The effect of the counterion on water mobility in reverse micelles studied by molecular dynamics simulations

In this study, mobility and structure of water molecules in Aerosol OT (bis(2-ethylhexyl) sulfosuccinate, AOT) reverse micelles with water content w0 = 5 and Na+, K+, Cs+ counterions have been explored with molecular dynamics (MD) simulations. Using the Faeder/Ladanyi model (J. Phys. Chem. B, 2000, 104, 1033) of the reverse micelle interior, MD simulations were performed to calculate the self-intermediate scattering function, FS(Q,t), for water hydrogen atoms that could be measured in a quasielastic neutron scattering experiment. Separate intermediate scattering functions FRS(Q,t) and FCMS(Q,t) were determined for rotational and translational motion. We find that the decay of FCMS(Q,t) is nonexponential and our analysis of the MD data indicates that this behavior arises from decreased water mobility for molecules close to the interface and from confinement-induced restrictions on the range of translational displacements. Rotational relaxation also exhibits nonexponential decay, which is consistent with relatively rapid restricted rotation and slower rotational relaxation over the full angular range. Rotational relaxation is anisotropic, with the O-H bond short-time rotational mobility considerably higher than that of the molecular dipole. This behavior is related to the decreased density of water-water hydrogen bonds in the vicinity of the interface compared to core or bulk water. We find that the interfacial mobility of water molecules is quite different for the three counterion types, but that the core mobility exhibits weak counterion dependence. Differences in interfacial mobility are strongly correlated with structural features, especially ion-water coordination, and the extent of disruption by the counterions of the water hydrogen bond network.     

Spectroscopic studies of water-soluble sulfonated calix[6]arene

Fluorescence and absorption studies of water-soluble sulfonated calix[6]arene (SCX6) are reported. Water-soluble calixarenes are potentially useful as host molecules for luminophores, and studies of their spectroscopic characteristics are therefore crucial. The absorption and fluorescence spectra of these molecules in aqueous solution were collected, analyzed, and compared with 4-hydroxybenzene sulfonate at different pHs. A red shift in the absorption spectrum and a change in the fluorescence spectrum of the calixarenes are observed upon an increase in pH from 2.0 to 13.0. Some of these spectroscopic changes are attributed to intramolecular hydrogen bonding between adjacent hydroxyl groups of SCX6 after proton disassociation. The formation of excimers between phenolic groups in the calixarene molecule is proposed. In addition, inner-filter effects of SCX6 are discussed. These inner-filter effects prove to be a disadvantage for the use of SCX6 as a host molecule for complexation studies by use of fluorescence probes whose absorption spectra overlap with those of calixarenes.     

DNA LESIONS AND DNA DEGRADATION IN MOUSE LYMPHOMA L5178Y CELLS AFTER PHOTODYNAMIC TREATMENT SENSITIZED BY CHLOROALUMINUM PHTHALOCYANINE

Two closely related strains of mouse lymphoma L5178Y cells, LY-R and LY-S, have been found to differ in their sensitivity to the cytotoxic effects of photodynamic treatment (PDT) with chloroaluminum phthalocyanine (CAPC) and red light. Strain LY-R is more sensitive to photodynamic cell killing than strain LY-S. Differences in uptake of CAPC could not account for the differences in cytotoxic effects. There was no marked difference between the two strains in the induction of single-strand breaks (which includes frank single-strand breaks and alkali-labile lesions), but substantially more DNA-protein cross-links were formed in strain LY-R by CAPC and light. Repair of single-strand breaks proceeded with similar kinetics in both strains for the first 30 min post-irradiation, suggesting that these lesions are not responsible for the differential sensitivity of the two strains to the lethal effects of photodynamic treatment. Thereafter, alkaline elution revealed the presence of increasing DNA strand breakage in strain LY-R. DNA degradation, as measured by the conversion of prelabeled [14C] DNA to acid-soluble radioactivity, was more rapid and extensive in strain LY-R.     

