Fluorescence Interaction and Determination of Calf Thymus DNA with Two Ethidium Derivatives

In this paper, we reported the syntheses and investigation of the modes of binding to DNA of the two new ethidium derivatives containing benzoyl and phenylacetyl groups of both amines at 3-and 8- positions. The interactions between calf thymus DNA (ct-DNA) and the two derivatives, 3,8-dibenzoylamino-5-ethyl-6-phenylphenantridinium cloride (E2) and 3,8-diphenylacetylamino-5-ethyl-6-phenylphenantridinium chloride (E3), were investigated by fluorescence quenching spectra and UV-vis absorption spectra. The Stern-Volmer quenching constants, binding constants, binding sites and the corresponding thermodynamic parameters ΔH, ΔS and ΔG were calculated at different temperatures. The results indicated the formation of E2 and E3-DNA complexes and van der Waals interactions as the predominant intermolecular forces in stabilizing for each complex. In addition, increasing nucleophilicity of the functional groups at 3- and 8- positions exhibited the respectable increment the DNA binding affinities of derivatives. The results of absorption, ionic strength and iodide ion quenching suggested that the interaction mode of E2 and E3 with ct-DNA was intercalative binding. The limit of detection (LOD) of ct-DNA were 7.49 × 10⁻⁸ (n = 4) and 4.18 × 10⁻⁸ mol/l (n = 7) in presence of E2 and E3, respectively.     

Photodissociation studies of the electronic and vibrational spectroscopy of Ni(+)(H2O)

The electronic spectrum of Ni?(H?O) has been measured from 16200 to 18000 cm?1 using photofragment spectroscopy. Transitions to two excited electronic states are observed; they are sufficiently long-lived that the spectrum is vibrationally and partially rotationally resolved. An extended progression in the metal-ligand stretch is observed, and the absolute vibrational quantum numbering is assigned by comparing isotopic shifts between ??Ni?(H?O) and ??Ni?(H?O). Time-dependent density functional calculations aid in assigning the spectrum. Two electronic transitions are observed, from the 2A? ground state (which correlates to the 2D, 3d? ground state of Ni?) to the 32A? and 22A? excited states. These states are nearly degenerate and correlate to the 2F, 3d?4s excited state of Ni?. Both transitions are quite weak, but surprisingly, the transition to the 2A? state is stronger, although it is symmetry-forbidden. The 3d?4s states of Ni? interact less strongly with water than does the ground state; therefore, the excited states observed are less tightly bound and have a longer metal-ligand bond than the ground state. Calculations at the CCSD(T)/aug-cc-pVTZ level predict that binding to Ni? increases the H-O-H angle in water from 104.2 to 107.5° as the metal removes electron density from the oxygen lone pairs. The photodissociation spectrum shows well-resolved rotational structure due to rotation about the Ni-O axis. This permits determination of the spin rotation constants ε(αα)' = -12 cm?1 and ε(αα)' = -3 cm?1 and the excited state rotational constant A' = 14.5 cm?1. This implies a H-O-H angle of 104 ± 1° in the 22A? excited state. The O-H stretching frequencies of the ground state of Ni?(H?O) were measured by combining IR excitation with visible photodissociation in a double resonance experiment. The O-H symmetric stretch is ν?' = 3616.5 cm?1; the antisymmetric stretch is ν?' = 3688 cm?1. These values are 40 and 68 cm?1 lower, respectively, than those in bare H?O.     

Synthesis of asymmetrical tridendate Schiff bases and metal complexes and investigation of anticarcinogen effects on human colon and cervical cancers

The metal complexes of Zn(II), Ni(II), Cu(II) and Pb(II) with asymmetrical Schiff bases were synthesized. The asymmetrical Schiff base was obtained through the condensation of 1,2-phenylenediamine, 4-methyl-1,2-phenylenediamine, 2-hydroxy-1-napthaldehyde and biphenyl-4-carbaldehyde. The new Schiff base ligands (L₁' and L₂') and their metal complexes were characterized by TG/DTG, FT-IR, ¹H-NMR, UV–Vis, ESR, powder XRD, elemental analysis, magnetic moment and fluorescence studies. The powder XRD studies indicate that Co(II) and Cu(II) complexes are amorphous, while Ni(II) and Zn(II) complexes are crystalline. The anticarcinogenic effects of L₁' and L₂' were also investigated against colon (SW-620) and cervical cancer (HeLa) cell lines and compound L₂' was found to possess the highest anticarcinogenic potential, with 16.7 µM and 27.5 µM of IC₅₀ values for HeLa and SW620 cells, respectively.     

