Expanding quark-gluon plasmas

The expansion and chemical equilibration of a quark-gluon plasma formed in collisions of two heavy nuclei may be described by relativistic fluid dynamics, in combination with chemical rate equations for the different parton species. Using initial conditions obtained from a self-screened parton cascade calculation and allowing for the full three-dimensional expansion of the parton plasma, we make predictions about the life-time of the quark-gluon plasma and the transverse flow velocity at hadronization for Au + Au collisions at RHIC and LHC energy.     

Hydrogen ion-selective poly(vinyl chloride) membrane electrode based on a calix[4]arene.

A hydrogen ion-selective poly(vinyl chloride) membrane electrode was constructed using 5,11,17,23-tetra-tert-butyl-25,26,27,28-tetracyanomethoxycalix[4]arene as a neutral carrier. The electrode showed an apparent Nernstian response in the 2-11.5 pH range with a slope of 54.0 +/- 0.2 mV/pH at 20 +/- degrees C. This electrode showed a rapid response of the emf to changes in the pH, high ion selectivity with respect to lithium, sodium and potassium, and characteristics similar to those reported for the conventional pH glass membrane electrode. It can be used as a potentiometric indicator electrode in hydrofluoric acid solutions. The effects of iodide, thiocyanate, perchlorate and bromide on the characteristics of the electrode were also considered.     

Oligomeric calix[4]arene‐thiacrown ether for toxic heavy metals

A new oligomeric calix[4]arene‐thiacrown‐4 ( 5 ) was synthesized via a condensation reaction of 5,11,17,23‐tetra‐tert‐butyl‐25,27‐bis‐(4‐aminobenzyloxy)‐calix[4]arene‐thiacrown‐4 ( 4 ) with adipoyl dichloride. In this oligomerization reaction only five/six calix[4]arene‐thiacrown‐4 units were linked in the oligomeric chain. The complexation studies of 5 were made with liquid–liquid‐ extraction and solid–liquid‐sorption procedures. For comparison, the extraction efficiencies of monomers 1 , 3 , and 4 to selected transition metals are reported. The selectivity of monomers 3 and 4 toward Cu²⁺, Hg²⁺, and Pb²⁺ was lost after oligomerization in the two‐phase extraction systems. © 2003 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 186–193, 2004     

Permanganate-impregnated packed capillary columns for group separation of triacylglycerols using supercritical media as mobile phases

Capillary columns packed with a silica-based anion exchanger were treated in situ with a solution of potassium permanganate. These columns showed highly reproducible retention times when used under supercritical conditions. Column temperatures up to 140°C could be applied. This type of column was successfully used for the group separation of triacylglycerols from vegetable oils according to their degree of unsaturation.     

A direct search method for determination of DAEM kinetic parameters from nonisothermal TGA data (note)

In this study, a simple direct search method to be used for the determination of distributed activation energy model (DAEM) kinetic parameters from the nonisothermal thermogravimetric analysis (TGA) data of coals has been introduced. Process steps of direct search method that depends on the grid technique have been given. The method has been applied to the nonisothermal TGA data of one Turkish coal and one imported coal, and DAEM kinetic parameters of these coal samples have been determined. Calculated model results from determined kinetic parameters have been compared with nonisothermal TGA data of the coals.     

Photophysical, photochemical and BSA binding/BQ quenching properties of quaternizable coumarin containing water soluble zinc phthalocyanine complexes

The non-peripherally (np-QZnPc) and peripherally (p-QZnPc) tetrakis-[7-oxo-(3-[(2-diethylaminomethyliodide)ethyl)]-4-methylcoumarin]-phthalocyaninatozinc complexes have been prepared by quaternization of non-peripherally and peripherally tetrakis[7-oxo-(3-[(2-diethylamino)ethyl)]-methylcoumarin] phthalocyaninato zinc complexes with methyliodide in dimethylsulfoxide (DMSO). The new quaternized zinc phthalocyanine complex (np-QZnPc) has been characterized by elemental analysis, MALDI-TOF, IR and UV-vis spectral data. The photophysical and photochemical properties of the peripherally and non-peripherally quaternized tetrakis-3-[(2-diethylamino)ethyl]-7-oxo-4-methylcoumarin substituted zinc phthalocyanines are reported. The effects of the position of the substituents and the aggregation of the phthalocyanine molecules on the photophysical and photochemical properties are also investigated. General trends are described for photodegradation, singlet oxygen and fluorescence quantum yields, and fluorescence lifetimes for complexes np-ZnPc/p-ZnPc in DMSO and for complexes np-QZnPc/p-QZnPc in DMSO, phosphate buffered solution (PBS) and PBS+Triton-X 100 solutions. The fluorescence of the tetra-substituted quaternized zinc phthalocyanine complexes (np-QZnPc/p-QZnPc) are effectively quenched addition of 1,4-benzoquinone (BQ) and this study also presented the ionic zinc phthalocyanine complexes strongly bind to bovine serum albumin (BSA).     

