Fluorescent Molecular Recognition and Sensing System of Bis-Dansyl Modified γ-Cyclodextrins

Flexible hosts, 6A,6B-; 6A,6C-; 6A,6D-; and 6A,6E-bis dansylglycine-modified -cyclodextrins (-1, -2, -3, and -4, respectively) have been synthesized as a sensing molecule for organic guests including terpenoids and bile acids. These host compounds show a pure monomer fluorescence whose intensity is decreased or enhanced upon addition of guest species. The value I/I₀, where I and I₀ are fluorescence intensities in the presence and absence of a guest and I is I₀- I, was used as a parameter of sensitivity. These hosts exhibit highly sensitive and selective molecular recognition ability, particularly, for lithochoic acid, chenodeoxycholic acid, and ursodeoxycholic acid. The behaviors of the appended moieties of these hosts when host–guest complexation occurs are studied by induced circular dichroism (ICD) spectra and fluorescence spectral change on accommodation of a guest. The ICD pattern of these hosts alone or on accommodation of a guest is very similar, indicating that the behavior of the appended moieties are very similar. The guest-induced variations in the fluorescence or ICD intensity suggest that the appended moieties act as a hydrophobic cap that enables the cyclodextrin to form 1 : 1 host–guest complexes.     

Chain-growth polycondensation for well-defined aramide. Synthesis of unprecedented block copolymer containing aramide with low polydispersity

Poly(p-benzamide) with a defined molecular weight and a low polydispersity and a block copolymer containing this well-defined aramide was synthesized. Phenyl 4-aminobenzoate, which would yield poly(p-benzamide), did not polymerize under the conditions of chain-growth polycondensation. However, phenyl 4-(4-octyloxybenzylamino)benzoate (1b) polymerized at room temperature in the presence of base and phenyl 4-nitrobenzoate (2) as an initiator in a chain-growth polycondensation manner to give well-defined aromatic polyamides having the 4-octyloxybenzyl groups as a protecting group on nitrogen in an amide. It was confirmed by a model reaction that deprotection of this protecting group proceeded completely with trifluoroacetic acid (TFA) without breaking the amide linkage. The utility of this approach to poly(p-benzamide) with a low polydispersity was demonstrated by the synthesis of block copolymers. Thus, phenyl 4-(octylamino)benzoate (1a) polymerized in the presence of 2 and base, followed by addition of 1b and base to the reaction mixture of the prepolymer to yield the block copolymer of 1a and 1b with a controlled molecular weight and a low polydispersity. The block copolymer was treated with TFA, resulting in a soluble block copolymer of poly(N-octyl-p-benzamide) and poly(p-benzamide). The SEM images of the supramolecular assemblies of the block copolymer showed mum-sized bundles and aggregates of flake structures.     

Cloning, sequencing, and functional analysis of the biosynthetic gene cluster of macrolactam antibiotic vicenistatin in Streptomyces halstedii

Vicenistatin, an antitumor antibiotic isolated from Streptomyces halstedii, is a unique 20-membered macrocyclic lactam with a novel aminosugar vicenisamine. The vicenistatin biosynthetic gene cluster (vin) spanning approximately 64 kbp was cloned and sequenced. The cluster contains putative genes for the aglycon biosynthesis including four modular polyketide synthases (PKSs), glutamate mutase, acyl CoA-ligase, and AMP-ligase. Also found in the cluster are genes of NDP-hexose 4,6-dehydratase and aminotransferase for vicenisamine biosynthesis. For the functional confirmation of the cluster, a putative glycosyltransferase gene product, VinC, was heterologously expressed, and the vicenisamine transfer reaction to the aglycon was chemically proved. A unique feature of the vicenistatin PKS is that the loading module contains only an acyl carrier protein domain, in contrast to other known PKS-loading modules containing certain activation domains. Activation of the starter acyl group by separate polypeptides is postulated as well.     

