Click‐Tag and Amine‐Tag: Chemical Tag Approaches for Efficient Protein Labeling In Vitro and on Live Cells using the Naturally Split Npu DnaE Intein

Protein labeling with synthetic moieties remains in many cases a technically challenging or unresolved task. Two new and simple concepts are presented. In both approaches, a very short tag of only a few amino acids is prepared with the desired chemical modification and, in a second step, it is transferred to the protein of interest by protein trans‐splicing. For the amine‐tag, a recombinant intein fragment free of lysine residues was generated such that the amine group of the N terminus could be selectively modified with regular amine‐reactive reagents. Thus, standard bioconjugation procedures without any chemical synthesis could be applied without modification of lysines in the protein of interest. For the click‐tag, protein trans‐splicing was combined with unnatural amino acid mutagenesis and subsequent bioorthogonal side chain modification, as demonstrated for click chemistry using p‐azidophenylalanine. By the two‐step strategy, exposure of the protein of interest to the copper catalyst was avoided.     

Crosslinking‐induced morphology change of latex nanoparticles: A study of RAFT‐mediated polymerization in aqueous dispersed media using amphiphilic double‐brush copolymers as reactive surfactants

Amphiphilic double‐brush copolymers (DBCs) with each graft site quantitatively carrying both a hydrophilic poly(ethylene oxide) (PEO) graft and a hydrophobic polystyrene (PSt) graft are synthesized by sequential reversible addition‐fragmentation chain transfer (RAFT) polymerization and ring‐opening metathesis polymerization (ROMP). These DBCs are used as both surfactants and polyfunctional RAFT agents in the radical polymerization of St in aqueous dispersed media. Miniemulsions with narrowly dispersed St‐based nanodroplets are readily obtained after ultrasonication of the reaction mixtures. Without the presence of crosslinker, chain‐extension polymerization of St from the DBCs yields well‐defined polymeric latexes with narrow size distributions. However, with the presence of divinylbenzene (DVB) as the crosslinker, vesicular polymeric nanoparticles are formed as the major product. Such crosslinking‐induced change in morphology of the resulting latex nanomaterials may be ascribed to the increase of interfacial curvature in the heterophase systems during crosslinking polymerization. © 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2014 , 52, 3250–3259     

Trapping Nanostructures on Surfaces through Weak Interactions

The assembly of imidazole‐functionalized phenanthroline‐strapped zinc porphyrins (ZnPorphen) with alkyl or polyethylene glycol (PEG) side chains was studied in solution and by AFM after casting on highly oriented pyrolytic graphite (HOPG) or mica. The nature of the solvent and its evaporation time influenced the morphology of the objects observed. On HOPG, short rods of about 100 nm were observed after fast evaporation of solutions of the alkyl derivatives in CHCl₃, THF, or pyridine, whereas islands of aligned rows of longer wires were obtained from methylcyclohexane (MCH). Slow evaporation of MCH led to a three‐dimensional assembly. The PEG porphyrin assembled into short wires on HOPG or fibers on mica after slow evaporation of solutions in THF. This study shows the role of surface–molecule interactions in the interfacial assembly of ZnPorphen derivatives and contributes to understanding the parameters that control their noncovalent assembly into molecular wires on a surface.     

Total Synthesis of Albicidin: A Lead Structure from Xanthomonas albilineans for Potent Antibacterial Gyrase Inhibitors

The peptide antibiotic albicidin, which is synthesized by the plant pathogenic bacterium Xanthomonas albilineans, displays remarkable antibacterial activity against various Gram‐positive and Gram‐negative microorganisms. The low amounts of albicidin obtainable from the producing organism or through heterologous expression are limiting factors in providing sufficient material for bioactivity profiling and structure–activity studies. Therefore, we developed a convergent total synthesis route toward albicidin. The unexpectedly difficult formation of amide bonds between the aromatic amino acids was achieved through a triphosgene‐mediated coupling strategy. The herein presented synthesis of albicidin confirms the previously determined chemical structure and underlines the extraordinary antibacterial activity of this compound. The synthetic protocol will provide multigram amounts of albicidin for further profiling of its drug properties.     

