Interaction between poly[(R)-3-hydroxybutyrate] depolymerase and biodegradable polyesters evaluated by atomic force microscopy

Adsorption of PHB depolymerase from Ralstonia pickettii T1 to biodegradable polyesters such as poly[(R)-3-hydroxybutyrate] (PHB) and poly(l-lactic acid) (PLLA) was investigated by atomic force microscopy (AFM). The substrate-binding domain (SBD) with histidines within the N-terminus was prepared and immobilized on the AFM tip surface via a self-assembled monolayer with a nitrilotriacetic acid group. Using the functionalized AFM tips, the force-distance measurements for polyesters were carried out at room temperature in a buffer solution. In the case of AFM tips with immobilized SBD and their interaction with polyesters, multiple pull-off events were frequently recognized in the retraction curves. The single rupture force was estimated at approximately 100 pN for both PLLA and PHB. The multiple pull-off events were recognized even in the presence of a surfactant, which will prevent nonspecific interactions, but reduced when using polyethylene instead of polyesters as a substrate. The present results provide that the PHB depolymerase adsorbs specifically to the surfaces of polyesters and that the single unbinding event evaluated here is mainly associated with the interaction between one molecule of SBD and the polymer surface.     

Molecular dynamics simulation study on the phase behavior of the Gay-Berne model with a terminal dipole and a flexible tail

To study the effect of the alkyl tail and the terminal dipole on the stability of the liquid crystalline phase of mesogens, we have carried out molecular dynamics simulations for 1CB(4-methyl-4'-cyanobiphenyl) and 5CB(4-n-pentyl-4'-cyanobiphenyl) by using a coarse-grained model. In the coarse-grained model, a 5CB molecule is divided into the rigid part of 1CB moiety, which is represented by an ellipsoid, and the remaining flexible part which is represented by a chain of united atoms. The nonbonded potential between coarse-grained segments is represented by the generalized Gay-Berne (GB) potential and the potential parameters are determined by directly comparing the GB potential with the atomistic potentials averaged over the rotation of the mesogen around its axis. In addition, a dipole moment is placed at one end of the ellipsoid opposite to the flexible tail. The ordered state obtained in the polar 5CB model was assigned as the nematic phase, and the experimental static and dynamical properties were reproduced well by using this coarse-grained model. Both the dipole-dipole interactions and the thermal fluctuation of the flexible tail increase the positional disorder in the director direction, and stabilize the nematic phase. Thus, the nematic phase in the polar 5CB is induced by a cooperative effect of the flexible tail and the terminal dipole. It is noted that a local bilayer structure with head-to-head association is formed in the nematic phase, as experimentally observed by x-ray diffraction measurements.     

Syntheses of anthraquinone capped hairpin DNAs and electrochemical redox responses from their self-assembled monolayers on gold electrode

An anthraquinone (AQ) based DNA linker and hairpin-forming DNAs linked by the AQ linker with variable A-T base pairs were synthesized for the investigation of electron transfer through double helical DNA (DNA-ET) in self-assembled monolayers (SAMs). The spectroscopic analysis of absorption spectra indicated that the AQ of the hairpin DNA stacked with adjacent A-T base pair. Electrochemical redox response due to the AQ was observed from the hairpin DNA immobilized on gold electrode, thus the hairpin DNA is suitable for the investigation of DNA-ET in SAMs.     

Effect of Metallic Oxides Containing Composite Electrodes on Crystallization and Ferroelectric Properties of Pb(Zr0.52,Ti0.48)O3 Thin Films Deposited by the Sol-Gel Method

In order to suppress polarization fatigue and decrease the leakage current of the PZT capacitor, composite electrodes consisting of MO₂ (RuO_x or IrO_x) as an effective diffusion barrier and considerably large amounts of Pt were deposited by magnetron co-sputtering to yield heterostructured PZT capacitors, Pt/(Pt+MO₂)//PZT(52/48)//(Pt+MO₂)/(Pt+M)/M/Pt/Ti(Ta)/SiO₂/Si(1 0 0), and the crystallinity and the orientation, the morphology of the surface and the cross section, and the composition depth profile of the PZT capacitor were examined by XRD analysis, SEM and AES, respectively, and the ferroelectric properties were measured. The results indicated that by adjusting the distribution and composition of the RuO₂ phase, the polarization loss of the PZT capacitor can be suppressed to as small as 5% after polarization reversals of 10⁹ while maintaining the effective polarization dP_r = P_r* – P_r ^{^} at 15 C/cm². The suppression of the polarization fatigue was found more effective with (Pt+IrO₂) electroding than (Pt+RuO₂) electroding. The leakage current of the PZT capacitor electroded with (Pt+MO₂) was a little larger than that of the PZT capacitor with Pt electrode. The possible reason was suggested.     

Deformation cubic anvil press and stress and strain measurements using monochromatic X-rays at high pressure and high temperature

A system for deformation experiments under high pressure using a deformation cubic apparatus, with monochromatic synchrotron radiation, has been developed at beamline AR-NE7A, Photon Factory, KEK High Energy Accelerator Research Organization, Japan. We have conducted deformation experiments of fayalite using this new system at pressures up to 5 GPa and temperatures up to 1073 K, and successfully conducted the stress and strain measurements during the deformation.     

Effects of strain field in nitrogen-mediated Co film growth on Cu(0 0 1): Segregation and electronic structure change

Growth modes of Co thin films on the both N-saturated and partially N-adsorbed Cu(0 0 1) surfaces are studied in detail. From results of the STM and XPS measurements, segregation of N atoms depending on the Co island size is concluded. This new type of atom segregation is explained by means of a lattice strain of the substrate due to the small Co island formation. A novel core-level shift of N 1s during the Co film growth is also reported. A possible influence of the lattice strain to the electronic structure of the surfactant is discussed.