Highly Isospecific Polymerization of Silyl‐Protected ω‐Alkenols Using an [OSSO]‐Type Bis(phenolato) Dichloro Zirconium(IV) Precatalyst

The coordination polymerization of silyl‐protected ω‐alkenols such as ω‐alken‐α‐oxytriisopropylsilanes 1 provides poly(ω‐alkenyl‐α‐oxytriisopropylsilalne)s with a highly isospecific microstructure ([mmmm] > 95%) when a combination of [OSSO]‐type bis(phenolato) dichloro zirconium(IV) complex 2 and dried methylaluminoxane is used as the precatalyst and activator, respectively. The resulting siloxy‐substituted polymers could be efficiently transformed into the corresponding functionalized polyolefins, which contained up to 90% acetyl groups and ≈7% hydroxy groups in the terminal side chains.

     

Optical Analysis and Qualitative Discrimination of Vortex-Flame Interaction in a Plane Premixed Shear Layer

To obtain practical schemes of vortex–flame interactions, a series of organized eddies formed in the plane premixed shear layer is investigated, instead of a single vortex ring or a single vortex tube. The plane premixed shear layer is first formed between two parallel uniform propane–air mixture streams. For getting clear qualitative pictures of vortex–flame interactions in the plane premixed shear layer, two extreme ignition points are assigned; one is assigned at the center of an organized eddy where the vortex motion plays an important role, the other at the midpoint between two adjacent organized eddies where the rolling-up motion prevails. A premixed flame is initiated by an electric discharge at one of the two assigned points and propagates either in the large scale organized eddy or along the interface between two uniform mixture streams. Propagation and deformation processes of the flame are observed using the simultaneously two-directional and high-speed Schlieren photography. The tangential velocity of organized eddy and the equivalence ratio of premixed shear flow are varied as two main parameters. The outline of propagating flame after the midpoint ignition is numerically analyzed by superposing the flame propagation having a constant burning velocity on the vortex flow field simulated with the discrete vortex method. The results obtained show that there exists another type of vortex–flame interaction in the plane shear layer in addition to the vortex bursting, and that it is caused by the rolling-up motion particular to the coherent structure in the plane shear layer and is simply named the vortex boosting. It is qualitatively concluded therefore that, in the ordinary turbulent premixed flames formed in the plane premixed shear layer, these two fundamental vortex-flame interactions get tangled with each other to augment the propagation velocity. An empirical expression which qualitatively takes into account of the effects of both vortex and chemical properties is finally proposed.     

Various Au nanoparticle organizations fabricated through SiO2 monomer induced self-assembly

A novel method has been developed to fabricate the assembly of Au colloidal nanoparticles (NPs) using SiO(2) monomers. The key strategy was the use of a controlled sol-gel procedure including hydrolysis, deposition, and condensation of tetraethyl orthosilicate (TEOS). Namely, the assembly of Au NPs was created by the anisotropic deposition of SiO(2) monomers and subsequent permanent fixing by the growth of a SiO(2) shell. Various assemblies of Au NPs such as dimer, trimer, and pearl-chain morphology were fabricated by systematically changing the concentration and injection speed of TEOS. A longitudinal plasmon resonance band was observed as a result of the assembly of Au NPs and can be tuned from visible to near-infrared by altering the length of pearl-chain morphology. In addition, single Au NP was homogeneously coated with a SiO(2) shell by means of controlling the deposition rate of SiO(2) monomers during a Sto?ber synthesis without the use of a silane coupling agent or bulk polymer as the surface primer to render the Au surface vitreophilic. The Au NPs (mean size 11.4 nm in diameter) were thus encapsulated into SiO(2) beads with a wide range of sizes (from 20 to 50 nm in diameter). These pure SiO(2)-coated Au beads with tunable shell thickness should be crucial for biosensors, particularly as Raman-tag particles.     

Synthesis of tri- or tetrasubstituted pyrimidine derivatives through the [5+1] annulation of enamidines with either N,N-dimethylformamide dialkyl acetals or orthoesters and their application in a ring transformation of pyrimidines to pyrido[2,3-d]pyrimidin-5-one derivatives

The [5+1] annulation of enamidines, which were prepared from functionalized silanes, organolithium compounds and two nitriles, with N,N-dimethylformamide dialkyl acetals as the C1 unit is described, leading to the synthesis of tri- and tetrasubstituted pyrimidine derivatives under catalyst- and solvent-free reaction conditions. Furthermore, the [5+1] annulation of enamidines by using orthoesters as the C1 unit is described, in which catalytic amounts of ZnBr(2) catalyze the annulation to produce polysubstituted pyrimidines under toluene or xylene reflux conditions. Moreover, the combination of a reductive ring-opening reaction with [Mo(CO)(6)] and a subsequent intramolecular cyclization with tBuOK effectively causes a skeletal transformation from the pyrimidines containing an isoxazolyl and an ethoxy substituent to form pyrido[2,3-d]pyrimidin-5-one frameworks in excellent yield.     

