Electrochemical Affinity Sensors Using Field Effect Transducer Devices for Chemical Analysis

The review presents advances and main challenges of the affinity sensors based on field- effect transistors published during the last five years. The different nanomaterial-based field-effect transistors are classified according to the nature of the nanomaterials, beginning by silicon, the “gold-standard” semiconductor, the gallium nitride semiconductor, the organic semiconductors, the silicon nanowires, the inorganic nanomaterials, the carbon nanotubes and the graphene. Due to its exceptional electrical properties, the main works are devoted to graphene. The obtained analytical performances for the detection of biomarkers, of DNA sequences and of miRNA are listed. The relation between the operational conditions - nature of the nanomaterials, procedure of preparation, choice of the receptor molecule, method of immobilization – and the analytical performance are discussed. The perspective of industrialization of these affinity sensors based on field-effect transistors is discussed.     

Phytochrome,the Visual Pigment of Plants

Plants require light for photosynthesis. In order to adapt to the light conditions in their particular habitat, they have developed various photoreceptor systems. Of these, phytochrome allows even two-color vision in the red/far-red region. The photoreceptor phytochrome is of interest not only to botanists, but also to natural product chemists, photochemists, biochemists, photobiologists, and recently molecular biologists. Despite numerous studies, there are still considerable gaps in our knowledge of this photoreceptor. This article first describes the basic structural studies of the tetrapyrrole chromophore and its photochemical cis–trans isomerization, which is the source of the chromoprotein's photochromism. In the section on the protein moiety, beside other topics, the domain structure of phytochrome and the conformational changes during phototransformation are discussed. Finally, the known phytochrome genes are used to derive phylogenetic relationships, and possible structure–function relationships are discussed.     

Zur Synthese von Derivaten des Pyrido[1,2-a]azepins

On the Synthesis of Derivatives of Pyrido[1,2-a]lazepine The conjugated pyridinium ylides of type 4 undergo 8π -electrocyclisation affording the heterobicyclic allenes 5 which, in the presence of H₂O and H₂O₂, are subsequently transformed into the substituted pyrido[1,2-a]-azepinones 6, a novel heterocyclic system. The chemical behaviour of 6a,b is dominated by cleavage of the lactam bond and subsequent reaction to pyridinc and isoquinoline derivatives, respectively; e.g. reaction of 6a, b with 4,5-dihydro-4-methyl-3H-1,2,4-triazole-3,5-dione affords the cycloadducts 11 and 12 almost quantitatively. The successful transformation of 6b into 15 is described, the latter being the first representative of the presently unknown, potentially antiaromatic pyrido[1,2-a]azepine ( 1 ).     

Determination of metal ions by liquid chromatographic separation of their 2-acetylpyridine-4-ethyl-3-thiosemicarbazone chelates

A new thiosemicarbazone was prepared, characterized, and used as a complexing reagent for the chromatographic separation and determination of metal complexes by reverse-phase HPLC. The reagent was sufficiently soluble in methanol-water solutions for metal ions to be complexed in this aqueous organic phase, without need for extraction. Many variables affected the retention times of the metal complexes. Several metals were determined selectively by complexation with the reagent and chromatographic separation of the complexes. Interference effects from other metal ions were also investigated.     

A Molecular Circuit Regenerator to Implement Iterative Strand Displacement Operations

The predictable chemistry of Watson–Crick base-pairing imparts a unique structural programmability to DNA, enabling the facile design of molecular reactions that perform computations. However, many of the current architectures limit devices to a single operational cycle. Herein, we introduce the design of the “regenerator”, a device based on coupled enthalpic and entropic reactions that permits the regeneration of molecular circuit components.     

Chemoselectivity of Tertiary Azides in Strain-Promoted Alkyne-Azide Cycloadditions

The strain-promoted alkyne-azide cycloaddition (SPAAC) is the most commonly employed bioorthogonal reaction with applications in a broad range of fields. Over the years, several different cyclooctyne derivatives have been developed and investigated in regard to their reactivity in SPAAC reactions with azides. However, only a few studies examined the influence of structurally diverse azides on reaction kinetics. Herein, we report our investigations of the reactivity of primary, secondary, and tertiary azides with the cyclooctynes BCN and ADIBO applying experimental and computational methods. All azides show similar reaction rates with the sterically non-demanding cyclooctyne BCN. However, due to the increased steric demand of the dibenzocyclooctyne ADIBO, the reactivity of tertiary azides drops by several orders of magnitude in comparison to primary and secondary azides. We show that this chemoselective behavior of tertiary azides can be exploited to achieve semiorthogonal dual-labeling without the need for any catalyst using SPAAC exclusively.     