Chromenone 12-crown-4 substituted zinc phthalocyanine complexes: investigation of spectral, photophysical and photochemical properties

The synthesis of novel 6,7-[(12-crown-4)-3-[p-(3,4-dicyanophenoxy)phenyl]coumarin (1), 6,7-[(12-crown-4)-3-[p-(2,3-dicyanophenoxy)phenyl]coumarin (2), and their corresponding tetra-(chromenone 12-crown-4)-substituted zinc (II) phthalocyanine complexes (3 and 4) have been prepared. These new compounds have been characterized by elementel analysis, (1)H NMR (1 and 2), MALDI-TOF, IR and UV-Vis spectral data. The fluorescence intensity changes for 1 and 2 by addition of Na(+) or K(+) ions have been determined at 25°C in THF. Intensity of the binding Na(+)- and K(+)-complexes (1 and 2) have decreased. The effects of the chromenone crown ether on the phthalocyanine molecule concerning photophysical and photochemical properties are also investigated. Photodegredation, singlet oxygen, fluorescence quantum yields, and fluorescence lifetimes of zinc phthalocyanine complexes (3 and 4) are also examined in DMSO.     

'Heat-treatment aqueous two phase system' for purification of serine protease from Kesinai (Streblus asper) leaves

A 'Heat treatment aqueous two phase system' was employed for the first time to purify serine protease from kesinai (Streblus asper) leaves. In this study, introduction of heat treatment procedure in serine protease purification was investigated. In addition, the effects of different molecular weights of polyethylene glycol (PEG 4000, 6000 and 8000) at concentrations of 8, 16 and 21% (w/w) as well as salts (Na-citrate, MgSO? and K?HPO?) at concentrations of 12, 15, 18% (w/w) on serine protease partition behavior were studied. Optimum conditions for serine protease purification were achieved in the PEG-rich phase with composition of 16% PEG6000-15% MgSO?. Also, thermal treatment of kesinai leaves at 55 °C for 15 min resulted in higher purity and recovery yield compared to the non-heat treatment sample. Furthermore, this study investigated the effects of various concentrations of NaCl addition (2, 4, 6 and 8% w/w) and different pH (4, 7 and 9) on the optimization of the system to obtain high yields of the enzyme. The recovery of serine protease was significantly enhanced in the presence of 4% (w/w) of NaCl at pH 7.0. Based on this system, the purification factor was increased 14.4 fold and achieved a high yield of 96.7%.     

Making gold nanoparticles fluorescent for simultaneous absorption and fluorescence detection on the single particle level

We demonstrate a simple way of making individual 20 nm gold nanoparticles fluorescent (with a fluorescence quantum yield of about 10(-6)) in glycerol. Gold NPs prepared in such a way have bright fluorescence for a long time under moderate excitation, and their fluorescence remains when the solvent is exchanged to water. We propose to use these nanoparticles as a calibration standard for simultaneous detection of fluorescence and absorption (by means of photothermal detection), and experimentally demonstrate the theoretically predicted shift in axial positions of these signals. Simultaneous absorption and fluorescence detection of such stable labels makes them attractive for multidimensional tracking and screening applications.     

Feasibility of Using Bimetallic Plasmonic Nanostructures to Enhance the Intrinsic Emission of Biomolecules

Detection of the intrinsic fluorescence from proteins is important in bio-assays because it can potentially eliminate the labeling of external fluorophores to proteins. This is advantageous because using external fluorescent labels to tag biomolecules requires chemical modification and additional incubation and washing steps which can potentially perturb the native functionality of the biomolecules. Hence the external labeling steps add expense and complexity to bio-assays. In this paper, we investigate for the first time the feasibility of using bimetallic nanostructures made of silver (Ag) and aluminum (Al) to implement the metal enhanced fluorescence (MEF) phenomenon for enhancing the intrinsic emission of biomolecules in the ultra-violet (UV) spectral region. Fluorescence intensities and lifetimes of a tryptophan analogue N-acetyl-L-tryptophanamide (NATA) and a tyrosine analogue N-acetyl-L-tyrosinamide (NATA-tyr) were measured. Increase in fluorescence intensities of upto 10-fold and concurrent decrease in lifetimes for the amino acids were recorded in the presence of the bimetallic nanostructures when compared to quartz controls. We performed a model protein assay involving biotinylated bovine serum albumin (bt-BSA) and streptavidin on the bimetallic nanostructured substrate to investigate the distance dependent effects on the extent of MEF from the bimetallic nanostructures and found a maximum enhancement of over 15-fold for two layers of bt-BSA and streptavidin. We also used finite difference time domain (FDTD) calculations to explore how bimetallic nanostructures interact with plane waves and excited state fluorophores in the UV region and demonstrate that the bimetallic substrates are an effective platform for enhancing the intrinsic emission of proteins and other biomolecules.