Interaction of glucose oxidase with alkyl-substituted sepharose 4B

Glucose oxidase (GOD) is often used in immobilized forms for determination of glucose. To examine the possibility of its adsorption by hydrophobic interactions, palmityl-substituted Sepharose 4B (Sepharoselipid) was employed as an adsorptive matrix. Various conditions were used in tests to improve the limited immobilization of the enzyme observed under normal (native) conditions, including use of high concentrations of denaturing agents. Of the denaturants used, only the cationic detergent dodecyl trimethyl ammonium bromide was effective in denaturing the protein and exposing its hydrophobic sites for interaction with alkyl residues on the support. This, followed by the process of renaturation, provided catalytically active immobilized preparations. The apoenzyme, prepared by treatment of the holoenzyme with acidified (NH4)2SO4 or thermal denaturation, was totally immobilized on the support. Furthermore, it was shown that either flavin adenine dinucleotide (FAD) or the alkyl residues, not both, may interact with the nucleotide site at any given time. Results are discussed in terms of high rigidity of GOD molecule and limited exposure of hydrophobic sites in its native structure. The observations are in accord with suggestions in the literature that the FAD pocket is a very narrow channel of hydrophobic properties, adapted to accept its natural coenzyme.     

Eu(III) macrocyclic complexes promote cleavage of and bind to models for the 5'-cap of mRNA. Effect of pendent group and a second metal ion

The interaction of three Eu(III) macrocyclic complexes Eu(THED)3+, Eu(ATHC)3+, and Eu(ATHC)3+, and Eu(S-THP)3+ with two 5'-cap model compounds, GpppG and m7GpppG is studied (THED = 1,4,7,10-tetrakis(2-hydroxyethyl)-1,4,7,-10-tetraazacyclododecane, ATHC = 1-(carbamoylmethyl)-4,7,10-tris(2-hydroxyethyl)-1,4,7,10- tetraazacyclododecane, S-THP = 1S,4S,7S,10S-tetrakis(2-hydroxypropyl)-1,4,7,10-tetraazacyclododecane). Laser-induced excitation luminescence spectroscopy is used to study the binding of Eu(S-THP)3+ to GpppG (K = 5.9 x 10(4) M-1) and to characterize the Eu(S-THP)-GpppG complex. Both Eu(THED)3+ and Eu(S-THP)3+ bind to m7GpppG as monitored by use of fluorescence spectroscopy with binding constants of 5.9 x 10(3) and 4.4 x 10(4) M-1, respectively. The kinetics of cleavage of GpppG by two macrocyclic complexes is studied. Cleavage of GpppG by Eu(THED)3+ is accelerated by 15-fold in the presence of an equivalent of Zn(NO3)2 at pH 7.3, 37 degrees C, suggesting that two metal ions accelerate the cap cleavage reaction. Eu(ATHC)3+ promotes cleavage of GpppG with a pseudo-first-order rate constant of 2.6 x 10(-5) s-1 at pH 7.3, 37 degrees C, and 0.30 mM complex.     

Effect of electric field strength and exposure time on epoxy and high density polyethylene measured by positron annihilation lifetime

Using the positron annihilation lifetime technique, the annihilation parameters have been measured for epoxy and high density polyethylene (HDPE) as a function of AC electric field strength and the exposure time. The lifetime spectra have been resolved into three components, the longest component (I₃₃) is attributed to the pick-off annihilation of o-Ps in the amorphous regions. The intermediate one (I₂₂) is due to the annihilation of free positrons, while the shorter component (I₁₁) stems from self annihilation of p-Ps. In HDPE, the o-Ps parameters ₃ andI ₃ are measured as a function of electric field strengths in the range from 10 to 100 kV/cm exposed for 24 hours. A decrease inI ₃ of 8% is observed from zero to 50 kV/cm followed by an increase of the same order from 50 to 100 kV/cm. By investigating the effect of the exposure time from 2 to 24 hours at 16 and 50 kV/cm, the effect is confirmed and is attributed to the inhibition of o-Ps formation at lower field strength. In epoxy, the effect or exposure time onI ₃ at 166 and 133 kV/cm shows a similar behavior as in HDPE. At 133 kV/cmI ₃ decreases by only 2.5%. On the other hand, the changes in ₃ occur at short exposure times. Again at large times the saturation is obtained. These effects are attributed to the expansion of free volume (increase of ₃) competing at longer exposure times with other phenomena, such as liberation of free radicals, which reduce the o-Ps intensityI ₃ through the conversion to p-Ps. The reactions between o-Ps and free radicals might also lead to free positrons, which could explain the increase ofI ₂ and the decrease of ₃ at longer exposure times.     

