammonium cyanide and ethyl chloride in DMSO at 30 degrees C. Then, thirty-nine readily available different theoretical methods, both including and excluding solvent, were used to calculate the structure of the transition state, the activation energy, and the kinetic isotope effects for the reaction. A comparison of the experimental and theoretical results by using semiempirical, ab initio, and density functional theory methods has shown that the density functional methods are most successful in calculating the experimental isotope effects. With two exceptions, including solvent in the calculation does not improve the fit with the experimental KIEs. Finally, none of the transition states and force constants obtained from the theoretical methods was able to predict all six of the KIEs found by experiment. Moreover, none of the calculated transition structures, which are all early and loose, agree with the late (product-like) transition-state structure suggested by interpreting the experimental KIEs.     

Characterisation of two novel cyclodextrinases using on-line microdialysis sampling with high-performance anion exchange chromatography

In this work, a real-time sampling/analytical method for on-line measurements of two newly discovered cyclomaltodextrinases (CDases) has been developed and evaluated. This novel methodology not only allows the final products to be investigated, but it also reveals enzyme-specific differences in the degradation pathways during the hydrolysis of different substrates, which is a great advantage in the important tasks of investigating the mechanisms of and classifying new hydrolases, and is an advantage that conventional techniques cannot offer. Two different enzymes, one CDase from Laceyella sacchari (LsCda13) and one from Anoxybacillus flavithermus (AfCda13), were investigated during the hydrolysis of α-, β- and γ-cyclodextrin, and the hydrolysis products were sampled via a microdialysis probe and injected on-line every 30 min into a high-performance anion exchange chromatography system equipped with a pulsed amperometric detector (HPAEC–PAD), where they were identified. The enzymes yielded the same end-products, maltose and glucose, in an approximate molar ratio of 2:1, but they exhibited distinctly different patterns of intermediate product formation before reaching the end-point. LsCda13 had a more random distribution of the intermediate products, whereas AfCda13 showed the distinct intermediate production of maltotriose, which in some cases accumulated.     

An easily accessible isoindigo-based polymer for high-performance polymer solar cells

A new, low-band-gap alternating copolymer consisting of terthiophene and isoindigo has been designed and synthesized. Solar cells based on this polymer and PC(71)BM show a power conversion efficiency of 6.3%, which is a record for polymer solar cells based on a polymer with an optical band gap below 1.5 eV. This work demonstrates the great potential of isoindigo moieties as electron-deficient units for building donor-acceptor-type polymers for high-performance polymer solar cells.     

Valence-band electronic structure of iron phthalocyanine: an experimental and theoretical photoelectron spectroscopy study

The electronic structure of iron phthalocyanine (FePc) in the valence region was examined within a joint theoretical-experimental collaboration. Particular emphasis was placed on the determination of the energy position of the Fe 3d levels in proximity of the highest occupied molecular orbital (HOMO). Photoelectron spectroscopy (PES) measurements were performed on FePc in gas phase at several photon energies in the interval between 21 and 150 eV. Significant variations of the relative intensities were observed, indicating a different elemental and atomic orbital composition of the highest lying spectral features. The electronic structure of a single FePc molecule was first computed by quantum chemical calculations by means of density functional theory (DFT). The hybrid Becke 3-parameter, Lee, Yang and Parr (B3LYP) functional and the semilocal 1996 functional of Perdew, Burke and Ernzerhof (PBE) of the generalized gradient approximation (GGA-)type, exchange-correlation functionals were used. The DFT/B3LYP calculations find that the HOMO is a doubly occupied π-type orbital formed by the carbon 2p electrons, and the HOMO-1 is a mixing of carbon 2p and iron 3d electrons. In contrast, the DFT/PBE calculations find an iron 3d contribution in the HOMO. The experimental photoelectron spectra of the valence band taken at different energies were simulated by means of the Gelius model, taking into account the atomic subshell photoionization cross sections. Moreover, calculations of the electronic structure of FePc using the GGA+U method were performed, where the strong correlations of the Fe 3d electronic states were incorporated through the Hubbard model. Through a comparison with our quantum chemical calculations we find that the best agreement with the experimental results is obtained for a U(eff) value of 5 eV.     