Et2Zn-mediated stoichiometric C(sp)-H silylation of 1-alkynes and chlorosilanes

A first example of an Et₂Zn mediated silylation of 1-aklynes is reported. A series of functional groups are tolerated in this reaction. Mechanistic studies support Zn alkynilides as intermediates in the reaction. This reaction protocol provides a practical method for the preparation of alkynylsilanes and expands the application of organometallic zinc in organic synthesis.     

Reaktionen von Silylphosphanen mit Schwefel

Reactions of Silylphosphines with Sulphur We report about reactions of Me₂P? SiMe₃ 2 , MeP(SiMe₃)₂ 3 , (Me₃Si)₃P 4 , P₂(SiMe₃)₄ 5 , and (Me₃Si)₃P₇ 1 with elemental sulphur. Without using a solvent 2 reacts very vigorously. The reactions with 3 and 4 show less reactivity which is even more reduced with 5 and 1 . With equivalent amounts of sulphur the reactions with 2 , 3 , 4 lead to compounds with highest content of sulphur. These compounds are Me₃SiS? P(S)Me₂ 9 from 2 , (Me₃SiS)₂P(S)Me 13 from 3 and (Me₃SiS)₃P(S) 16 from 4 . Besides, the by-products (Me₃Si)₂S 8 , P₂Me₄ 7 , and Me₂P(S)? P(S)Me₂ 11 can be obtained. The reactions of silylphosphines in a pentane solution run much slower so that the formation of intermediates can be observed. Reaction with 2 yields Me₃SiS? PMe₂ 6 and Me₂P(S)PMe₂ 10 , which lead to the final products in a further reaction with sulphur. From 3 (Me₃SiS)(Me₃Si)PMe 14 and (Me₃SiS)₂PMe 12 can be obtained which react with sulphur to (Me₃SiS)₂P(S)Me 13. 4 leads to the intermediates (Me₃SiS)(Me₃Si)₂P 18 , (Me₃SiS)₂(Me₃Si)P 17 , (Me₃SiS)₃P 15 yielding (Me₃SiS)₃P(S) 16 with excess sulphur. Depending on the molar ratio (P₂SiMe₃)₄ 5 reacts to (Me₃Si)₂P? P(SSiMe₃)(Sime₃), (Me₃SiS)(Me₃Si)P? P(SSiMe₃). (Diastereoisomer ratio 10:1), (Me₃SiS)₂P? P(SiMe₃)₂ and (Me₃SiS)₂P? P(SSiMe₃)(Sime₃). With the molar ratio 1:4 the reaction yields (Me₃SiS)₂P? P(SSiMe₃)₂ (main product), (Me₃SiS)₃P(S) and (Me₃SiS)₃P. All silylated silylphosphines tend to decompose under formation of (Me₃Si)₂S. (Me₃Si)₃P₇ reacts with sulphur at 20°C (15 h) under decomposition of the P₇-cage and formation of (Me₃SiS)₃P(S). The products of the reaction of 5 with sulphur in hexane solution (molar ratio more than 1:3) undergo readily further reactions at 60°C under cleavage of P? P bonds and splitting off (Me₃Si)₂S, leading to (Me₃SiS)₃P(S) and cage molecules like P₄S₃, P₄S₇, and P₄S₁₀ and P? S-polymers. (Me₃SiS)₃P(S) isi thermally unstable and decomposes to P₄S₁₀ and (Me₃Si)₂S. Sulphur-containing silylphosphines like (Me₃SiS)P(S)Me₂ react with HBr at ?78°C under formation of Me₃SiBr (quantitative cleavage of the Si? S bond) and Me₂P(S)SH, which reacts with HBr to produce H₂S and Me₂P(S)Br.