Inverse statistical problems: from the inverse Ising problem to data science

Inverse problems in statistical physics are motivated by the challenges of ‘big data’ in different fields, in particular high-throughput experiments in biology. In inverse problems, the usual procedure of statistical physics needs to be reversed: Instead of calculating observables on the basis of model parameters, we seek to infer parameters of a model based on observations. In this review, we focus on the inverse Ising problem and closely related problems, namely how to infer the coupling strengths between spins given observed spin correlations, magnetizations, or other data. We review applications of the inverse Ising problem, including the reconstruction of neural connections, protein structure determination, and the inference of gene regulatory networks. For the inverse Ising problem in equilibrium, a number of controlled and uncontrolled approximate solutions have been developed in the statistical mechanics community. A particularly strong method, pseudolikelihood, stems from statistics. We also review the inverse Ising problem in the non-equilibrium case, where the model parameters must be reconstructed based on non-equilibrium statistics.     

Modeling and waveform optimization of stick–slip micro-drives using the method of dimensionality reduction

In this paper, the dynamics of piezo-actuated stick–slip micro-drives are studied experimentally and theoretically. First, the stick–slip-based force-generating test stand is introduced, and experimental results are presented. Then, a numerical model is formulated which explicitly includes the dynamics of normal and tangential properties of the contact areas in the frictional driving elements of the drive. The contact forces are simulated using the method of dimensionality reduction. We show that the experimentally observed behavior can be described without using any fitting parameters or assuming any generalized laws of friction if the explicit contact mechanics of the frictional contacts is taken into account. Furthermore, an even simpler model of the drive is developed to get a qualitative understanding of the system. It is employed to gain a new actuation method, which reduces the vibrations of the drive’s runner and therefore enhances its performance.     

Effects of Cu2−xS phase removal on surface potential of Cu2ZnSnS4 thin-films grown by electroplating

Cu₂ZnSnS₄ (CZTS) has an optical band gap of 1.4–1.5 eV, which is similar to that of Cu(In,Ga)Se₂ (CIGS), and a high absorption coefficient (>10⁴ cm⁻¹) in the visible light region. In previous reports, CIGS thin-film solar cells have been shown to improve the performance of the device since the secondary phase is removed by Potassium cyanide (KCN) etching treatment. Therefore, in this study we applied a KCN etching treatment on CZTS and measured the effects. We confirmed the removal of Cu_2−xS via Kelvin probe force microscopy (KPFM) and Raman scattering spectroscopy. The effects of the experiment indicate that we can define with precision the location of the secondary phases, and therefore the control of the secondary phases will be easier and more efficient. Such capabilities could improve the solar cell performance of CZTS thin-films.     

Correlation between crystallinity and resistive switching behavior of sputtered WO3 thin films

The as-deposited WO₃ thin films were post-annealed at different temperatures (300 °C and 600 °C) in air to investigate a correlation between crystallinity and switching behavior of WO₃ thin films. Associating the results of XRD, FTIR, XPS and FESEM measurements, the annealing-caused crystallinity change contributes to the variation of the switching behaviors of the WO₃ thin films. The as-deposited WO₃ films with low crystalline structure are preferred for random Ag conducting path, resulting in large switching ratio but fluctuating I–V hysteresis, whereas the annealed WO₃ films with crystallized compact structure limits Ag conducting path, favoring the stable I–V hysteresis but small switching ratio. It is therefore concluded that electrochemical redox reaction-controlled resistance switching depends not only on electrode materials (inert and reactive electrodes) but also on crystallinity of host oxide.     

A voltage-controlled chaotic oscillator based on carbon nanotube field-effect transistor for low-power embedded systems

This paper presents a compact and low-power-based discrete-time chaotic oscillator based on a carbon nanotube field-effect transistor implemented using Wong and Deng＇s well-known model. The chaotic circuit is composed of a nonlinear circuit that creates an adjustable chaos map, two sample and hold cells for capture and delay functions, and a voltage shifter that works as a buffer and adjusts the output voltage for feedback. The operation of the chaotic circuit is verified with the SPICE software package, which uses a supply voltage of 0.9 V at a frequency of 20 kHz. The time series, frequency spectra, transitions in phase space, sensitivity with the initial condition diagrams, and bifurcation phenomena are presented. The main advantage of this circuit is that its chaotic signal can be generated while dissipating approximately 7.8 μW of power, making it suitable for embedded systems where many chaos-signal generators are required on a single chip.     