Co(II)5(OH)6(SO4)2(H2O)4: the first ferromagnet based on a layered cobalt-hydroxide pillared by inorganic...OSO3-Co(H2O)4-O3SO..

The synthetic mineral Co(II)5(OH)6(SO4)2(H2O)4 (1), obtained by hydrothermal reaction of CoSO4.7H2O and NaOH at 165 degrees C and consisting of brucite-like Co4(OH)6O2 layers pillared by OSO3-Co(H2O)4-O3SO, is a ferromagnet (T(Curie)= 12 K, Hc= 580 Oe).     

Synthesis, nuclear, and magnetic structures and magnetic properties of [Mn3(OH)2(SO4)2(H2O)2

[Mn(3)(OH)(2)(SO(4))(2)(H(2)O)(2)] and its deuterated analogue were synthesized by a hydrothermal technique and characterized by differential thermal analysis, thermogravimetric analysis, and IR spectroscopy. Its nuclear structure, determined by single-crystal X-ray analysis and Rietveld analysis of neutron powder-diffraction data, consists of a 3D network of chains of edge-sharing Mn(1)O(6), running along the c axis, connected by the apices of Mn(2)O(6) and SO(4) units. It is isostructural to the nickel analogue. Determination of the magnetic structure and measurements of magnetization and heat capacity indicate the coexistence of both magnetic long-range ordering (LRO) and short-range ordering (SRO) below a Néel temperature of 26 K, while the SRO is retained at higher temperatures. The moments of the two independent Mn atoms lie in the bc plane, and that of Mn(1) rotates continuously by 54 degrees towards the c axis on decreasing the temperature from 25 to 1.4 K. While the SRO may be associated with frustration of the moments within a Mn(3) trimer, the LRO is achieved by antiparallel alignment of the four symmetry-related trimers within the magnetic unit cell. A spin-flop field, measured by dc and ac magnetization on a SQUID, is observed at 15 kOe.     

Analytical solution for a steady flow of enclosed rotating disks

Low-Reynolds-number flow plays an important role in the centrifugal separation of fluid particles under microgravity conditions and also in micromechanics due to the miniaturization of fluid mechanical parts. In this situation, the governing equations may be simplified. Here an analytical solution is presented for the steady flow of an incompressible viscous fluid between two finite disks enclosed by a cylindrical container for small Reynolds number (Re 10). The general solution is valid for all choices of the aspect ratio () and different cases of disk to cylinder rotation rates (s). An expression for the torque acting on the disk is obtained. The tangential velocity distribution is calculated and presented graphically for different values of ands. Known results in the literature for a single rotating disk and similar problems follow as a particular case of the general solution presented.

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Zusammenfassung Zahlreiche hydrodynamische Vorgänge unter der Bedingung verminderter Schwerkraft aber auch Vorgänge in der Mikromechanik finden im Bereich kleiner Reynoldszahlen statt. In solchen Situationen können die Bewegungsgleichungen vereinfacht und eventuell analytische Lösungen gefunden werden. In dieser Arbeit wird die stationäre Strömung einer viskosen, inkompressiblen Flüssigkeit für kleine Reynolds- und unterschiedliche Aspektzahlen untersucht. Die Flüssigkeit ist zwischen zwei rotierenden Scheiben und einem zylindrischen Behälter eingeschlossen. Eine analytische Lösung für die Tangentialkomponente des Geschwindigkeitsvektors ist für den allgemeinen Fall, dass die Scheiben und der Behälter unterschiedliche Winkelgeschwindigkeiten besitzen können, dargestellt. Des weiteren wurde eine Beziehung für das Widerstandsmoment der rotierenden Scheibe angegeben. Der Verlauf der Tangentialgeschwindigkeiten für verschiedene Rotations- und Aspektverhältnisse wird graphisch dargestellt und diskutiert. Bereits angegebene Lösungen in der Literatur bezüglich dieser Geometrie können als Sonderfall der hier dargestellten Lösung entwickelt werden.

