Quasirelativistic energy-consistent 5f-in-core pseudopotentials for divalent and tetravalent actinide elements

Quasirelativistic energy-consistent 5f-in-core pseudopotentials modeling divalent (5f ⁿ⁺¹ occupation with n = 5–13 for Pu–No) respectively tetravalent (5f ^n-1 occupation with n = 1–9 for Th–Cf) actinides together with corresponding core-polarization potentials have been generated. Energy-optimized (6s5p4d) and (7s6p5d) valence basis sets as well as 2f1g correlation functions have been derived and contracted to polarized double, triple, and quadruple zeta quality. Corresponding smaller (4s4p) and (5s5p) respectively (4s4p3d) and (5s5p4d) basis sets suitable for calculations on actinide(II) respectively actinide(IV) ions in crystalline solids form subsets of these basis sets designed for calculations on molecules. Results of Hartree–Fock test calculations for actinide di- and tetrafluorides show a satisfactory agreement with calculations using 5f-in-valence pseudopotentials. Electronic Supplementary Material The online version of this article doi: contains supplementary material, which is available to authorized users.     

Proteomic analysis of the human colon carcinoma cell line (LIM 1215): development of a membrane protein database

The proteomic definition of plasma membrane proteins is an important initial step in searching for novel tumor marker proteins expressed during the different stages of cancer progression. However, due to the charge heterogeneity and poor solubility of membrane-associated proteins this subsection of the cell's proteome is often refractory to two-dimensional electrophoresis (2-DE), the current paradigm technology for studying protein expression profiles. Here, we describe a non-2-DE method for identifying membrane proteins. Proteins from an enriched membrane preparation of the human colorectal carcinoma cell line LIM1215 were initially fractionated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE, 4-20%). The unstained gel was cut into 16 x 3 mm slices, and peptide mixtures resulting from in-gel tryptic digestion of each slice were individually subjected to capillary-column reversed phase-high performance liquid chromatography (RP-HPLC) coupled with electrospray ionization-ion trap-mass spectrometry (ESI-IT-MS). Interrogation of genomic databases with the resulting collision-induced dissociation (CID) generated peptide ion fragment data was used to identify the proteins in each gel slice. Over 284 proteins (including 92 membrane proteins) were identified, including many integral membrane proteins not previously identified by 2-DE, many proteins seen at the genomic level only, as well as several proteins identified by expressed sequence tags (ESTs) only. Additionally, a number of peptides, identified by de novo MS sequence analysis, have not been described in the databases. Further, a "targeted" ion approach was used to unambiguously identify known low-abundance plasma membrane proteins, using the membrane-associated A33 antigen, a gastrointestinal-specific epithelial cell protein, as an example. Following localization of the A33 antigen in the gel by immunoblotting, ions corresponding to the theoretical A33 antigen tryptic peptide masses were selected using an "inclusion" mass list for automated sequence analysis. Six peptides corresponding to the A33 antigen, present at levels well below those accessible using the standard automated "nontargeted" approach, were identified. The membrane protein database may be accessed via the World Wide Web (WWW) at http://www.ludwig. edu.au/jpsl/jpslhome.html.     

Relativistic DMRG calculations on the curve crossing of cesium hydride

Over the past few years, it has been shown in various studies on small molecules with only a few electrons that the density-matrix renormalization group (DMRG) method converges to results close to the full configuration-interaction limit for the total electronic energy. In order to test the capabilities of the method for molecules with complex electronic structures, we performed a study on the potential-energy curves of the ground state and the first excited state of 1sigma+ symmetry of the cesium hydride molecule. For cesium relativistic effects cannot be neglected, therefore we have used the generalized arbitrary-order Douglas-Kroll-Hess protocol up to tenth order, which allows for a complete decoupling of the Dirac Hamiltonian. Scalar-relativistic effects are thus fully incorporated in the calculations. The potential curves of the cesium hydride molecule feature an avoided crossing between the ground state and the first excited state, which is shown to be very well described by the DMRG method. Compared to multireference configuration-interaction results, the potential curves hardly differ in shape, for both the ground state and the excited state, but the total energies from the DMRG calculations are in general consistently lower. However, the DMRG energies are as accurate as corresponding coupled cluster energies at the equilibrium distance, but convergence to the full configuration-interaction limit is not achieved.     

Relaxation and regularization of nonconvex variational problems

We are interested in variational problems of the form min ∝W(?u) dx, withW nonconvex. The theory of relaxation allows one to calculate the minimum value, but it does not determine a well-defined “solution” since minimizing sequences are far from unique. A natural idea for determining a solution is regularization, i.e. the addition of a higher order term such as ε|??u|². But what is the behavior of the regularized solution in the limit as ε→0? Little is known in general. Our recent work [19, 20, 21] discusses a particular problem of this type, namely min _{u y}=±1 ∝∝u _x ² +ε|u _yy|dxdy with various boundary conditions. The present paper gives an expository overview of our methods and results.     

The reduction of ferricyanides and a sensitive test for the detection of hydrogen peroxide

Yellow zinc ferricyanide is reduced by heating to white zinc ferrocyanide by hydrogen peroxide in the presence of zinc sulphate and sodium, acetate. Copper ferricyanide, however, is reduced to brown copper ferrocyanide at room temperature, by means of hydrogen peroxide in the presence of copper sulphate and sodium acetate. The latter reaction can be applied for the detection of extremely small quantities of hydrogen peroxide both in a test tube (2.5 γ in 1 ml) and as a spot test (0.5 to 1 γ).     

Some important moments in the development of organic elementary analysis

As early as 1784, Lavoisier carried out combustions of organic substances in a glass bell-jar filled with oxygen. No quantitative results were however obtained. In 1810, Gay-Lussac and Thenard burned organic material in a vertical tube with potassium chlorate as oxidizing agent, and analyzed the resulting mixture of gases. Later (1814–1817), Berzelius used a horizontal tube and a mixture of potassium chlorate and sodium chloride, and weighed the water and carbon dioxide formed. In 1831, Liebig described his potash apparatus and created a general method for the analysis of organic substances, in which cupric oxide was the oxidizing agent. The most important advance in organic analysis after LIEBIG is due to Pregl (1912). By his very well known methods of micro-analysis, progress in organic chemistry has been stimulated enormously. The volumetric determination of nitrogen suggested by Dumas in 1833, was developed by Pregl into a micro-method.