Direct analysis in real time (DART) mass spectrometry of nucleotides and nucleosides: elucidation of a novel fragment [C<Subscript>5</Subscript>H<Subscript>5</Subscript>O]<Superscript>+</Superscript> and its in-source adducts

Direct analysis in real time (DART) mass spectrometry is a recently developed innovative technology, which has shown broad applications for fast and convenient analysis of complex samples. Due to the ease of sample preparation, we have recently initiated an investigation of the feasibility of detecting nucleotides and nucleosides using the DART-AccuTOF instrument, which we will refer to as the DART mass spectrometer. Our experimental results reveal that the ions representing the intact molecules of nucleotides are not detectable in either positive-ion or negative-ion mode. Instead, all four natural nucleotides fragment in the DART ion source, and a common fragment ion, [C₅H₅O]⁺ (1), is observed, which is probably formed via multiple-elimination reactions. Interestingly, 1 can form adducts with nucleobases in different molar ratios in the DART ion source. In contrast to nucleotides, the ions representing the intact molecules of nucleosides are detected in both positive-ion and negative-ion mode using DART mass spectrometry. Surprisingly, the fragmentation pattern of nucleosides is different from that of nucleotides in the DART ion source. In the cases of nucleosides (under positive-ion conditions), the production of 1 is not observed, indicating that the phosphate group plays an important role for the multiple eliminations observed in the spectra of nucleotides. The in-source reactions described in the present work show the complexity of the conditions in the DART ion source, and we hope that our results illustrate a better understanding about DART mass spectrometry.     

Pulse shape analysis to reduce the background of BEGe detectors

A simple technique for pulse shape discrimination in HPGe-detectors of the so-called BEGe type, based on just one parameter obtained from one signal read out, is presented here. This technique allows discriminating between pulses generated when the deposited energy is located within a small region of about 1 mm³ from the pulses generated when the energy is deposited at different locations several mm or cm apart. Two possible applications using this technique are: (i) experiments that look for neutrinoless double β decay in ⁷⁶Ge, such as GERDA; (ii) γ spectrometry measurements where the Compton continuum can be reduced and the efficiency for cascading γ-rays can remain high. With this active background reduction technique a Compton suppression factor of about 3 was obtained. The detector response may be influenced by the detector size. The detector used for this study had a diameter of 6 cm, a thickness of 2.6 cm and a relative efficiency of 19%. The results obtained with this detector were consistent with the results obtained by Budjá? et al. [J Instrum 4:10, 2009] with a 50% relative efficiency BEGe detector.     

Connections Between Classical and Generalised Trajectories of a State/Signal System

In our earlier article “Well-posed state/signal systems in continuous time”, we originally defined the notion of a trajectory of a state/signal system by means of a generating subspace. However, it was left as an open problem whether the generating subspace is uniquely determined by a given family of all generalised trajectories of a well-posed state/signal system. In this article we give a positive answer to this question and show how this insight simplifies some formulations in the theory of well-posed state/signal systems. The main contribution of the article is an explicit convolution scheme for constructing classical trajectories approximating an arbitrary generalised trajectory. We apply this scheme by studying relationships between classical and generalised trajectories of continuous-time state/signal systems under very weak assumptions. Among others, we show that there exists a space of classical trajectories that is invariant under differentiation and dense in the space of generalised trajectories. Some of our results generalise known results for strongly continuous semigroups and input/state/output systems, but we make no use of decompositions of the signal space into an input space and an output space, and in particular, none of our results depend on well-posedness.     

Quasi-steady model of the acoustic scattering properties of a T-junction

T-junctions are common elements in flow duct networks. It is shown that for low Strouhal numbers, based on the duct diameter, their acoustic scattering properties can be described using an incompressible quasi-steady model. Models are derived for systems subjected to combinations of grazing and bias mean flow, and are shown to work in both the limiting cases—that is, grazing or bias flow alone—as well as for the joining or dividing flow configurations. The upper Strouhal number for which the quasi-steady models are applicable is limited by flow-acoustic interaction effects, which differ significantly between the different flow configurations. Generally the models are applicable up to Strouhal numbers of approximately 0.1-0.2, which is comparable with previous published models for other configurations such as bends and orifices. This range is sufficient to make the model useful in many important engineering applications.     

Derivatization Procedures for Reducing Oligosaccharides,Part 3: Preparation of Oligosaccharide Glycosylamines,and Their Conversion Into Glycosaccharide - Acrylamide Copolymers

Abstract

Reducing oligosaccharides were converted in good yields into the corresponding primary glycosylamines by treatment with aqueous ammonium bicarbonate. The glycosylamines were then acryloylated and the obtained oligosaccharide N-acryloyl glycosylamines were copolymerized with acrylamide. High molecular weight, linear copolymers were obtained, which were useful as antigens in immunoassays.     

Density functional study for the polymerization of ethylene monomer using a new nickel catalyst

The present computational study was designed to study the polymerization of ethylene catalyzed by a new Ni‐based PymNox organometallic compound. Recently, we have synthesized and tested the behavior of this type of catalyst in olefin polymerization. It has been experimentally observed that the unsubstituted catalyst Ni2 (aldimino PymNox catalyst ) is less active than the methyl substituted Ni1 (acetaldimino PymNox catalyst ) analogue. The reactivity of both catalysts was examined using density functional theory (DFT) models. Our results indicate that the methyl substituted Ni1 introduces some additional steric hindrance that probably renders a more suitable catalyst conformation for the monomer incorporation. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 1160–1165, 2010     

Absolute Asymmetric Synthesis of a Tetrahedral Silver Complex

Even though the isolation of tetrahedral stereoisomers usually presents a synthetic challenge, a highly enantioenriched tetrahedral silver complex could be easily accessed by either crystallization or Viedma ripening. The overall preparation may be regarded as an example of absolute asymmetric synthesis. Experimental results indicate that both crystallization and Viedma ripening follow a similar cluster‐controlled mechanism.