A new linear method for analyzing four‐way multiblock tables: STATIS‐4

A new four‐way multiblock method is proposed to study the links between more than two sets of data tables (several multiblocks) measured on the same observations. This method, called STATIS‐4, generalizes the STATIS method to more than one set of matrices. In its first step, STATIS‐4 is searching for one consensus for each multiblock and a global consensus summarizing all the previous ones as good as possible. Some graphical representations can be made to visualize the proximities between the tables within a multiblock and to visualize those between all the multiblocks. Moreover, plots of the observations for each table, each multiblock and global observations can be made. The theory of STATIS‐4 and the algorithm used to obtain the optimal solutions are presented. Moreover, a real sensory dataset is studied with STATIS‐4. Copyright © 2008 John Wiley & Sons, Ltd.     

Increasing Complexity: A Practical Synthetic Approach to Three-Dimensional,Cyclic Sulfoximines and First Insights into Their in Vitro Properties

A short synthetic approach with broad scope to access five- to seven-membered cyclic sulfoximines in only two to three steps from readily available thiophenols is reported. Thus, simple building blocks were converted to complex molecular structures by a sequence of S-alkylation and one-pot sulfoximine formation, followed by intramolecular cyclization. Seventeen structurally diverse cyclic sulfoximines were prepared in high overall yields. In vitro evaluation of these underrepresented, three-dimensional, cyclic sulfoximines with respect to properties relevant to medicinal chemistry did not reveal any intrinsic flaw for application in drug discovery.     

Stress-Induced Domain Wall Motion in a Ferroelastic Mn3+ Spin Crossover Complex

Domain wall motion is detected for the first time during the transition to a ferroelastic and spin state ordered phase of a spin crossover complex. Single-crystal X-ray diffraction and resonant ultrasound spectroscopy (RUS) revealed two distinct symmetry-breaking phase transitions in the mononuclear Mn³⁺ compound [Mn(3,5-diBr-sal₂(323))]BPh₄, 1. The first at 250 K, involves the space group change Cc→Pc and is thermodynamically continuous, while the second, Pc→P1 at 85 K, is discontinuous and related to spin crossover and spin state ordering. Stress-induced domain wall mobility was interpreted on the basis of a steep increase in acoustic loss immediately below the the Pc-P1 transition     

EPR and optical studies of erbium-doped beta-PbF2 single-crystals and nanocrystals in transparent glass-ceramics

beta-PbF(2) single-crystals and nanocrystals in transparent glass-ceramics doped with ErF(3) have been synthesized and studied with two complementary techniques: electron paramagnetic resonance (EPR) and optical spectroscopy (absorption, selective excitation, fluorescence). A comparative study shows that, in both single-crystals and glass-ceramics, Er(3+) ions occupy the same types of sites, leading to similar optical properties. An EPR investigation demonstrates that, in these materials, part of the Er(3+) ions occupy cubic symmetry sites. For these ions, we determine the crystal field splitting of the ground state (4)I(15/2) and the symmetry of its sublevels. We also provide evidence for the presence of another type of Er(3+) ions, not detectable by EPR but evidenced by optical spectroscopy. We clearly show that this Er(3+), which gives rise to up-conversion luminescence, corresponds to clusters associating Er(3+) and F(-) ions. In the single-crystals, the proportion of these two types of erbium ions is estimated. It strongly depends on the doping rate of the beta-PbF(2) crystals.     

Ba2[Ni3N2]: a low-valent nitridonickelate-synthesis, crystal structure, and physical properties

The ternary alkaline-earth nitridonickelate Ba2[Ni3N2] (Ba2[NiI2Ni0N2]) was prepared by the reaction of mixtures of Ba2N and Ni in nitrogen gas of ambient back-pressure at 1173 K. The crystal structure determined by X-ray single-crystal and powder diffraction methods as well as from neutron diffraction data at various temperatures between 2 and 298 K is orthorhombic (Cmca (no. 64), 298 K: a=715.27(18) pm, b=1032.99(21) pm, c=740.12(20) pm) and provides the first example of a nitridonickelate with a two-dimensional complex anion. The Ni2 atom is described with a split position and the corresponding superstructure variants are investigated by theoretical full-potential nonorthogonal local-orbital calculations (FPLO). The average oxidation state of Ni in Ba2[Ni3N2] is +0.67, the lowest average value observed in nitridonickelates so far. Investigations of the physical properties demonstrate that Ba2[Ni3N2] acts as a "poor" metal with a large resistivity of approximately 2.7 mOmega cm at 300 K and exhibits low-dimensional magnetism with antiferromagnetic ordering at T approximately 90 K. XAS spectra correspond with low-valent Ni states.