A new route to 2'-O-alkyl-2-thiouridine derivatives via 4-O-protection of the uracil base and hybridization properties of oligonucleotides incorporating these modified nucleoside derivatives

Oligonucleotides containing 2-thiouridine (s2U) in place of uridine form stable RNA duplexes with complementary RNAs. Particularly, this modified nucleoside has proved to recognize highly selectively adenosine, the genuine partner, without formation of a mismatched base pair with the guanosine counterpart. In this paper, we describe new methods for the synthesis of 2-thiouridine and various 2'-O-alkyl-2-thiouridine derivatives. Oligoribonucleotides having these modified nucleoside derivatives were synthesized, and their hybridization and structural properties were studied in detail by the 1H NMR analysis of these modified nucleosides and Tm experiments of RNA duplexes with their complementary RNA strands.     

A highly sensitive spectrophotometric determination of beryllium with chromal blue G and cetyltrimethylammonium chloride

Chromal blue G in the presence of cetyltrimethylammonium chloride is proposed for the spectrophotometric determination of microgram amounts of beryllium. The sensitivity of color reaction between beryllium and chromai blue G has been greatly increased by the sensitizing action of cetyltrimethylammonium chloride (_626nm = 93,000). Beer's law is obeyed over the range 0.012–0.12 ppm of beryllium. Full color development occurs in 20 min at pH 5.5 and at 626 nm. The mole ratio of beryllium and chromai blue G in the complex is estimated to be 1:2. The proposed method is very sensitive and selective for determination of beryllium when EDTA is used as a masking agent.     

Phenomenological analysis of elongational flow birefringence in semidilute solutions of hydroxypropylcellulose

The relaxation time of a polymer chain in an elongational flow field was investigated for hydroxypropylcellulose (HPC) semidilute solution systems by two methods: phenomenological analysis of elongational flow-induced birefringence, and dynamic light scattering (DLS) and rheological measurements. To understand the relaxation time of an entangled semiflexible polymer solution in an elongational flow field, scaling analysis of the elongational flow-induced birefringence curve was performed. The results of both temperature and concentration scaling analyses showed that birefringence curves at different temperatures and at several HPC concentrations were described well by a universal birefringence–strain rate curve. This scaling behavior was compared with the "fuzzy cylinder" model. The critical strain rate corresponded to the correlation time of the slow relaxation mode determined by DLS measurement and the relaxation spectrum obtained by dynamic viscoelasticity measurement. The elongational flow-induced birefringence observed in an HPC semidilute solution was concluded to be attributed to the orientation of the HPC segment in the entangled molecular system, because the dominant relaxation mode is found to be the concentration fluctuation of an entangled molecular cluster in a quiescent state.     

Selective vinyl cationic polymerization of monomers with two cationically polymerizable groups. II. p-vinylphenyl glycidyl ether: An epoxy-functionalized styrene

p-Vinylphenyl glycidyl ether (VPGE), a styrene derivative with an epoxy pendant, was polymerized by various cationic initiators, and its selective vinyl polymerization was investigated at low temperatures below ?15°C. BF₃OEt₂ (a metal halide) and CF₃SO₃H (a strong protonic acid) polymerized both vinyl and epoxy groups of VPGE, and produced cross-linked insoluble polymers. The HI/I₂ initiating system and iodine, in contrast, polymerized its vinyl group in polar solvents (CH₂Cl₂ and nitroethane) highly selectively in the temperature range of ?15 to ?40°C to give soluble polymers with a polystyrene backbone and epoxy pendants; however, under these conditions, 10–15% of the epoxy groups of the polymers were consumed during the polymerization by the reaction with the growing species. The polymerization by HI/I₂ in CH₂CI₂ involved a long-lived propagating species, as indicated by a progressive increase in the molecular weight (M?_n) of the polymers with monomer conversion and their fairly narrow molecular weight distributions (M?_w/M?_n ～ 1.6). The differences between the polymerizations of VPGE and p-isopropenylphenyl glycidyl ether, an α-methylstyrene-type counterpart of VPGE, were also discussed with an emphasis on the effects of the α-methyl group in the latter monomer.     

Photolysis of organopolysilanes. The reaction of photochemically generated methylphenylsilylene with conjugated dienes

Photolysis of 2-phenylheptamethyltrisilane (I) in the presence of acyclic and cyclic conjugated dienes has been investigated using both a high-pressure mercury lamp with a quartz filter and a low-pressure mercury lamp with a Vycor filter. Irradiation of I in the presence of 1,3-butadiene, isoprene or 2,3-dimethylbutadiene with a high-pressure mercury lamp gave a product arising from photochemical isomerization of a silacyclopropane derivative and a compound apparently formed by 1,4-silylene addition, along with a 1/1 “ene” adduct of the diene to a photo-rearranged intermediate containing the silicon—carbon double bond. Irradiation of I in the presence of the conjugated diene with a low-pressure mercury lamp, followed by treatment of the product with methanol, afforded a methoxysilane arising from methanolysis of the corresponding silacyclopropane, together with the isomerization product, silacyclopentene and rearranged addition product. Irradiation of I in the presence of cyclopentadiene with a high-pressure mercury lamp produced methylphenylsilylcyclopentadiene, while irradiation of a similar mixture with a low-pressure mercury lamp followed by treatment with methanol gave 4-(methoxymethylphenylsilyl)-1-cyclopentene. With 1,3-cyclooctadiene, the photochemically generated methylphenylsilylene afforded many types of addition product. Photolysis of I in the presence of 1,3-cyclohexadiene, however, afforded none of the silylene addition products.     

