Effects of phosphatidylserine and phosphatidylethanolamine content on partitioning of triflupromazine and chlorpromazine between phosphatidylcholine-aminophospholipid bilayer vesicles and water studied by second-derivative spectrophotometry

To assess the affinity of psychotropic phenothiazine drugs, triflupromazine (TFZ) and chlorpromazine (CPZ), for the membranes of central nervous system and the other organs in the body, the partition coefficients (Kps) of these drugs to phosphatidylcholine (PC)-phosphatidylserine (PS) and PC-phosphatidylethanolamine (PE) small and large unilamellar vesicles (SUV, LUV) were examined by a second-derivative spectrophotometric method, since PS is abundantly contained in the membranes of the central nervous system and PE is distributed widely in the membranes of the organs in the body. Size and preparation methods of the vesicles did not affect the Kp values at each aminophospholipid content suggesting that the partition of the phenothiazine drugs was not affected by the structural differences in the vesicles such as their curvature or asymmetric distribution of the phospholipids between the outer and inner layers of the bilayer membranes. However, the Kp values of both drugs increased remarkably according to the PS content in the bilayer membranes, i.e., the Kp values for the vesicles of 30 mol% PS content were about 3 times of that for the vesicles of PC alone, while both Kp values slightly reduced with the increase in the content of PE in the bilayer membranes of PC-PE vesicles. The results indicate that both drugs have higher affinity for the PC-PS bilayer membranes than for the PC and PC-PE membranes, which can offer an evidence for the fact that TFZ and CPZ are predominantly distributed and accumulated in the brain and nerve cell membranes that contain PS abundantly.     

Relationship of stereochemical and skeletal diversity of small molecules to cellular measurement space

Systematic and quantitative measurements of the roles of stereochemistry and skeleton-dependent conformational restriction were made using multidimensional screening. We first used diversity-oriented synthesis to synthesize the same number (122) of [10.4.0] bicyclic products (B) and their corresponding monocyclic precursors (M). We measured the ability of these compounds to modulate a broad swath of biology using 40 parallel cell-based assays. We analyzed the results using statistical methods that revealed illuminating relationships between stereochemistry, ring number, and assay outcomes. Conformational restriction by ring-closing metathesis increased the specificity of responses among active compounds and was the dominant factor in global activity patterns. Hierarchical clustering also revealed that stereochemistry was a second dominant factor; whereas the stereochemistry of macrocyclic appendages was a determinant for bicyclic compounds, the stereochemistry of the carbohydrates was a determinant for the monocyclic compounds of global activity patterns. These studies illustrate a quantitative method for measuring stereochemical and skeletal diversity of small molecules and their cellular consequences.     

Total synthesis of (+--oudemansin

($\text{+}\text{-}$)-Oudemansin has been synthesized starting from $\text{trans}$-cinnamaldehyde by a route involving the stereoselective Zn(BH₄)₂ reduction of β-keto ester.     

Heterodimerization of dye-modified cyclodextrins with native cyclodextrins

The heterodimerization behavior of dye-modified beta-cyclodextrins (1-6) with native cyclodextrins (CDs) was investigated by means of absorption and induced circular dichroism spectroscopy in an aqueous solution. Three types of azo dye-modified beta-CDs (1-3) show different association behaviors, depending on the positional difference and the electronic character of substituent connected to the CD unit in the dye moiety. p-Methyl red-modified beta-CD (1), which has a 4-(dimethylamino)azobenzene moiety connected to the CD unit at the 4' position by an amido linkage, forms an intramolecular self-complex, inserting the dye moiety in its beta-CD cavity. It also associates with the native alpha-CD by inserting the moiety of 1 into the alpha-CD cavity. The association constants for such heterodimerization are 198 M(-1) at pH 1.00 and 305 M(-1) at pH 6.59, which are larger than the association constant of 1 for beta-CD (43 M(-1) at pH 1.00). Methyl red-modified 2, which has the same dye moiety as that for 1 although its substituent position is different from that of 1, does not associate even with alpha-CD due to the stable self-intramolecular complex, in which the dye moiety is deeply included in its own cavity of beta-CD. Alizarin yellow-modified CD (3), which has an azo dye moiety different from that of 1 and 2, caused a slight spectral variation upon addition of alpha-CD, suggesting that the interaction between 3 and alpha-CD is weak. On the other hand, phenolphthalein-modified beta-CD (4), which forms an intermolecular association complex in its higher concentrations, binds with beta-CD with an association constant of 787 M(-1) at pH 10.80, where 4 exists as the dianion monomer in the absence of beta-CD. p-Nitorophenol-modified beta-CDs (5 and 6), each having p-nitorophenol moieties with a different connecting part with an amido and amidophenyl group, respectively, associated with alpha-CD with association constants of 66 and 16 M(-1) for 5 and 6, respectively. The phenyl unit in the connecting part of 6 may prevent the smooth binding with alpha-CD. All these results suggest that the dye-modified CDs, in which the dye part is not tightly included in its CD cavity, associate with the native CD to form heterodimer composed of two different CD units by inserting the dye moiety into the native CD unit. The resulting heterodimers have a cavity that can bind another appending moiety of host molecules. On this basis, more ordered molecular arrays or the supramolecular hereropolymers can be constructed.     