Solubility of (UO2)3(PO4)2?4H2O in H+-Na+-OH?-H2PO?4-HPO2?4-PO3?4-H2O and Its Comparison to the Analogous PuO2 +2 System

The objectives of this study were to address uncertainties in the solubility product of (UO₂)₃(PO₄)₂⋅4H₂O(c) and in the phosphate complexes of U(VI), and more importantly to develop needed thermodynamic data for the Pu(VI)-phosphate system in order to ascertain the extent to which U(VI) and Pu(VI) behave in an analogous fashion. Thus studies were conducted on (UO₂)₃(PO₄)₂⋅4H₂O(c) and (PuO₂)₃(PO₄)₂⋅4H₂O(am) solubilities for long-equilibration periods (up to 870 days) in a wide range of pH values (2.5 to 10.5) at fixed phosphate concentrations of 0.001 and 0.01 M, and in a range of phosphate concentrations (0.0001–1.0 M) at fixed pH values of about 3.5. A combination of techniques (XRD, DTA/TG, XAS, and thermodynamic analyses) was used to characterize the reaction products. The U(VI)-phosphate data for the most part agree closely with thermodynamic data presented in Guillaumont et al.,⁽¹⁾ although we cannot verify the existence of several U(VI) hydrolyses and phosphate species and we find the reported value for formation constant of UO₂PO⁻₄ is in error by more than two orders of magnitude. A comprehensive thermodynamic model for (PuO₂)₃(PO₄)₂⋅4H₂O(am) solubility in the H⁺-Na⁺-OH⁻-Cl⁻-H₂PO⁻₄-HPO²⁻₄-PO³⁻₄-H₂O system, previously unavailable, is presented and the data shows that the U(VI)-phosphate system is an excellent analog for the Pu(VI)-phosphate system.     

Synthesis and anticholinesterase activity of some new fluorogenic analogues of organophosphorus nerve agents

Eighteen new fluorogenic analogues of organophosphorus nerve agents were synthesised and characterised. They included analogues of tabun, sarin, cyclosarin, soman, VX, and Russian VX, with the 7-oxy-4-methylcoumarin or 7-oxy-4-(trifluoromethyl)coumarin leaving group. These analogues inhibited acetylcholinesterase (AChE) effectively in vitro and therefore have potential as tools for the identification of novel organophosphatases in biological systems. Analogues of VX and Russian VX with the 7-amino-4-methylcoumarin group, although poor AChE inhibitors, may have utility for screening enzyme libraries for phosphoramidases capable of cleaving P-N bonds.     

Laser-induced breakdown spectroscopy analysis of minerals: Carbonates and silicates

Laser-induced breakdown spectroscopy (LIBS) provides an alternative chemical analytical technique that obviates the issues of sample preparation and sample destruction common to most laboratory-based analytical methods. This contribution explores the capability of LIBS analysis to identify carbonate and silicate minerals rapidly and accurately. Fifty-two mineral samples (18 carbonates, 9 pyroxenes and pyroxenoids, 6 amphiboles, 8 phyllosilicates, and 11 feldspars) were analyzed by LIBS. Two composite broadband spectra (averages of 10 shots each) were calculated for each sample to produce two databases each containing the composite LIBS spectra for the same 52 mineral samples. By using correlation coefficients resulting from the regression of the intensities of pairs of LIBS spectra, all 52 minerals were correctly identified in the database. If the LIBS spectra of each sample were compared to a database containing the other 51 minerals, 65% were identified as a mineral of similar composition from the same mineral family. The remaining minerals were misidentified for two reasons: 1) the mineral had high concentrations of an element not present in the database; and 2) the mineral was identified as a mineral with similar elemental composition from a different family. For instance, the Ca–Mg carbonate dolomite was misidentified as the Ca–Mg silicate diopside. This pilot study suggests that LIBS has promise in mineral identification and in situ analysis of minerals that record geological processes.     