DNA-binding small-ligand-immobilized surface plasmon resonance biosensor for detecting thymine-related single-nucleotide polymorphisms

A surface plasmon resonance (SPR) biosensor that carries DNA-binding small ligands has been developed for the detection of single-nucleotide polymorphisms (SNPs). 3,5-Diaminopyrazine derivatives, with a hydrogen-bonding profile fully complementary to the thymine base, were utilized as recognition elements on the sensor surface, and a target single-stranded DNA sequence was hybridized with a DNA probe containing an abasic site to place this site opposite a nucleobase to be detected. In a continuous flow of sample solutions buffered to pH 6.4 (0.25 M NaCl), the 3,5-diaminopyrazine-based SPR sensor can detect an orphan nucleobase in the duplex with a clear selectivity for thymine over cytosine, guanine, and adenine (5'-GTT GGA GCT GXG GGC GTA GGC-3'/3'-CAA CCT CGA CNC CCG CAT CCG-5'; X=abasic site, N=target nucleobase G, C, A, or T). The SPR response was linear in the concentration range 10-100 nM. Allele discrimination is possible based on the combination of different binding surfaces in a flow cell of the SPR system, which is demonstrated for the analysis of the thymine/cytosine mutation present in 63-meric polymerase chain reaction (PCR) amplification products (Ha-ras gene, codon 12, antisense strand). Comparison with a bulk assay based on 3,5-diaminopyrazine/DNA binding shows that the immobilization of 3,5-diaminopyrazine derivatives on the SPR sensor allows more sensitive detection of the target DNA sequence, and binding selectivity can be tuned by controlling the salt concentration of sample solutions. These features of the DNA-binding small-molecule-immobilized SPR sensor are discussed as a basis for the design of SPR biosensors for SNP genotyping.     

Soft-sputtering of insulin films in argon-cluster secondary ion mass spectrometry

In secondary ion mass spectrometry (SIMS) of organic substances, the dissociation of the sample molecules is crucial. We have developed SIMS equipment capable of bombardment, where the primary ions are argon cluster ions with kinetic energy per atom controllable down to 1 eV. We previously reported the detection of intact ions of insulin and cytochrome C using this equipment. In this paper, we present a detailed characterization of the emission of secondary ions from insulin, focusing on the difference in secondary ion yield between intact ions and fragment ions by varying the incident angle of the cluster ions. The emission intensity of the intact ions was changed drastically due to the exposed dosage and incident angle of the cluster ions in contrast to the fragment ions. We discuss these results based on the manner in which the argon-cluster ions collide with the organic solid.     

Label-free molecular beacon system based on DNAs containing abasic sites and fluorescent ligands that bind abasic sites

A new class of label-free molecular beacon (MB) system based on DNA strands that contain abasic (AP) sites (AP-DNA) and adopt stem-loop structures, in combination with fluorescent ligands that bind these AP sites, has been developed. Unlike a conventional MB, which requires covalent labeling of the MB with a fluorophore and a quencher, the developed system (APMB) does not require covalent attachment of signal transduction units. Detailed sensing functions of a series of APMB systems were examined with the aid of the fluorescent ligand named ATMND to provide insight into the design strategy for APMB systems. The effects of the stem length and the position of the AP site in the stem moiety on the fluorescence response of the APMB system were examined. Genotyping of a G/C SNP of PCR amplification products was successfully demonstrated with the APMB system and blue-fluorescent ATMND as a ligand. The APMB system was further extended to a system that utilized green-fluorescent lumiflavin.     

Functionalization of mesoporous silica membrane with a Schiff base fluorophore for Cu(II) ion sensing

A Schiff base (SB) immobilized hybrid mesoporous silica membrane (SB-HMM) was prepared by immobilizing a Schiff base onto the pore surface of mesoporous silica (pore size=3.1 nm) embedded in the pores of a porous anodic alumina membrane. In contrast to the non-fluorescent analogous SB molecule in homogeneous solutions, SB-HMM exhibited intense fluorescence due to emission enhancement caused by aggregation of SB groups on the pore surface. The high quantum efficiency of the surface SB groups allows SB-HMM to function as a fluorescent sensor for Cu(II) ions in an aqueous solution with good sensitivity, selectivity and reproducibility. Under the optimal conditions described, the linear ranges of fluorescence intensity for Cu(II) are 1.2-13.8(M (R(2)=0.993) and 19.4-60 (R(2)=0.992) (M. The limit of detection for Cu(II) is 0.8 μM on basis of the definition by IUPAC (C(LOD)=3.3S(b)/m).     

Cu-mediated chemoselective trifluoromethylation of benzyl bromides using shelf-stable electrophilic trifluoromethylating reagents

Copper-mediated chemoselective trifluoromethylation at the benzylic position by the use of shelf-stable electrophilic trifluoromethylating reagents 3 in good to high yields under mild conditions is described for the first time. The generality of this trifluoromethylation for a wide variety of benzyl bromides facilitates the rapid creation of structural diversity of medicinal candidates in drug discovery.