Carrageenan as an elicitor of induced secondary metabolites and its effects on various growth characters of chickpea and maize plants

The effects of polysaccharide elicitor k-carrageenan obtained from Hypnea musciformis, red algae on the production of Induced Secondary Metabolites, ISMs (the disease resistance compounds) and on various growth characters of chickpea and maize plants were studied. Experiments were conducted in the field of PCSIR Laboratories Complex Karachi during December 2008–April 2009 in randomized complete block design with three replications. Three elicitor treatments were used, a solid preparation in which the elicitor was mixed with soil (T₂ 1 mg/g) and applied around the seeds in the soil. The two other preparations were liquid, T₁ and T₃ at a concentration of 100 μg glc eq ml⁻¹ and were applied around the sowing seeds and as a foliar spray on the plants, respectively. Statistical analysis of the data revealed that these treatments significantly enhanced all the growth characters of chickpea except T₂ that gave the nonsignificant difference in the plant height. Maximum plant height (80.3 cm), number of pods plant⁻¹ (76.2), number of branches plant⁻¹ (25.0), number of leaves plant⁻¹ (125.6), earlier flowering and high ISMs contents in leaves, stem and grains of chickpea were recorded in T₁ treated chickpea plants. In maize plants only T₁ and T₃ treatments (with minor exceptions) had significant effects on few characters like plant height, stem diameter, number of leaves plant⁻¹ and on ISMs contents in leaves while number of cobs plant⁻¹ and flowering time were nonsignificantly affected by these treatments. These results suggested that k-carrageenan elicitor can be used as a potent plant protectant as well as growth promoting agent especially for chickpea plants.     

Extreme red shifted SERS nanotags

Surfaced enhanced Raman scattering (SERS) nanotags operating with 1280 nm excitation were constructed from reporter molecules selected from a library of 14 chalcogenopyrylium dyes containing phenyl, 2-thienyl, and 2-selenophenyl substituents and a surface of hollow gold nanoshells (HGNs). These 1280 SERS nanotags are unique as they have multiple chalcogen atoms available which allow them to adsorb strongly onto the gold surface of the HGN thus producing exceptional SERS signals at this long excitation wavelength. Picomolar limits of detection (LOD) were observed and individual reporters of the library were identified by principal component analysis and classified according to their unique structure and SERS spectra.     

Synthesis,Spectroscopy, Semi‐empirical and Biological Activities of Organotin(IV) Complexes with o‐Isopropyl Carbonodithioic Acid

New organotin(IV) complexes have been synthesized by treating potassium o‐isopropyl carbonodithioate with R₂SnCl₂/R₃SnCl in 1 : 2/1 : 1 M/L ratio. All complexes have been characterized by IR and NMR (¹H, ¹³C) spectroscopy. IR results shows that ligand acts as bidentate which is also confirmed by semi‐empirical study. NMR data reveals four coordinated geometry in solution. Computed positive heat of formation shows that complex 5 is thermodynamically unstable. UV/visible spectroscopy was used to assess the mode of interaction and binding of the complexes with DNA which shows that complex 5 exhibits higher binding constant as compared to complex 3 . In protein kinase inhibition assay, compound 3 was found most active, while other biological activities shows that triorganotin(IV) complexes are biologically more active as compared to diorganotin(IV) complexes.     

The Use of Poly(Vinyl Alcohol) to Cross‐link Penicillinase for the Fabrication of a Penicillin Potentiometric Biosensor

Chemically cross‐linked PVA films are permeable matrices for the fabrication of biosensors. PVA provides an attractive immobilisation method as it preserves the enzymatic activity. Penicillinase (P’nase) was cross‐linked with poly(vinyl alcohol) (PVA) and bovine serum albumin (BSA). The optimum conditions for the of BSA‐PVA‐P’nase film were: 2.5 % w/v PVA, 0.006 % w/v BSA, 2.4 mM penicillin (Pen) and 16 U/mL P’nase. The minimum detectable concentration was 1.7 µM. The linear concentration range obtained for the BSA‐PVA film was 7.5–283 µM. The BSA‐PVA P’nase biosensor detected penicillin in amoxycillin with an average percentage recovery of 97±12 %. Higher penicillin concentrations (10–20 ppm) were detected more successfully than lower concentrations (≤5 ppm). These results indicate that further work is required to enable the successful detection of lower penicillin concentrations such as 5 ppm.     

Studies and X‐ray Determinations with 2‐(Acetonylthio)benzothiazole: Synthesis of 2‐(Benzothiazol‐2‐ylthio)‐1‐phenylethanone and 2‐(Acetonylthio)Benzothiazole by C―S Bond Cleavage of 2‐(Acetonylthio)benzothiazole in KOH

New route for the synthesis of 2‐(benzothiazol‐2‐ylthio)‐1‐phenylethanone ( 6 ) and 2‐(acetonylthio)benzothiazole ( 1 ) by using phenacyl bromide and α‐chloroacetone, respectively, through carbon–sulfur bond cleavage reactions in a basic medium has been generated. Treatment of 1 with malononitrile and elemental sulfur afforded the corresponding derivative of 2‐amino‐3‐cyanothiophene ( 12 ), whereas treatment of 1 with cyanoacetohydrazide afforded the corresponding derivative of cyanoacetylhydrazone derivative ( 13 ). The structure of the synthesis compounds has been established on the basis of elemental analyses, ¹H‐NMR, ¹³C‐NMR, correlation spectroscopy, heteronuclear single quantum coherence, MS spectra, and X‐ray crystallographic investigations.     