Immobilization of Two Azacrown Ethers on Chitosan: Evaluation of Selective Extraction Ability Toward Cu(II) and Ni(II)

Two Schiff base-type chitosan-azacrown ethers were prepared by a reaction of chitosan (CTS) with N-(4′-formylphenyl)aza-crown ethers, and they were converted to secondary-amino derivatives by the reduction of CTS-azacrown ethers with sodium borohydride. Their structures were confirmed by elemental analysis, infrared spectra and thermogravimetric analysis. The ability of these adsorbents to extract Cu(II) and Ni(II) ions from water by a solid-liquid extraction process was studied. The effects of adsorbent amount, contact time and pH on the adsorption of CTS-azacrown ethers were investigated. The extraction results showed that CTS-azacrown ethers had good sorption capacities for Cu(II) ions in the coexistence of Ni(II) ions.     

Bacteriophages as Templates for Manufacturing Supramolecular Structures

SS phages are genetically enginnered by replacing 2 N‐terminal amino acids of the p8 coat protein of the fd phage. AGE and zeta potential measurements show that SS phages carry at least 1/4 less net negative surface charge than fd phages. Morphology and thickness of phages are studied at different counterion concentrations (10^?3, 10^?2 and 10^?1 M ) by AFM, SEM and immunofluorescence analyses. Bundles induced by CoCl₂ and CaCl₂ are either metallized by chemical reduction or biomineralized for apatite‐like material formation. EDX spectroscopy confirms the presence of Co, P and Ca peaks in mineralized samples. Such bottom‐up manufactured phage scaffolds might be applied in bioengineering studies.

     

In Vitro Effects of Isoorientin,Forsythoside B,and Verbascoside on Bovine Kidney Cortex Glutathione Reductase

Glutathione reductase (GR; E.C 1.6.4.2) catalyzes the reduction of oxidized glutathione to reduced glutathione by the nicotinamide adenine dinucleotide phosphate (NADPH) dependent mechanism. GR participates in the protection of the cell from the toxic effects of free radicals. In this study, we have investigated in vitro effects of isoorientin (C‐glycosyl flavonoid), verbascoside, and forsythoside B (phenylethanoids) on purified bovine kidney cortex GR. These compounds present in many plant species that have been used as medicinal plants and have an interesting spectrum of biological activity. We have demonstrated that these compounds inhibit bovine kidney cortex GR in a concentration‐dependent manner. Kinetic characterization of the inhibition is also done. Isoorientin is a noncompetitive inhibitor with respect to both glutathione disulfide (GSSG) (Ki_GSSG 0.023 ± 0.001 mM) and NADPH (Ki_NADPH 0.032 ± 0.001 mM). Forsythoside B acts as an uncompetitive inhibitor with respect to GSSG (Ki_GSSG 0.20 ± 0.014 mM) and NADPH (Ki_NADPH 0.267 ± 0.028 mM). Verbascoside acts as an uncompetitive inhibitor with respect to both GSSG (Ki_GSSG 0.242 ± 0.024 mM) and NADPH (Ki_NADPH 0.175 ± 0.016 mM). Inhibition of GR causes accumulation of reactive oxygen species and depletion of the glutathione pool. Inhibition of this enzyme may be significant in drug resistance.     