Fermentation of “Quick Fiber” produced from a modified corn-milling process into ethanol and recovery of corn fiber oil

Approximately 9% of the 9.7 billion bushels of corn harvested in the United States was used for fuel ethanol production in 2002, half of which was prepared for fermentation by dry grinding. The University of Illinois has developed a modified dry grind process that allows recovery of the fiber fractions prior to fermentation. We report here on conversion of this fiber (Quick Fiber [QF]) to ethanol. QF was analyzed and found to contain 32%wt glucans and 65%wt total carbohydrates. QF was pretreated with dilute acid and converted into ethanol using either ethanologenic Escherichia coli strain FBR5 or Saccharomyces cerevisiae. For the bacterial fermentation the liquid fraction was fermented, and for the yeast fermentation both liquid and solids were fermented. For the bacterial fermentation, the final ethanol concentration was 30 g/L, a yield of 0.44 g ethanol/g of sugar(s) initially present in the hydrolysate, which is 85% of the theoretical yield. The ethanol yield with yeast was 0.096 gal/bu of processed corn assuming a QF yield of 3.04 lb/bu. The residuals from the fermentations were also evaluated as a source of corn fiber oil, which has value as a nutraceutical. Corn fiber oil yields were 8.28%wt for solids recovered following prtetreatment.     

INDUCTION OF DNA-PROTEIN CROSS-LINKS IN CHINESE HAMSTER CELLS BY THE PHOTODYNAMIC ACTION OF CHLOROALUMINUM PHTHALOCYANINE AND VISIBLE LIGHT

Abstract— Chloroaluminum phthalocyanine (CAPC) is an efficient photosensitizer for the inactivation of Chinese hamster V79 cells. In order to investigate possible molecular mechanisms in the photo-dynamic action of CAPC and visible light, the induction and repair rate of two classes of DNA lesions have been determined, i.e. DNA single-strand breaks and DNA-protein cross-links. In cells pretreated with 1 μ.M CAPC, a fluence of 12 kJ/m² of red light (>600 nm) kills approximately 50% of the cells and induces 3 to 3.5 Gy-equivalents of single-strand breaks. The repair of these breaks was slower than the repair of single-strand breaks induced by -irradiation. The photodynamic action of CAPC also induces a large number of DNA-protein cross-links which, in contrast to -radiation-induced DNA-protein cross-links, do not appear to be repaired during 4 h of post-treatment incubation in fresh medium. These studies suggest that DNA may be an important target for the cytotoxicity of CAPC + red light.     

[M(bpy)3] (M = Fe,Ru, Os): New Crystalline Materials from the reductive electrocrystallization of [M(bpy)3](PF6)2

Reductive electrocrystallization at a constant current density (11.0–11.5 μA/cm²) of millimolar solutions of [M(bpy)₃](PF₆)₂, where M = Fe, Ru, or Os, and bpy = 2,2′-bipyridine in acetonitrile containing 0.1M Bu₄NPF₆ results in the formation of dark crystals on the Pt cathode. The crystals grow as long, thin, and shiny needles having a hexagonal cross section of 0.1–0.5 mm in diameter. Combustion microanalyses results are consistent with the composition for [Fe(bpy)₃], [Ru(bpy)₃], and [Os(bpy)₃]. In addition, the chromophores are conserved, as confirmed by recording both the electronic and the ¹H-NMR spectra after reoxidation of the electrocrystals in humid air. The spectra are identical to those for authentic samples of [Fe(bpy)₃]²⁺, [Ru(bpy)₃]²⁺, and [Os(bpy)₃]²⁺. A ratio of 2.0 ± 0.1 e^?/molecule is observed upon completion of the controlled potential electrolysis of a solution of [M(bpy)₃]²⁺, which results in the precipitation of a dark solid and the almost complete fading of the color of the original solution. Unexpectedly, the crystals do not exhibit an ESR signal. These data indicate the formation of novel materials, crystalline [Fe(bpy)₃], [Ru(bpy)₃], and [Os(bpy)₃].     

Development of an epi-fluorescence assay for monitoring yeast viability and pretreatment hydrolysate toxicity in the presence of lignocellulosic solids

Applied Biochemistry and Biotechnology -