Dynamic control of surface energy and topography of microstructured conducting polymer films

Microstructured polymer surfaces, including conducting and insulating polymers, have been prepared to achieve electrochemical control of the surface energy and topography. The reported surface switches include pillar- and mesh-like surface patterns of polypyrrole (PPy), poly(3,4-ethylene-dioxythiophene) (PEDOT), and photoresists. The structures have been evaluated by contact angle measurements and optical and scanning electron microscopy to determine the surfaces characteristics. These microstructured polymer surface switches can be electrochemically modified from dewetting to wetting conditions, with a maximum associated change of the water contact angle from 129 degrees to 44 degrees . This contact angle switching was observed for samples in which dynamic control of the surface topography and surface tension was coupled. Control of topography was achieved with a dynamic height-switching range of more than 3 mum. In addition, dynamic control of anisotropic wetting is reported. Our experiments were carried out under conditions that are suitable for a biointerface, implying potential application in biotechnology and cell science. In particular, switching of the energy, chemistry, and topography of the surface, along with their associated orientation, are interesting features for dynamic (electronic) control of the seeding and proliferation for living cells. The technology reported promises for electronically controlled cell-growth within Petri dishes, well plates, and other cell-hosting tools.     

Degradable Polymers. I. Synthesis,Characterization, and Long-Term in Vitro Degradation of a 14C-Labeled Aliphatic Polyester

Poly(tetramethylene adipate) has been synthesized with and without ¹⁴C labeling at different molecular weights. Degradation tests of the labeled powder inoculated with microorganisms showed a decrease in molecular weight (GPC) and first an increase and later a decrease of crystallinity (DSC). These changes also occurred in the inoculated material, and the results indicate that the degradation process was abiotic hydrolysis which first takes place in the amorphous region. The radioactivity measurements showed that the microorganisms are able to degrade further the oligomers formed during the hydrolysis. The rate of degradation is related to the molecular weight. Unlabeled poly(tetramethylene adipate) was extruded and cold drawn to yield oriented fibers. These fibers retained more than 50% of the original tensile strength during 100 days of abiotic in vitro hydrolysis.     

An electronic signature of hydrolysation in the X-ray absorption spectrum of aqueous formaldehyde

Formaldehyde in aqueous solution is hydrolysed and forms methanediol. Using X-ray absorption spectroscopy we show that the hydrolysation product can be identified by a distinct electronic signature in the spectra. This is manifested by the disappearance of the oxygen 1s → π* absorption line. The X-ray absorption spectrum of aqueous formaldehyde is compared with those of the structurally similar formamide and urea, which are in contrast not hydrolysed in aqueous solution. We thereby demonstrate the exceptional sensitivity and simplicity of the technique to monitor this fundamental process in the aqueous phase.     

Absence of mutual unbounded growth for almost all parameter values in the two-type Richardson model

We study the two-type Richardson model on , d2, in the asymmetric case where the two particle types have different infection rates. Starting with a single particle of each type, and fixing the infection rate for one of the types, we show that mutual unbounded growth has probability 0 for all but at most countably many values of the other type's infection rate.     

Restricted self-diffusion of water in a highly concentrated w/o emulsion studied using modulated gradient spin-echo NMR

Restricted diffusion of water in a highly concentrated w/o emulsion was studied using pulsed field gradient spin echo techniques. The standard two-pulse version of this technique, suitable for analysis in the time domain, fails to investigate the short time-scale for diffusion inside a single emulsion droplet with radius 0.7 microm. With a pulse-train technique, originally introduced by Callaghan and Stepisnik, shorter time-scales are accessible. The latter approach is analyzed in the frequency domain and yields frequency dependent diffusion coefficients. Predictions for the outcome of the experiment were calculated in the time domain using the Gaussian phase distribution and the pore hopping formalism expressions for the echo attenuation. The results of these calculations were transformed to the frequency domain via a numerical inverse integral transform in order to compare with the experimental results.