Improved quantum state transfer via quantum partially collapsing measurements

In this work, we present a general scheme to improve quantum state transfer (QST) by taking advantage of quantum partially collapsing measurements. The scheme consists of a weak measurement performed at the initial time on the qubit encoding the state of concern and a subsequent quantum reversal measurement at a desired time on the destined qubit. We determine the strength q_r$q_r$ of the post quantum reversal measurement as a function of the strength p$p$ of the prior weak measurement and the evolution time t$t$ so that near-perfect QST can be achieved by choosing p$p$ close enough to 1, with a finite success probability, regardless of the evolution time and the distance over which the QST takes place. The merit of our scheme is twofold: it not only improves QST, but also suppresses the energy dissipation, if any.     

Universal scheme for finite-probability perfect transfer of arbitrary multispin states through spin chains

In combination with the theories of open system and quantum recovering measurement, we propose a quantum state transfer scheme using spin chains by performing two sequential operations: a projective measurement on the spins of ‘environment’ followed by suitably designed quantum recovering measurements on the spins of interest. The scheme allows perfect transfer of arbitrary multispin states through multiple parallel spin chains with finite probability. Our scheme is universal in the sense that it is state-independent and applicable to any model possessing spin–spin interactions. We also present possible methods to implement the required measurements taking into account the current experimental technologies. As applications, we consider two typical models for which the probabilities of perfect state transfer are found to be reasonably high at optimally chosen moments during the time evolution.     

Nanoscale hydrodynamic instability in a molten thin gold film induced by femtosecond laser ablation

A mechanism of the formation of a nanotip with a nanoparticle at its top that appears in a thin metal film irradiated by a single femtosecond laser pulse has been studied experimentally and theoretically. It has been found that the nanotip appears owing to a melt flow and a nanojet formation, which is cooled and solidified. Within a proposed hydrodynamic model, the development of thermocapillary instability in the melted film is treated with the use of the Kuramoto-Sivashinsky-type hydrodynamic equation. The simulation shows that the nanojet nucleates in the form of a nanopeak in a pit on the top of a microbump (linear stage) and, then, grows in a nonlinear (explosive) regime of an increase in thermocapillary instability in good agreement with experimental data.     

A planar Bézier profiled horn for reducing penetration force in ultrasonic cutting

An ultrasonic planar horn with a Bézier profile is developed. The first longitudinal displacement mode of the horn is exploited for high displacement amplification in order to reduce the penetration force required to enter and cut materials. The displacement amplification and stress distribution characteristics of the Bézier horn and the commonly used catenary horn are examined. The penetration force by the Bézier horn is nearly 75% of that by the catenary horn with a penetration speed of 0.25 mm/s during cutting a tissue stimulant. At a penetration speed of 0.5 mm/s, the penetration force by the Bézier horn is nearly 85% of that by the catenary horn for cutting a polymethylmethacrylate (PMMA) material. The decrease in the penetration force by the Bézier horn is attributed to the fact that the displacement amplification of the Bézier horn is 30% higher than that of the traditional catenary horn with the same length and end surface widths.     

Microfabrication of stacks of acoustic matching layers for 15 MHz ultrasonic transducers

This paper presents a novel method used to manufacture stacks of multiple matching layers for 15 MHz piezoelectric ultrasonic transducers, using fabrication technology derived from the MEMS industry. The acoustic matching layers were made on a silicon wafer substrate using micromachining techniques, i.e., lithography and etch, to design silicon and polymer layers with the desired acoustic properties. Two matching layer configurations were tested: a double layer structure consisting of a silicon–polymer composite and polymer and a triple layer structure consisting of silicon, composite, and polymer. The composite is a biphase material of silicon and polymer in 2-2 connectivity. The matching layers were manufactured by anisotropic wet etch of a (1 1 0)-oriented Silicon-on-Insulator wafer. The wafer was etched by KOH 40 wt%, to form 83 μm deep and 4.5 mm long trenches that were subsequently filled with Spurr’s epoxy, which has acoustic impedance 2.4 MRayl. This resulted in a stack of three layers: The silicon substrate, a silicon–polymer composite intermediate layer, and a polymer layer on the top. The stacks were bonded to PZT disks to form acoustic transducers and the acoustic performance of the fabricated transducers was tested in a pulse-echo setup, where center frequency, −6 dB relative bandwidth and insertion loss were measured. The transducer with two matching layers was measured to have a relative bandwidth of 70%, two-way insertion loss 18.4 dB and pulse length 196 ns. The transducers with three matching layers had fractional bandwidths from 90% to 93%, two-way insertion loss ranging from 18.3 to 25.4 dB, and pulse lengths 326 and 446 ns. The long pulse lengths of the transducers with three matching layers were attributed to ripple in the passband.