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51.
Christopher J. R. Illingworth Sree V. Chintipalli Stefano A. Serapian Andrew D. Miller Vaclav Veverka Mark D. Carr Christopher A. Reynolds 《Journal of computational chemistry》2012,33(16):1440-1447
Sense and antisense peptides, encoded by sense and corresponding antisense DNA strands, are capable of specific interactions that could be a driving force to mediate protein–protein or protein–peptide binding associations. The complementary residue hypothesis suggests that these interactions are founded upon the sum of pairwise interactions between amino acids encoded by corresponding sense and antisense codons. Despite many successful experimental results obtained with the hypothesis, however, the physicochemical basis for these interactions is poorly understood. We examined the potential of the hypothesis for general identification of protein–protein interaction sites, and the possible role of the hypothesis in determining folding in a broad set of protein structures. In addition, we performed a structural study to investigate the binding of a complementary peptide to IL‐1F2. Our results suggest that complementary residue pairs are no more frequent or conserved than average in protein–protein interfaces, and are statistically under‐represented amongst contacting residue pairs in folded protein structures. Although our structural results matched experimental observations of binding between the peptide and IL‐1F2, complementary residue interactions do not appear to be dominant in the bound structure. Overall, our data do not allow us to conclude that the complementary residue hypothesis accounts for specific sense–antisense peptide interactions. © 2012 Wiley Periodicals, Inc. 相似文献
52.
Miroslav Veverka Peter ?imon Ján Lokaj Eva Veverková 《Monatshefte für Chemie / Chemical Monthly》2012,10(4):65-71
Abstract
Crystals of the α-form of imatinib mesylate with various habits (e.g., polyhedral-like and plate-like) were prepared from various organic solvents (e.g., butyl lactate, 4-methyl-2-pentanone, 2-methyl-2-butanol, 2-isopropoxyethanol, propyl ether) by several precipitation methods. The methods provide imatinib mesylate in a non-needle-shaped crystalline α-form. The crystal modification was identified by hot-stage microscopy, scanning electron microscopy, differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FTIR), and X-ray powder diffraction (XRPD). The analyses by DSC, IR, and XRPD indicate that imatinib mesylate crystals with various habits have the same crystal structure. The plate-like habit has been also observed in the system where the organic solvent acts as a precipitant. 相似文献53.
Milica Lukic Ivana Pantelic Rolf Daniels Christel Müller-Goymann Miroslav Savic Snezana Savic 《Journal of Thermal Analysis and Calorimetry》2013,111(3):2045-2057
Mesomorphic behavior of the novel long-chain alkyl polyglucoside emulsifier comprising arachidyl alcohol (C20), behenyl alcohol (C22), and arachidyl glucoside was investigated in order to determine the prevalent stabilization mechanism and moisturizing capacity of emulsion systems based on it. For this to be accomplished thermoanalytical methods (differential scanning calorimetry and thermogravimetric analysis) coupled with microscopy, rheological, X-ray diffraction methods and a short-term in vivo study of skin hydration level were performed. Obtained results have proved that C20/C22 alkyl polyglucoside mixed emulsifier is able to provide the synergism between the two main types of lamellar phases, the liquid-crystalline (Lα), and the gel crystalline (Lβ) one, building the emulsion systems of different stability and performance. Formation of lamellar structures influenced for more than one half of water within the system to be entrapped. Conducted investigation of hydration potential in real-time conditions provided valuable information on the investigated emulsion vehicles’ moisturizing potential as well as their contribution to the skin barrier improvement. Therefore, it could be expected that emulsions based on this alkyl polyglucoside emulsifier could influence the delivery of active ingredients of both the lipophilic and hydrophilic type. The employment of thermoanalytical methods in our work suggests the possibility for thermal methods to be used more frequently in the characterization of both the novel raw materials and the belonging emulsion systems. 相似文献
54.
Vladimíra Novotná Věra Hamplová Miroslav Kašpar Milada Glogarová Karel Knížek Siegmar Diele 《Liquid crystals》2013,40(8):967-975
New mesogens composed of achiral bent molecules with thermally stable ester linkages, and laterally substituted by a methoxy group symmetrically near the central benzene ring, were synthesized. Texture, calorimetric, electro‐optical, X‐ray and dielectric measurements were performed. In most of studied compounds the antiferroelectric B2 phase was found on cooling from the isotropic phase, followed by the B7 phase at lower temperatures. Undulation of layers in the B7 phase was confirmed by precise synchrotron studies. 相似文献
55.
Alexey Bobrovsky Valery Shibaev Věra Hamplová Miroslav Kašpar Vladimira Novotna Milada Glogarová 《Liquid crystals》2013,40(9):989-997
A photoinduced phase transition and helix untwisting in a new liquid crystal forming the SmC* phase were studied in detail. The compound consists of a cinnamoyl photosensitive fragment with C?=?C double bond capable of photoisomerisation and photocycloaddition. It was shown that ultraviolet (UV) irradiation (365 nm) induces an extreme decrease in phase transitions temperatures (SmC*–SmA*, SmA*–N*, N*–I). Vertically aligned samples in the SmC* phase cause selective light reflection in the visible spectral range. The light action results in a noticeable helix untwisting that causes a shift in the selective light reflection peak to the long-wavelength spectral region. The temperature dependence of spontaneous polarisation P s was measured and it was found that UV irradiation induces a decrease in the values of P s. Photo-optical phenomena taking place in the liquid crystal are attributed to the formation of photoproducts having low anisometry, which disrupts mesophases. 相似文献
56.
