Protein Separation and Enzyme Purification by Preparative Capillary Isotachophoresis

The use of preparative capillary isotachophoresis (CITP), operating in a discontinuous fractionation mode, for separation and fast purification of the enzyme uridine diphosphate galactopyranose mutase (UGM) from the cell extract of Escherichia coli overproducing the recombinant enzyme is presented in this feasibility study. UGM is required to produce galactofuranose for the cell wall biosynthesis of many pathogenic microorganisms and represents a very attractive candidate for the development of new antimicrobial drugs. CITP separations were carried out under slightly alkaline pH conditions (8.7), in which UGM enzyme is negatively charged. Significantly simplified proteinous matrix isolated in several fractions by employed preparative CITP procedure with the aid of properly selected discrete spacers was subsequently confirmed by SDS PAGE with Coomassie staining. It was shown that preparative CITP is very effective tool for fast purification of the target enzyme from other proteinous matrix constituents when purification and isolation step lasted 20 min. The enzymatic activity of UGM was confirmed in the sample after the preparative CITP purification step, which is a crucial requirement for further biochemical applications.     

Continuous flow electrophoretic separation — Recent developments and applications to biological sample analysis

Continuous flow electrophoretic separation with continuous sample loading provides the advantage of processing volumes of any sizes, as well as the benefit of a real-time monitoring and optimization of the separation process. In addition, the spatial separation of the sample enables collecting multiple separated components simultaneously and in a continuous manner. The separation is usually performed in mild buffers without organic solvents and detergents (sample biological activity is retained) and it is carried out without usage of a solid support in the separation space preventing the interaction of the sample with it (high sample recovery). The method is used for the separation of proteins/peptides in proteomic applications, and its great applicability is to the separation of the cells, cellular organelles, vesicles, membrane fragments, and DNA. This review focuses on the electrophoretic separation performed in a continuous flow and it describes various electrophoretic modes and instrumental setups. Recent developments in methodology and instrumentation, the integration with other techniques, and the application to the biological sample analysis are discussed as well.     

Electrorheology of aniline oligomers

Aniline oligomers were prepared by the oxidation of aniline with p-benzoquinone in aqueous solutions of methanesulfonic acid (MSA) of various concentrations. Their molecular structures were assessed by Fourier transform infrared spectroscopy. The electrorheological (ER) behavior of their silicone oil suspensions under applied electric field has been investigated. Shear stress at a low shear rate, τ _0.9, was used as a criterion of the rigidity of internal structures created by the application of an electric field. It was established from the fitting of the dielectric spectra of the suspensions with the Havriliak–Negami model that dielectric relaxation strength, as a degree of polarization induced by an external field contributing to the enhanced ER effect, increases and relaxation time, i.e., the response of the particle to the application of the field, decreases when a higher molar concentration of MSA is used. The best values were observed for suspensions of the sample prepared in the presence of 0.5 M of MSA. This suspension creates stiff internal structures under an applied electric field strength of 2 kV mm^?1 with τ _0.9 of nearly 50 Pa, which is even slightly of higher value than that obtained for standard polyaniline base ER suspension measured at the same conditions. The concentration of the MSA used in the preparation of oligomers seems to be a crucial factor influencing the conductivity, dielectric properties and, consequently, rheological behavior, and finally ER activity of their suspensions.     

Total synthesis of N,O,O,O-tetraacetyl-d-ribo-phytosphingosine and its 2-epi-congener

Total synthesis of the natural d-ribo-phytosphingosine I and its 2-epimer III in the protected form was achieved through a common strategy. The aza-Claisen rearrangement of allylic thiocyanate (Z)-V incorporated the new stereogenic centre with nitrogen and the subsequent Wittig olefination constructed a non-polar side chain. Hydrogenation, followed by removal of protecting groups, completed the syntheses of I and III.     