Cationic polymerization of p-methylstyrene initiated by acetyl perchlorate: An approach to living polymerization

The cationic polymerization of p-methylstyrene initiated by acetyl perchlorate at ?78°C led to long-lived (living-like) polymers with a narrow molecular weight distribution (M?_w/M?_n = 1.1–1.4) in methylene chloride containing a common ion salt (n-Bu₄NClO₄) or in a less polar solvent (CH₂Cl₂/toluene, 1/4v/v). Under these conditions, the number-average molecular weight (M?_n) of the polymers increased in proportion to monomer conversion and was regulated by the monomer-to-initiator ratio. When fresh feeds of the monomer were repeatedly added to a completely polymerized solution, the polymerization ensued at the same rate as before and the linear increase in M?_n with monomer conversion continued. The effects of solvent polarity and the common ion salt on the polymerization showed the suppression of the ionic dissociation of the propagating species, resulting in a “nondissociated species,” to be the key factor for the formation of the long-lived polymers.     

Electronic polarizability and crystallization of K2O-TiO2-GeO2 glasses with high TiO2 contents

Some K₂O-TiO₂-GeO₂ glasses with a large amount of TiO₂ contents (15-25 mol%) such as 25K₂O-25TiO₂-50GeO₂ have been prepared, and their electronic polarizability, Raman scattering spectra, and crystallization behavior are examined to clarify thermal properties and structure of the glasses and to develop new nonlinear optical crystallized glasses. It is proposed that the glasses consist of the network of TiO₆ and GeO₄ polyhedra. The glasses show large optical basicities of Λ=0.88-0.92, indicating the high polarizabity of TiO_n (n=4-6) polyhedra in the glasses. K₂TiGe₃O₉ crystals are formed through crystallization in all glasses prepared in the present study. In particular, 20K₂O-20TiO₂-60GeO₂ glass shows bulk crystallization and 18K₂O-18TiO₂-64GeO₂ glass exhibits surface crystallization giving the c-axis orientation. The crystallized glasses show second harmonic generations (SHGs), and it is suggested that the distortion of TiO₆ octahedra in K₂TiGe₃O₉ crystals induces SHGs.     

Construction of optically active CF3-containing quaternary carbon centers via stereospecific S(N)2' reaction

[reaction: see text] Phosphates from 3-substituted 4,4,4-trifluorobut-2-en-1-ols were found to be effective for construction of CF3-containing quaternary carbon centers by way of Cu(I)-catalyzed Grignard reactions in the presence of catalytic amounts of CuCN and trimethylsilyl chloride (TMSCl) in an anti S(N)2' manner.     

Self-organized lipid-porphyrin bilayer membranes in vesicular form: nanostructure,photophysical properties,and dioxygen coordination

An amphiphilic tetraphenylporphyrin and its iron complex bearing four phospholipid substituents, in which a trimethylolethane residue connects the two acyl chains (lipid-porphyrins), have been synthesized. The free-base lipid-porphyrin 6a self-organizes in aqueous media to form spherical unilamellar vesicles with a diameter of 100 nm and a uniform thickness of 10 nm, which corresponds to twice the length of the molecule. In the visible absorption spectrum, the porphyrin Soret band was significantly red-shifted (12 nm) relative to that of the monomer in benzene/MeOH solution due to the excitonic interaction of the porphyrin chromophores. The [symbol: see text]-A isotherm of 6a gave an area per molecule of 2.2 nm2, which allowed the estimation of the number of molecules in a single vesicle (2.3 x 10(4)). Double-layered Langmuir-Blodgett (LB) films of 6a on a glass surface exhibited an absorption spectrum identical to that of the 6a vesicles in bulk aqueous solution, and this suggests that they contain similar geometric arrangements of the porphyrin moieties. Exciton calculations on the basis of our structural model reproduced the bathochromic shift of the Soret band well. In the photophysical properties of the 6a vesicles, the characteristics of J-aggregated porphyrins substantially predominate: strong fluorescence and extremely short triplet lifetime. The iron complex 6b with a small molar excess of 1-dodecylimidazole (DIm) also formed spherical unilamellar vesicles (100 nm phi). Scanning force microscopy after evaporation on a graphite surface revealed 6b/DIm vesicles with a vertical height of 19.8 nm, which coincided with the thickness of the double bilayer membranes. The ferrous 6c formed a bis(DIm)-coordinated low-spin FeII complex under an N2 atmosphere. Upon addition of O2 to this solution, a kinetically stable O2 adduct was formed at 37 degrees C with a half-life of 17 h. Distinct gel-phase (liquid-crystal) transitions of the lipid-porphyrin membranes were clearly observed; the free base 6a displayed a higher transition temperature (56 degrees C) than the iron complex. Magnetic circular dichroism and infrared spectroscopic studies proved that molecular O2 coordinates to the self-organized lipid-porphyrinatoiron(II) vesicles in aqueous media.     

Rapid colorimetric determination of manganese in waters containing iron : A modification of the formaldoxime method

A rapid photometric method with formaldoxime is described for the determination of small amounts of manganese in waters containing iron. The iron formaldoxime formed is decomposed by addition of EDTA and hydroxylamine after development of the manganese-formaldoxime color. Beer's law holds up to 3 mg Mn/1. Up to 25 mg iron(II) or (III) per 1 can be tolerated.