De novo design, synthesis and spectroscopic characterization of chiral benzimidazole-derived amino acid Zn(II) complexes: Development of tryptophan-derived specific hydrolytic DNA artificial nuclease agent

Novel ternary dizinc(II) complexes 1-3, derived from 1,2-bis(1H-benzimidazol-2-yl)ethane-1,2-diol and l-form of amino acids (viz., tryptophan, leucine and valine) were synthesized and characterized by spectroscopic (IR, (1)H NMR, UV-vis, ESI-MS) and other analytical methods. To evaluate the biological preference of chiral drugs for inherently chiral target DNA, interaction of 1-3 with calf thymus DNA in Tris-HCl buffer was studied by various biophysical techniques which reveal that all these complexes bind to CT DNA non-covalently via electrostatic interaction. The higher K(b) value of L-tryptophan complex 1 suggested greater DNA binding propensity. Further, to evaluate the mode of action at the molecular level, interaction studies of complexes 1 and 2 with nucleotides (5'-GMP and 5'-TMP) were carried out by UV-vis titrations, (1)H and (31)P NMR which implicates the preferential selectivity of these complexes to N3 of thymine rather than N7 of guanine. Furthermore, complex 1 exhibits efficient DNA cleavage with supercoiled pBR322. The complex 1 cleaves DNA efficiently involving hydrolytic cleavage pathway. Such chiral synthetic hydrolytic nucleases with asymmetric centers are gaining considerable attention owing to their importance in biotechnology and drug design, in particular to cleave DNA with sequence selectivity different from that of the natural enzymes.     

Immobilization of tris(1,10-phenanthroline)ruthenium with graphene oxide for electrochemiluminescent analysis

Electrochemiluminescence (ECL) of ruthenium complexes has broad applications and the immobilization of Ru(bpy)₃²⁺ has received extensive attention. In comparison with Ru(bpy)₃²⁺, Ru(phen)₃²⁺ can be immobilized more easily because of its better adsorbability. In this study, immobilization of Ru(phen)₃²⁺ for ECL analysis has been demonstrated for the first time by using graphene oxide (GO) as an immobilization matrix. The immobilization of Ru(phen)₃²⁺ is achieved easily by mixing Ru(phen)₃²⁺ with GO without using any ion exchange polymer or covalent method. The strong binding of Ru(phen)₃²⁺ with GO is attributed to both the π–π stacking interaction and the electrostatic interaction. The Ru(phen)₃²⁺/GO modified electrode was characterized by using tripropylamine (TPA) as the coreactant. The linear range of TPA is from 3 × 10⁻⁷ to 3 × 10⁻² mol L⁻¹ with the detection limit of 3 × 10⁻⁷ mol L⁻¹. The ECL sensor demonstrates outstanding long-term stability. After the storage in the ambient environment for 90 days, the ECL response remains comparable with its original signal.     

Dependence of diffusivity on density and solute diameter in liquid phase: a molecular dynamics study of Lennard-Jones system

Investigations into the variation of self-diffusivity with solute radius, density, and degree of disorder of the host medium is explored. The system consists of a binary mixture of a relatively smaller sized solute, whose size is varied and a larger sized solvent interacting via Lennard-Jones potential. Calculations have been performed at three different reduced densities of 0.7, 0.8, and 0.933. These simulations show that diffusivity exhibits a maximum for some intermediate size of the solute when the solute diameter is varied. The maximum is found at the same size of the solute at all densities which is at variance with the prediction of the levitation effect. In order to understand this anomaly, additional simulations were carried out in which the degree of disorder has been varied while keeping the density constant. The results show that the diffusivity maximum gradually disappears with increase in disorder. Disorder has been characterized by means of the minimal spanning tree. Simulations have also been carried out in which the degree of disorder is constant and only the density is altered. The results from these simulations show that the maximum in diffusivity now shifts to larger distances with decrease in density. This is in agreement with the changes in void and neck distribution with density of the host medium. These results are in excellent agreement with the predictions of the levitation effect. They suggest that the effect of disorder is to shift the maximum in diffusivity towards smaller solute radius while that of the decrease in density is to shift it towards larger solute radius. Thus, in real systems where the degree of disorder is lower at higher density and vice versa, the effect due to density and disorder have opposing influences. These are confirmed by the changes seen in the velocity autocorrelation function, self part of the intermediate scattering function and activation energy.     

Cyclomicrobuxine monohydrate

In the title compound, 3β‐(dimethylamino)‐16α‐hydroxy‐14‐methyl‐4‐methylene‐9,19‐cyclo‐5α‐pregnan‐20‐one monohydrate, C₂₅H₃₉NO₂·H₂O, the pentacyclo steroidal alkaloid is composed of three six‐membered, one five‐membered and one three‐membered ring. The molecular dimensions are as expected. The structure is stabilized by hydrogen bonds involving H and O atoms of water and the alkaloid molecules, with strong N?O [2.829 (7) Å] and O?O [2.790 (6) and 2.949 (7) Å] interactions.     

