Development of an epi-fluorescence assay for monitoring yeast viability and pretreatment hydrolysate toxicity in the presence of lignocellulosic solids

Applied Biochemistry and Biotechnology -     

Atmospheric chemistry of 4:2 fluorotelomer alcohol (n-C4F9CH2CH2OH): products and mechanism of Cl atom initiated oxidation in the presence of NOx

Smog chamber/FTIR techniques were used to study the Cl atom initiated oxidation of 4:2 fluorotelomer alcohol (C(4)F(9)CH(2)CH(2)OH, 4:2 FTOH) in the presence of NO(x) in 700 Torr of N(2)/O(2) diluent at 296 K. Chemical activation effects play an important role in the atmospheric chemistry of the peroxy, and possibly the alkoxy, radicals derived from 4:2 FTOH. Cl atoms react with C(4)F(9)CH(2)CH(2)OH to give C(4)F(9)CH(2)C(*)HOH radicals which add O(2) to give chemically activated alpha-hydroxyperoxy radicals, [C(4)F(9)CH(2)C(OO(*))HOH]*. In 700 Torr of N(2)/O(2) at 296 K, approximately 50% of the [C(4)F(9)CH(2)C(OO(*))HOH]* radicals decompose "promptly" to give HO(2) radicals and C(4)F(9)CH(2)CHO, the remaining [C(4)F(9)CH(2)C(OO(*))HOH]* radicals undergo collisional deactivation to give thermalized peroxy radicals, C(4)F(9)CH(2)C(OO(*))HOH. Decomposition to HO(2) and C(4)F(9)CH(2)CHO is the dominant atmospheric fate of the thermalized peroxy radicals. In the presence of excess NO, the thermalized peroxy radicals react to give C(4)F(9)CH(2)C(O(*))HOH radicals which then decompose at a rate >2.5 x 10(6) s(-1) to give HC(O)OH and the alkyl radical C(4)F(9)CH(2)(*). The primary products of 4:2 FTOH oxidation in the presence of excess NO(x) are C(4)F(9)CH(2)CHO, C(4)F(9)CHO, and HCOOH. Secondary products include C(4)F(9)CH(2)C(O)O(2)NO(2), C(4)F(9)C(O)O(2)NO(2), and COF(2). In contrast to experiments conducted in the absence of NO(x), there was no evidence (<2% yield) for the formation of the perfluorinated acid C(4)F(9)C(O)OH. The results are discussed with regard to the atmospheric chemistry of fluorotelomer alcohols.     

Microwave spectrum and rotational isomers of ethyl fluoroformate

The microwave spectrum of ethyl fluoroformate displays strong a-type R branch transitions from two rotameric forms. One species (extended form) has rotational constants A₀ = 9191.3(9) MHz, B₀ = 2112.61(1) MHz, C₀ = 1756.73(1) MHz which are consistent with a syn-anti (τ₁(OCOC) = 0°, r₂(cocc) = 180°) planar heavy atom structure. The second species (compact form) has rotational constants A₀ = 7760(3) MHz, B₀ = 2388.38(4) MHz, C₀ = 2102.47(3) MHz which are consistent with a syn-gauche (τ₁(ococ) = 0°, τ₂(cocc) ˜ 90°) structure. The two conformational forms have approximately equal energy (0 ± 40 cm⁻¹). Four vibrational satellites of the extended species have been analyzed yielding a torsional frequency around the O-ethyl bond of 70(10) cm⁻¹. Three vibrational satellites attributed to the O-ethyl torsion of the compact species have been analyzed yielding a vibrational frequency of 90(10) cm⁻¹. Approximate Fourier coefficients of a three term potential function for internal rotation about the O-ethyl bond have been determined. Vibrational satellites attributed to the first excited states of the O-ester torsion have been analyzed for both conformers. The torsional vibrational frequency around the O-ester bond is 110(15) cm⁻¹ for the extended conformers and 120(20) cm⁻¹ for the compact.     

Polyphosphates as inorganic polyelectrolytes interacting with oppositely charged ions,polymers and deposited on surfaces: fundamentals and applications

Polyphosphates are important but neglected polyelectrolytes that play a major role in biology and in surface science for the stabilization of colloids against flocculation and for the preservation of food. They are also known as “Calgon” ® and intensively used as additives in washing powders. This review aims to review recent developments in which linear polyphosphates are used for the design of new functional coatings using sol–gel processes and layer-by-layer deposition methods. All these methods rely on the high charge density of polyphosphates as inorganic polyelectrolytes, therefore the structure and properties of these molecules are also reviewed. New perspectives will also been given for the design of stimuli responsive coatings at the tiny frontier between biology and materials science.     

An Alternative Way to Generalize the Pentagon

We introduce the concept of a pentagonal geometry as a generalization of the pentagon and the Desargues configuration, in the same vein that the generalized polygons share the fundamental properties of ordinary polygons. In short, a pentagonal geometry is a regular partial linear space in which for all points x, the points not collinear with the point x, form a line. We compute bounds on their parameters, give some constructions, obtain some nonexistence results for seemingly feasible parameters and suggest a cryptographic application related to identifying codes of partial linear spaces.     

Hypochromism and optical rotation in helical polymers

We show that the decreased light absorption and the anomalous optical rotatory dispersion in helical polynucleotides and polypeptides may be interpreted purely as a local field effect. The electric field of the incident light wave is screened off from each residue by the induced electric dipoles in the others. Quantum-mechanical calculations based on time-dependent Hartree theory and this local field picture correspond precisely with the formulae derived in Tinoco's, Rhodes's, and Moffitt's exciton theories, provided that the Coulomb interactions are small. The degenerate exciton waves in our theory correspond to normal modes of a set of coupled oscillators, and the rotational strengths and oscillator strengths are conserved. There is no conflict between Tinoco's theory of hypochromism and the ones proposed by Bolton and Weiss and by Nesbet. One new conclusion is that the energy shifts accompanying hypochromism should not vary much when the exciton coupling changes from the strong to the weak coupling limits.