Jiří Pryček Miroslav Ciganek Zdeněk Šimek 《International journal of environmental analytical chemistry》2013,93(5):313-324
An analytical method based upon the pressurised solvent extraction and gas chromatography and mass spectrometry (GC-MS) for analysis of nitrated derivatives of polycyclic aromatic hydrocarbons (nitro-PAHs) in roadside dust has been developed. Five nitro-PAHs (1-nitronaphthalene, 1-nitropyrene, 9-nitroanthracene, 2-nitrofluorene, 6-nitrochrysene) were chosen for this study because of their variable physical properties and effect on human health. Experiments with spiked inert matrix were used for the best extraction conditions finding. Different extraction conditions (temperature, pressure, solvents and duration of extraction cycle) were examined. The highest recoveries were observed at the extraction pressure of 14?MPa, temperature of 100°C and two cycles of 5?min extraction time, when dichloromethane was used as an extraction solvent. These conditions were applied to the extraction of nitro-PAHs from roadside dust. After extraction the nitro-PAHs fraction was isolated by the silica gel column chromatography. The GC-MS detector was used for analyses of the extracts. Recoveries of nitro-PAHs after extraction from roadside dust ranged from 60% for 9-nitroanthracene to 108% for 6-nitrochrysene. 相似文献
57.
Tomasz Kowalkowski Hlanganani Tutu Leonard Mihaly Cozmuta Miroslav Sprynskyy Ewa M. Cukrowska Bogusław Buszewski 《International journal of environmental analytical chemistry》2013,93(10):797-811
The objectives of this study were to evaluate the mobility of heavy metals (HMs) in two types of soils (acidic forest soil and neutral agricultural soil) by leaching with calcium chloride solution in column experiments. The screening properties of neutral agricultural soil towards pollution by heavy metals (Ni, Cu, Zn and Cd) are approximately 10 times higher than those of acid forest soil. The neutral agricultural soil, polluted artificially by one pore volume (PV) of an HMs solution of concentration 200 mg L?1, can screen the leaching of these metals over several hundreds of years. The higher apparent desorption rate and per cent desorption of HMs (especially Cd) in acid forest soil indicated a higher potential of intensive migration of the metals across the profile and indicated potential risk of Cd pollution for this type of soil. The latest approach of artificial neural networks to describe transport of HMs in soil has been also evaluated. Using a simple three-layer perceptron topology with three hidden neurons, the experimental data could be simulated. The results suggested that the pH of soil is a major factor controlling the retention of the heavy metals in the soils. 相似文献
58.
Jana Balintová Medard Plucnara Pavlína Vidláková Dr. Radek Pohl Dr. Luděk Havran Prof. Dr. Miroslav Fojta Prof. Dr. Michal Hocek 《Chemistry (Weinheim an der Bergstrasse, Germany)》2013,19(38):12720-12731
Benzofurazane has been attached to nucleosides and dNTPs, either directly or through an acetylene linker, as a new redox label for electrochemical analysis of nucleotide sequences. Primer extension incorporation of the benzofurazane‐modified dNTPs by polymerases has been developed for the construction of labeled oligonucleotide probes. In combination with nitrophenyl and aminophenyl labels, we have successfully developed a three‐potential coding of DNA bases and have explored the relevant electrochemical potentials. The combination of benzofurazane and nitrophenyl reducible labels has proved to be excellent for ratiometric analysis of nucleotide sequences and is suitable for bioanalytical applications. 相似文献
59.
Piotr Cmoch Anna Korda Lucie Rárová Jana Oklešťková Miroslav Strnad Roman Luboradzki Zbigniew Pakulski 《Tetrahedron》2014
A concise synthesis of lupane triterpenes with an elongated carbon chain at the C-28 position, as well as saponins containing d-mannose, l-arabinose, and l-rhamnose moieties at the C-3 position is described. The overall synthesis of the new triterpenes involved seven linear steps starting from natural betulin: selective protection of a hydroxyl group, oxidation, elongation of the carbon chain by Grignard reaction, and deoxygenation. O-Glycosides were obtained by glycosylation of triterpenes with classical Schmidt's donors. Additionally, all new compounds were evaluated in vitro for their cytotoxic activities. Several triterpenes and the corresponding saponins exhibited an interesting cytotoxic activity profile against human cancer cell lines. The therapeutical index of active triterpenes is very high, since almost none of them were cytotoxic for normal BJ fibroblasts. These results open the way to the synthesis of various lupane-type saponin derivatives as potentially bioactive compounds. 相似文献
60.
The paper deals with the classical fiber bundle model with brittle Weibull fibers and equal load sharing. This model is significant for the strength of fibrous materials and composites, and the generally random strength of quasi-brittle structures. The model is also relevant for the analysis of the reliability of various parallel systems (computer components, infrastructure etc.). An improved closed-form Gaussian approximation of the standard deviation of bundle strength is presented and compared with accurate solution calculated by recursive formula proposed by Daniels. (© 2015 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim) 相似文献