Crystal structures and biological activity of homologated (N)-n-alkylammonium salts of 2-bromo-3-oxido-1,4-naphthoquinone

Structural Chemistry - Homologated (N)-n-alkylammonium salts of 2-bromo-3-oxido-1,4-naphthoquinone (BS-1 to BS-8) have been synthesized and characterized from the single crystal X-ray diffraction...     

Structure of 3,6-di(p-methoxyphenyl)-2,7-dihydro-1,4,5-thiadiazepine

The title compound C₁₈H₁₈N₂O₂S is monoclinic with unit-cell dimensionsa=8.849(10),b=9.185(11),c=20.257(9) Å,=109.28(10)°. The space group isP2₁/c, withZ=4. Data were measured by photographic methods. The structure was solved by direct methods. A full-matrix least-squares refinement converged toR=0.10. All atoms except sulfur were assigned individual isotropic thermal parameters. The conformation of the thiadiazepine ring system is distorted boat shaped, as indicated by torsion angle studies.     

Simple Organic Salts Having a Naphthalenediimide (NDI) Core Display Multifunctional Properties: Gelation,Anticancer and Semiconducting Properties

Following a supramolecular synthon rationale, a dicarboxylic acid derivative having a naphthalenediimide (NDI) core, namely, bis‐N‐carboxymethyl naphthalenediimide ( NDI‐G ), was reacted with n‐alkyl amines with varying alkyl chain lengths to generate a new series of primary ammonium dicarboxylate (PAD) salts. The majority of the salts (≈85 %) were found to gel various polar solvents. The gels were characterized by dynamic rheology and high‐resolution electron microscopy. Single‐crystal and powder X‐ray diffraction analyses were used to study the supramolecular synthon present in one of the gelator salts (i.e., S8 ). Charge‐transfer (CT)‐induced gelation with donor molecules such as anthracene methanol ( Ant ) and pyrene ( Py ) was also possible with S8 . The CT complex ( S8.Ant ) displayed anticancer activity as probed by cell migration assay on the highly aggresive breast cancer cell line MDA‐MB‐231 . The DMSO gel of S8.Ant also displayed semiconducting behavior. To the best of our knowledge, simple organic salts with an NDI core that display such mulitifunctional properties are hitherto unknown.     

Rheoreversible Metallogels Derived from Coordination Polymers

A series of mixed‐ligand‐based Cd^II/Co^II coordination polymers (CPs) that were derived from two bis(pyridyl)–bis(amide) ligands, 4,4′‐oxybis(N‐(pyridin‐3‐yl)benzamide) ( LP ) and 4,4′‐oxybis(N‐(pyridin‐4‐yl)benzamide) ( LP1 ), and a variety of dicarboxylates isophthalates, terephthalates, 1,2‐carboxytranscinamates, and 1,3‐ and 1,4‐phenylene dicarboxylates were synthesized based on a rationale that they would occlude solvate guests inside their crystal lattice, thereby rendering these CPs suitable as metallogelators. The CPs were characterized by using single‐crystal X‐ray diffraction, elemental analysis, powder X‐ray diffraction (PXRD), FTIR spectroscopy, and thermogravimetric analysis (TGA). Structural analyses revealed that the majority of the CPs were lattice‐occluded molecular solids, which provided us with an opportunity to study their gelation behavior. We observed that, out of eight CPs that were tested, seven were able to produce metallogels. A thorough study of the rheological behavior of the metallogels was performed and CPG1 , CPG2 , CPG4 , and CPG5 were found to exhibit rheoreversible behavior, which was further confirmed by rheological experiments. Interestingly, ligand LP was found to form an aqueous gel, which was exploited to produce silver nanoparticles.     

Determination of isonicotinic acid hydrazide (isoniazid) by the weisz ring-oven technique

A simple precise method is described for the determination of isonicotinic acid hydrazide (isoniazid) alone, and in mixtures with aspirin, paracetamol and streptomycin, by reaction with vanillin in the Weisz ring-oven technique; 0.1–15 μg of isoniazid can be determined with errors of 2–2.7%.     

Evaluation of 1st and 2nd generation of poly(amidoamine) dendrimer functionalized carbon nanotubes for the efficient removal of neptunium

Journal of Radioanalytical and Nuclear Chemistry - Herein, sorption of pentavalent neptunium from aqueous acidic solution was carried out onto 1st and 2nd generation of poly(amidoamine) dendrimer...