     

Switching of global minima of novel germylenic reactive intermediates via halogens (X): C2GeH2 vs. C2GeHX at ab initio and DFT levels

For 30 C₂GeHX germylenic isomers, one cyclic structure, X-germacyclopropenylidene, and three acyclics are considered, which include: ethynyl-X-germylene, X-vinylidenegermylene, and (X-ethynyl)germylene (X = H, F, Cl, and Br). The global minimum among six isomeric C₂GeH₂ (where X = H), is found to be cyclic, aromatic, singlet germacyclopropenylidene. In contrast, among the 24 corresponding halogermylenes, C₂GeHX (where X = F, Cl, and Br), the global minima switch to acyclic, singlet ethynylhalogermylenes, at eight reasonably high ab initio and DFT levels. The direct resonance interaction between X and the divalent center Ge in the singlet acyclic ethynylhalogermylene structures, is claimed to justify switching of the calculated global minima in the halo derivatives. GIAO-NICS calculations indicate that the X-germacyclopropenylidene isomer is more aromatic for X = H than X = F, Cl, or Br. The angle ∠XGeC bending potential energy curves show the singlet and triplet ethynylgermylene crossing at ≈146°, for X = H.     

Structure–retardation factor relationship of natural amino acids in two different mobile phases of RP-TLC

Abstract

Separation of amino acids (AAs) and their simple and inexpensive determination/identification is an interesting topic in biological and protein science, different food industries, and drug factories. Also, the presentation of the chromatographic behavior of compounds in a predictive model can be effective to estimate the structural/chemical properties of analyte and mobile phases. In this work for the first time, retardation factor (R_F) of 42 AAs in reversed-phase thin layer chromatography (RP-TLC) was modeled. Acetonitrile-sodium azide solution and 1,2 dioxane-sodium azide solution were two mobile phases which have been studied in this work. Results showed that the values of R_F are correlated with the structural properties of AAs and these properties had some similarities and differences in two noted mobile phases. For the TLC data in two mobile phases, five parametric linear models were suggested (R²_train = 0.93 and 0.97; R²_test = 0.93 and 0.99). The models were also evaluated with different statistical approaches. It was shown that increasing the sum of geometrical distances between N and O in AAs causes decreasing their R_F in RP-TLC using both mobile phases. Other structural effects of AAs on their separation in the desired RP-TLC system were also discussed.     

Crystal structures, electronic properties, and pressure-induced superconductivity of the tetrahedral cluster compounds GaNb(4)S(8), GaNb(4)Se(8), and GaTa(4)Se(8)

The crystal structures of the tetrahedral cluster compounds GaNb(4)S(8) and GaTa(4)Se(8) were determined by single-crystal X-ray diffraction. They crystallize in the cubic GaMo(4)S(8) structure type (F3m), which can be derived from the spinel type by shifting the metal atoms off the centers of the chalcogen octahedra along [111]. Electrical resistivity and magnetic susceptibility measurements show that the electronic conduction originates from hopping of localized unpaired electrons (S = (1)/(2)) among widely separated Nb(4) or Ta(4) clusters, and thus these materials represent a new class of Mott insulators. Under high pressure we find that GaNb(4)S(8) undergoes a transition from the Mott insulating to a superconducting state with T(C) up to 4 K at 23 GPa, similar to GaNb(4)Se(8) and GaTa(4)Se(8). High-pressure single-crystal X-ray studies of GaTa(4)Se(8) reveal that the superconducting transition is connected with a gradual decrease of the octahedral distortion with increasing pressure. DFT band structure calculations show that weakly coupled cluster orbitals are responsible for a high density of states at the Fermi level. The correct insulating magnetic ground state for GaNb(4)S(8) with mu(eff) = 1.73 mu(B) is for the first time achieved by the LDA+U method using U = 6 eV and rhombohedral symmetry.