A new application of sequence Fourier analysis to specific ligand-protein interactions

A frequency (or sequence)-dependent rule seems to be conserved in a simple and concerted interaction of various human proteins.     

A Novel Mechanism of Preferential Enrichment Phenomenon Observed for the Cocrystal of (RS)-2-{4-[(4-Chlorophenoxy)methyl]phenoxy}propionic Acid and Isonicotinamide

A new entry of chiral anti-hyperlipoproteinemia drug is reported, showing an excellent preferential enrichment (PE) phenomenon which is not caused by a polymorphic transition during crystallization, but is proposed to occur by a novel mechanism involving partially irregular stacking of R and S homochiral two-dimensional (2D) sheets with a large dipole moment, followed by selective redissolution of one homochiral 2D sheet into the mother liquor during crystallization. The cocrystal composed of (RS)-2-{4-[(4-chlorophenoxy)methyl]phenoxy}propionic acid (CPPPA) and achiral isonicotinamide exhibited a substantial enrichment in the mother liquor up to 93 % ee by simply repeating recrystallization under nonequilibrium conditions using high supersaturation. Furthermore, the deposited crystals with low ee values obtained at the end of PE experiment were second harmonic generation (SHG)-positive, indicating the formation of homochiral domains in the deposited crystals, which reflects the proposed mechanism of PE.     

A near infrared spectroscopic discrimination of noodle flours using a principal-component analysis coupled with chemical information.

Using a portable near infrared (NIR) spectrometer, we discriminated flours for making Japanese noodles (Soba), not only relying on a statistical and mathematical approach, but also on a chemical interpretation of the NIR spectra. In original NIR spectra, the particle-size difference, which results in an undesired systematic variation, was extracted and interpreted as the first-principal component factor by a principal-component analysis. The discrimination of flour materials cannot be satisfied by this factor. However, after a standardized treatment for the original spectra, the particle-size effects were eliminated; alternatively, differences in the chemical contents were extracted as principal-component factors. Using these factors, flour material discrimination was achieved much better. This study suggests a novel idea of utilizing the wavelength contribution ratio spectra for interpreting the factors extracted from the principal-component analysis for the NIR spectra. This report also describes the relationship between the NIR spectra and the chemical-analysis data.     

Photochemical synthesis of 1,2,3,4-tetrahydroisoquinolin-3-ones from N-chloroacetylbenzylamines

When N-chloroacetyl-3-hydroxybenzylamine (37) in aqueous acetonitrile was irradiated, both ortho and para photocyclizations with reference to the OH group occurred to give 7- and 5-hydroxy-3-oxo-1,2,3,4-tetrahydroisoquinolines (52,53). Similarly, 1-methylisoquinoline derivatives (54,55) were synthesized. N-Chloroacetyl-3,5-dihydroxybenzylamine (39) gave a single photoproduct, 5,7-dihydroxy-3-oxo-1,2,3,4-tetrahydroisoquinoline (56). These photocyclizations were smoothly extended to the synthesis of 1-benzyl, 1-(4′-methoxybenzyl)- and 1-(3′,4′,5′-trimethoxybenzyl)-isoquinoline derivatives (58～64).     

A mechanistic study of the photoreaction of dimethylaniline and methyl chloroacetate: Role of acid-base properties in both the ground state and the excited state

On irradiation, dimethylaniline 1 reacted with methyl chloroacetate 2 in both acidic and basic solutions to yield methyl o- and p-dimethylaminophenylacetates (3a,3b). Kinetic treatments on the basis of quantum yields for fluorescence quenching and disappearance of 1 revealed the mechanism, which involves the exciplex in a broad sense under acidic conditions and both the exciplex and the charge-transfer complex under basic conditions.     

Nanometer‐sized polyradical particles: Organic magnetic dot array formed on a silicon microfabricated substrate

A magnetically active, purely organic dot array was formed by the selective deposition of polyradical nanoparticles on array‐like‐formed pits on a silicon substrate. The nanometer‐sized polyradical particles, poly(4‐methacryoyloxy‐2,2,6,6‐tetramethylpiperidine‐1‐oxyl), were prepared by the emulsion polymerization of 4‐methacryloyloxy‐2,2,6,6‐tetramethylpiperidine‐1‐acetoxyl followed by a deprotection reaction and oxidation in air. The size (diameter) and radical spin concentration of the polyradical nanoparticles were tunable between the polymerization and oxidation conditions. Electrochemical studies revealed the redox property of the polyradical nanoparticles. The magnetic response image of the polyradical nanoparticles was obtained by magnetic force microscopy, reflecting their radical spin concentrations. These results suggested a possible approach for the use of organic polyradical nanoparticles as organic magnetic dot arrays. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 521–530, 2007