Short Communication: Crystal Structure of a Molecular Complex from Native β-Cyclodextrin and Copper(II) Chloride

Reaction of β-cyclodextrin (β-CD) with CuCl₂ in neutral aqueous solutions gave a stable molecular complex without any side-arm support. The X-ray crystallographic analysis clarified that the copper ion was located at the bottom of the primary-hydroxy side as a CuCl₂(H₂O)₂ form. Hydrogen bonds were found between the Cl and H₂O ligands and β-CD hydroxy and ether groups. The copper ion is axially coordinated with a hydroxy group of a neighboring β-CD molecule, giving a one-dimensional β-CD/CuCl₂ array.     

Synthesis and Characterization of Novel Liquid Crystalline Epoxy Resin with Low Melting Point

A liquid crystalline epoxy resin (LCE) having α-methylstilbene as a mesogenic unit and an ethylene-oxy unit as a spacer (DGE(C2-MS-C2)) was synthesized and characterized. DGE (C2-MS-C2) has a lower melting point (MP) compared to the diglycidylether of 4,4′-dihydroxy-α-methylstilbene (DGEDHMS). The curing of DGE (C2-MS-C2) with diaminodiphenylethane (DDEt) in a mesophase generated a liquid crystalline (LC) network, which have a more highly layered structure than DGEDHMS. The LC network showed extensively large fracture energy on a tensile test. Introducing spacers outside the mesogen unit promotes the mesogen unit to form a highly ordered structure, which enhances the versatility of LC epoxy resins.     

An Alternative Method for the Stereospecific Synthesis of Conjugated Alkenynes Via the Copper (I) Iodide Assisted Cross-Coupling Reaction of 1-Akyens with Haloalkenes

Conjugated alkenynes were prepared stereospecifically in moderate to good yields by heating haloalkenes with 1-alkynes in the presence of copper(I) iodide in hexamethylphosphoric triamide (HMPA).     

Stereoscopic story visualization in literary works demonstrated by Shakespeare’s plays

Abstract  

A stereoscopic method of identifying story patterns in literary works is newly developed. The pattern is extracted from textual information by the detection of thematically assigned keywords, and depicted as visual imageries. The applicability of the method is demonstrated in several of Shakespeare’s plays. The complex scenario patterns in Shakespeare’s tragedies are successfully captured with applying the method for two different themes in each play. As the result, the organization of story accompanying multiple themes in a single play has been obtained as a pair of visual imageries, i.e. stereoscopic story visualization. This approach, in combination with a quadrant analysis of the plots, allows us in interpretation further complexity of human psychology in the characters and scene-by-scene transitions in each play.     

Design of Ratiometric Fluorescent Probes Based on Arene–Metal‐Ion Interactions and Their Application to CdII and Hydrogen Sulfide Imaging in Living Cells

Non‐coordinative interactions between a metal ion and the aromatic ring of a fluorophore can act as a versatile sensing mechanism for the detection of metal ions with a large emission change of fluorophores. We report the design of fluorescent probes based on arene–metal‐ion interactions and their biological applications. This study found that various probes having different fluorophores and metal binding units displayed significant emission redshift upon complexation with metal ions, such as Ag^I, Cd^II, Hg^II, and Pb^II. X‐ray crystallography of the complexes confirmed that the metal ions were held in close proximity to the fluorophore to form an arene–metal‐ion interaction. Electronic structure calculations based on TDDFT offered a theoretical basis for the sensing mechanism, thus showing that metal ions electrostatically modulate the energy levels of the molecular orbitals of the fluorophore. A fluorescent probe was successfully applied to the ratiometric detection of the uptake of Cd^II ions and hydrogen sulfide (H₂S) in living cells. These results highlight the utility of interactions between arene groups and metal ions in biological analyses.     

Diastereoselective photochromism of bisbenzothienylethenes with an oxycarbonyl-related functional group on the side chain

Nine 1-[2-(1-substituted)ethyl-3-benzothienyl]-2-(2-methyl-3-benzothienyl)hexafluorocyclopentenes (4-substituted benzoyloxy, N-arylcarbamoyloxy, and aryloxycarbonyloxy) were synthesized. They showed diastereoselective photochromic ring closure upon UV irradiation. Among them, 4-nitrophenoxycarbonyloxy-substituted compound recorded a remarkable 94% diastereomer excess with 91% conversion to the closed form.