Optical and electronic properties of fluorene‐based copolymers and their sensory applications

A series of novel, fluorene‐based conjugated copolymers, poly[(9,9‐bis{propenyl}‐9H‐fluorene)‐co‐(9,9‐dihexyl‐9H‐fluorene)] ( P1 ), poly[(9,9‐bis{carboxymethylsulfonyl‐propyl}fluorenyl‐2,7‐diyl)‐co‐(9,9‐dihexyl‐9H‐fluorene)] ( P2 ) and poly[(9,9‐dihexylfluorene)‐co‐alt‐(9,9‐bis‐(6‐azidohexyl)fluorene)] ( P3 ), are synthesized by Suzuki coupling reactions and their electrochemical properties, in the form of films, are investigated using cyclic voltammetry. The results reveal that the polymer films exhibit electrochromic properties with a pseudo‐reversible redox behavior; transparent in the neutral state and dark violet in the oxidized state. Among the three polymers, P2 possesses the shortest response time and the highest coloration efficiency value. These polymers emit blue light with a band gap value of around 2.9 eV and have high fluorescent quantum yields. Their metal ion sensory abilities are also investigated by titrating them with a number of different transition metal ions; all of these polymers exhibit a higher selectivity toward Fe³⁺ ions than the other ions tested with Stern–Volmer constants of 4.41 × 10⁶M^?1, 3.28 × 10⁷M^?1, 1.25 × 10⁶M^?1, and 6.56 × 10⁶M^?1 for P1 , P2 , water soluble version of P2 ( P2S ) and P3 , respectively. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2013     

Distance-Dependent Metal-Enhanced Intrinsic Fluorescence of Proteins Using Polyelectrolyte Layer-by-Layer Assembly and Aluminum Nanoparticles

Previously reported studies indicate that aluminum nanostructured substrates can potentially find widespread use in metal-enhanced fluorescence (MEF) applications particularly in the UV or near-UV spectral region toward label-free detection of biomolecules. MEF largely depends on several factors, such as chemical nature, size, shape of the nanostructure and its distance from the fluorophore. A detailed understanding of the MEF and its distance-dependence are important for its potential application in biomedical sensing. Our goal is to utilize intrinsic protein fluorescence for label-free binding assays. This is made possible by the use of metallic nanostructures which provide localized excitation and enhanced fluorescence of UV fluorophores and will also provide a way to separate the surface-bound proteins from the bulk samples. We evaluated varied probe distances from plasmonic nanostructures by the well-established layer-by-layer (LbL) technique. The investigated proteins were adsorbed on different numbers of alternate layers of poly(styrene sulfonate) (PSS) and poly(allylamine hydrochloride) (PAH). Bovine serum albumin (BSA) was electrostatically attached to the positively charged PAH layer, and goat and rabbit IgG were attached to negatively charged PSS layer. We obtained a maximum of a ~ 9 fold increase in fluorescence intensity from BSA at a distance of ~9 nm from the Al nanostructured surface. Approximately 6- and 7- fold increases were observed from goat and rabbit IgG at a distance of ~8 nm, respectively. The minimum lifetimes were about 3-fold shorter than those on bare control quartz slides for all three proteins. The time-resolved intensity decays were analyzed with a lifetime distribution model to understand the distance effect on the metal-fluorophore interaction in detail. The present study indicates the distance dependence nature of metal-enhanced intrinsic fluorescence of proteins and potential of LbL assembly to control the metal-to-fluorophore distance in the UV wavelength region.     

Effects of ultrasonic energy on the wash fastness of reactive dyes

The field of ultrasonic is still making strides towards perfection, but already many applications of ultrasonic energy have been found in science and technology. There is also a field called sonochemistry where ultrasonic energy is used to create some chemical and mechanical effects on matter immersed or solved in liquids. It was presumed that ultrasonic textile washing could be a competitive alternative to conventional textile washing techniques; and as such the following experiments were conducted. In this study, the effects of ultrasonic energy on the wash fastness of reactive dyes, which have three different reactive groups, were investigated. After dyeing with the conventional method, the samples were applied with three types of washing processes simultaneously (conventional, ultrasonic probe and ultrasonic bath) and comparisons were made. Three different fixing agents were used in the washing processes. Colourfastness, staining fastness, magnitude of total colour difference (DeltaE) and lightness difference of the colour (DeltaL) values of dyed samples were measured.