Preparation of activated carbon from date pits: Effect of the activation agent and liquid phase oxidation

Two series of activated carbons have been prepared from date pits; series C, using carbon dioxide as activating agent, and series S, prepared by activation with steam under the same experimental conditions. The obtained samples were oxidized with nitric acid in order to introduce more oxygen surface groups. The surface area and porosity of the parent and oxidized activated carbons were studied by N₂ adsorption at 77 K and CO₂ adsorption at 273 K. The oxygen surface complexes were characterized by temperature-programmed decomposition (TPD). The results show that carbon dioxide and steam activations produce microporous carbons with an increasing amount of CO evolving groups when increasing the burn-off. On the other hand, oxidation with nitric acid increases the amount of CO and CO₂ evolved by the decomposition of surface oxygen groups, this increase being related to the development of porosity in the carbon with the degree of activation and to the activating agent used (CO₂ versus steam).     

Hydrogen adsorption in an interpenetrated dynamic metal-organic framework

A metal-organic framework Zn(NDC)(4,4'-Bpe)(0.5).xG [NDC = 2,6-naphthalenedicarboxylate; 4,4'-Bpe = 4,4'-trans-bis(4-pyridyl)ethylene; G = guest molecules] has been synthesized, structurally characterized, and rationalized to be a two-interpenetrated elongated primitive cubic net. Powder X-ray diffraction and adsorption studies reveal the dynamic feature of the framework, which can take up hydrogen of about 2.0 wt % at 77 K and 40 bar and 0.3 wt % at 298 K and 65 bar.     

Experimental/theoretical electrostatic properties of a styrylquinoline-type HIV-1 integrase inhibitor and its progenitors

We have established that polyhydroxylated styrylquinolines are potent inhibitors of HIV-1 integrase (IN). Among them, we have identified (E)-8-hydroxy-2-[2-(4,5-dihydroxy-3-methoxyphenyl)-ethenyl]-7-quinolinecarboxylic acid (1) as a promising lead. Previous molecular dynamics simulations and docking procedures have shown that the inhibitory activity involves one or two metal cations (Mg2+), which are present in the vicinity of the active center of the enzyme. However, such methods are generally based on a force-field approach and still remain not as reliable as ab initio calculations with extended basis sets on the whole system. To go further in this area, the aim of the present study was to evaluate the predictive ability of the electron density and electrostatic properties in the structure-activity relationships of this class of HIV-1 antiviral drugs. The electron properties of the two chemical progenitors of 1 were derived from both high-resolution X-ray diffraction experiments and ab initio calculations. The twinning phenomenon and solvent disorder were observed during the crystal structure determination of 1. Molecule 1 exhibits a planar s-trans conformation, and a zwitterionic form in the crystalline state is obtained. This geometry was used for ab initio calculations, which were performed to characterize the electronic properties of 1. The electron densities, electrostatic potentials, and atomic charges of 1 and its progenitors are here compared and analyzed. The experimental and theoretical deformation density bond peaks are very comparable for the two progenitors. However, the experimental electrostatic potential is strongly affected by the crystal field and cannot straightforwardly be used as a predictive index. The weak difference in the theoretical electron densities between 1 and its progenitors reveals that each component of 1 conserves its intrinsic properties, an assumption reinforced by a 13C NMR study. This is also shown through an excellent correlation of the atomic charges for the common fragments. The electrostatic potential minima in zwitterionic and nonzwitterionic forms of 1 are discussed in relation with the localization of possible metal chelation sites.     

High-dimensional mixed-valence copper cyanide complexes: Syntheses,structural characterizations and magnetism

Reactions of CuCl₂ with different CN complexes in presence of a neutral ancillary ligand lead to two novel mixed-valence Cu complexes [Cu^II(bpy)Cu^I(CN)₃]_n, 1 (bpy = 2,2′-bipyridine) and {[Cu^II(tn)₂][Cu^I₄(CN)₆]}_n2 (tn = 1,3-diaminopropane). For compound 1, the asymmetric unit involves two Cu ions Cu1 and Cu2 (Cu^I and Cu^II centres, respectively) which strongly differ in their environments. The Cu1 ion presents a CuC₄ pseudo-tetrahedral geometry, while the Cu2 ion presents a CuN₅ slightly distorted square-pyramidal geometry. The extended structure of 1 is generated by three cyano ligands which differ in their coordination modes. One CN group has a μ₃ coordination mode and bridges two Cu^I and one Cu^II ion, while the two other CN groups act as μ₂ bridges leading to a sophisticated 3-D structure. As for 1, the asymmetric unit of 2 involves three crystallographically different Cu ions (Cu1A and Cu1B, presumably Cu^I centres, and Cu2 presumably Cu^II centres). The Cu2 ion presents centrosymmetric CuN₄ coordination environments involving four nitrogen atoms from two bidentate tn ligands; while the Cu1A and Cu1B ions are three coordinated to cyano groups. The structure can be described as formed by 18-membered “[Cu^I(CN)]₆” planar metallocycles that are connected to their six neighbors to generate 2-D sheets; these sheets stack forming infinite hexagonal channels in which the [Cu(tn)₂]²⁺ units are located. Magnetic measurements show an unexpected weak ferromagnetic coupling (θ = 0.239(1) K) of the Cu^II ions through the long and “a priori diamagnetic” –NC–Cu^I–CN– bridges in compound 1 and an essentially paramagnetic behavior in compound 2.