Far‐ and Mid‐Infrared Spectroscopic Analysis of the Substrate‐Induced Structural Dynamics of Respiratory Complex I

The catalytic activity of the respiratory NADH:ubiquinone oxidoreductase (complex I) is based on conformational reorganizations. Herein we probe the effect of substrates on the conformational flexibility of complex I by means of ¹H/²H exchange kinetics at the level of the amide proton in the mid‐infrared spectral range (1700–1500 cm^?1). Slow, medium, and fast exchanging domains are distinguished that reveal different accessibilities to the solvent. Whereas amide hydrogens undergo rapid exchange with the solvent in an open structure, hydrogens experience much slower exchange when they are involved in H‐bonded structures or when they are sterically inaccessible for the solvent. The results indicate a structure that is more open in the presence of both NADH and quinon. Complementary information on the overall internal hydrogen bonding of the protein was probed in the far infrared (300–30 cm^?1), a spectral range that includes a continuum mode of the hydrogen bonding signature.     

NEW SEMISYNTHETIC CEPHALOSPORINS WITH ANTIBACTERIAL,ANTIVIRAL AND ANTIFUNGAL ACTIVITY

Abstract

The synthesis of new derivatives of thiazolidine 2-alkylidene-4-on-5-acetamidocephalosporanic acids or thiazolidine 2-arylidenazino-4-on-5-acetamidocephalosporanic acids and their salts of general formula (I) has been achieved.     

Multidimensional nano-HPLC coupled with tandem mass spectrometry for analyzing biotinylated proteins

Multidimensional high-performance liquid chromatography (HPLC) is a key method in shotgun proteomics approaches for analyzing highly complex protein mixtures by complementary chromatographic separation principles. Here, we describe an integrated 3D-nano-HPLC/nano-electrospray ionization quadrupole time-of-flight mass spectrometry system that allows an enzymatic digestion of proteins followed by an enrichment and subsequent separation of the created peptide mixtures. The online 3D-nano-HPLC system is composed of a monolithic trypsin reactor in the first dimension, a monolithic affinity column with immobilized monomeric avidin in the second dimension, and a reversed phase C18 HPLC-Chip in the third dimension that is coupled to a nano-ESI-Q-TOF mass spectrometer. The 3D-LC/MS setup is exemplified for the identification of biotinylated proteins from a simple protein mixture. Additionally, we describe an online 2D-nano-HPLC/nano-ESI-LTQ-Orbitrap-MS/MS setup for the enrichment, separation, and identification of cross-linked, biotinylated species from chemical cross-linking of cytochrome c and a calmodulin/peptide complex using a novel trifunctional cross-linker with two amine-reactive groups and a biotin label.

Easy Preparation of 1,3-Di-tert-Butylbenzene and Some Derivatives Thereof

1,3-Di-tert-butylbenzene (4) can conveniently be prepared from 1-bromo-3,5-di-tert-butylbenzene (2) which, in turn, is obtained from the easily available 1,3,5-tri-tert-butylbenzene (1). The use of 4 is illustrated by the preparation of the arylphosphines 6 and 7.     

Molecular dynamics and conformational behaviour of mesogenic resorcinarenes

The dynamic and conformational behaviour of four mesogenic resorcinarenes exhibiting columnar mesophases have been studied by a combination of broadband dielectric spectroscopy and deuterium solid state NMR. Broadband dielectric spectroscopy provided evidence for two relaxation processes present both in the mesophase and in the isotropic liquid. The high frequency process II, common to all mesogens, has been assigned to the libration of the carbonyl groups of the ester junctions between the core and the side chains. The low frequency process I, present in conformationally mobile mesogens 1 and 2, has been attributed to the ring inversion process of the macrocyclic core associated with dipole inversion along the columnar axis. Deuterium solid state NMR performed on 4, the deuteriated analogue of 1, confirmed the molecular dynamics attribution for process I, assigning the ring inversion to the interconversion of the two equivalent crown conformations.