Degradation and toxicity changes in aqueous solutions of chloroacetic acids by Fenton-like treatment using zero-valent iron

Three priority pollutants, i.e. mono-, di-, and trichloroacetic acids, were degraded by the conventional Fenton AOP system (Fe²⁺ and H₂O₂). The results obtained suggest that the degradation decreased in the order: monochloroacetic, dichloroacetic, and trichloroacetic acid. The best of advanced oxidation processes (AOPs) for the degradation of trichloroacetic acid was reductive dechlorination with the use of zero-valent iron (Fe°). The results of Escherichia coli toxicity tests revealed that the reagents’ toxicity after the Fenton treatment process was decreased.     

Preparation of polyaniline in the presence of polymeric sulfonic acids mixtures: the role of intermolecular interactions between polyacids

Polyaniline (PANI) was synthesized by chemical oxidation of aniline in the presence of mixtures of water-soluble poly(sulfonic acids) of different nature. Under these conditions, the use of polyacid templates leads to the formation of interpolymer complexes of PANI and polyacid mixtures. The obtained PANI complexes were characterized by UV, visible, near IR, and Fourier transform infrared spectroscopy. It was shown that the rigidity of the polyacid backbone and the composition of a polyacid mixture affect the electronic structure of PANI complexes and the duration of the induction period of aniline oxidation. Domination of the more rigid-backbone template in the synthesis of PANI complexes with mixtures of the rigid- and flexible-backbone polyacids was observed. According to the viscometry and FTIR spectroscopic data, the reason of the domination is the existence of the intermolecular interaction between the polyacids in the mixture. In this case, duration of the induction period of aniline oxidation was between these values for pure polyacids.     

Influence of ethanol on the chain-ordering of carbonised polyaniline

Polyaniline (PANI) was prepared by the oxidation of aniline hydrochloride with ammonium peroxydisulphate in water or in a water-ethanol mixture. In the presence of ethanol, PANI nanotubes and nanorods were observed. Both products were carbonised in a nitrogen atmosphere at 650°C. Initial and carbonised products were characterised by scanning and transmission electron microscopies, thermogravimetric analysis and wide-angle X-ray scattering. Their molecular structure was studied by UV-VIS, infrared, and Raman spectroscopies. Carbonised sample obtained from the PANI salt prepared in the presence of ethanol exhibits Raman spectrum which corresponds to a more ordered carbon-like material than carbonised samples obtained from the PANI base and the PANI salt prepared in pure water. The influence of ethanol present in the reaction mixture on the molecular and supra-molecular structure of PANI and, consequently, on the enhancement of chainordering of carbonised PANI is discussed.     

The preparation of conducting polyaniline�Csilver and poly(p-phenylenediamine)�Csilver nanocomposites in liquid and frozen reaction mixtures

The oxidation of aniline with silver nitrate in 1?mol?L^?1 acetic acid at 20?°C yielded a composite of two conducting components, polyaniline and silver; the acceleration with 1?mol% of p-phenylenediamine is needed for efficient synthesis. The yield and molecular weight increased when aniline was copolymerized with 10?mol% p-phenylenediamine. Such product displayed metallic conductivity below 180?K and semiconductor type above this temperature. As the result, the conductivity was the same at 100 and 300?K. The oxidation of p-phenylenediamine alone with silver nitrate also produced a conducting composite having the conductivity of 1,750?S cm^?1 despite the assumed nonconductivity of poly(p-phenylenediamine). The present study demonstrates that all oxidations proceeded also in frozen reaction mixtures at ?24?°C, i.e., in the solid state. In most cases, molecular weights of polymer component increased, the conductivity of composites with silver improved, to 2,990?S?cm^?1 for poly(p-phenylenediamine)?Csilver, and remained high after deprotonation with 1?mol?L^?1 ammonium hydroxide.     

Stereoselective synthesis of the polar part of mycestericins E and G

5-O-(t-Butyldimethylsilyl)-3-deoxy-3-C-hydroxymethyl-1,2-O-isopropylidene-3-(methoxycarbonylamino)-α-d-xylofuranose IV has been proved to be an appropriate building block in the stereoselective synthesis of methyl (4S)-4-[(1′R)-1′-acetoxy-4′-oxobutyl]-3-benzyl-2-oxooxazolidine-4-carboxylate III representing the polar part of the naturally occurring mycestericins E and mycestericins G.