Synthesis and properties of Zr-Co heterodinuclear complexes with a bridging bis(cyclopentadienyl) ligand

[(η⁵-C₅H₅)ZrCl₂(η⁵-C₅H₄)CMe₂(C₅H₅)] reacted with Co₂(CO)₈ to produce a heterodinuclear Zr(IV)-Co(I) complex [(η⁵-C₅H₅)ZrCl₂(η⁵-C₅H₄)CMe₂(η⁵-C₅H₄)Co(CO)₂] (3). Complex 3 underwent oxidative addition of I₂ to give [(η⁵-C₅H₅)ZrCl₂(η⁵-C₅H₄)CMe₂(η⁵-C₅H₄)CoI₂(CO)] (4) having Zr(IV) and Co(III) centers. The carbonyl ligand of 4 was easily replaced with P(OMe)₃ and PPh₃ to afford [(η⁵-C₅H₅)ZrCl₂(η⁵-C₅H₄)CMe₂(η⁵-C₅H₄)CoI₂(L)] (5: L = P(OMe)₃, 6: L = PPh₃). Structures of 5 and 6 were determined by X-ray crystallography. These Zr-Co heterodinuclear complexes catalyzed polymerization of ethylene and propylene.     

Nanostructured liquid-crystalline Li-ion conductors with high oxidation resistance: molecular design strategy towards safe and high-voltage-operation Li-ion batteries

Nanostructured, uncharged liquid-crystalline (LC) electrolyte molecules having bicyclohexyl and cyclic carbonate moieties have been developed for application in Li-ion batteries as quasi-solid electrolytes, which suppress leakage and combustion. Towards the development of safe and high performance Li-ion batteries, we have designed Li-ion conductive LC materials with high oxidation resistance using density functional theory (DFT) calculation. The DFT calculation suggests that a mesogen with a bicyclohexyl moiety is suitable for the high-oxidation-resistance LC electrolytes compared to a mesogen containing phenylene moieties. A tri(oxyethylene) chain introduced between the cyclic carbonate and the bicyclohexyl moiety in the core part tunes the viscosity and the miscibility with Li salts. The designed Li-ion conductive LC molecules exhibit smectic LC phases over a wide temperature range, and they are miscible with added lithium bis(trifluoromethanesulfonyl)imide (LiTFSI) salt up to 5 : 5 in molar ratio in their smectic phases. The resulting LC mixtures with LiTFSI show oxidation resistance above 4.0 V vs. Li/Li⁺ in cyclic voltammetry measurements. The enhanced oxidation resistance improves the performance of Li half-cells containing LC electrolytes.

Ion-conductive liquid-crystalline molecules with high-oxidation resistance, which were designed with density functional theory calculation, improved charge–discharge reactions in Li-ion batteries.     

A STUDY OF AQUEOUS SOLUTIONS OF NUCLEIC ACID CONSTITUENTS EXPOSED TO MONOCHROMATIC 160 nm VACUUM-UV LIGHT BY SPIN-TRAPPING METHOD

Spin-trapping technique was employed to detect and identify free radical intermediates produced in aqueous solutions of nucleic acid constituents (pyrimidine bases and pyrimidine nucleosides) after irradiation by monochromatic 160 nm vacuum-UV light from the electron storage ring. Short-lived free radicals produced in the molecules were converted into relatively long-lived free radicals (spin-adducts) by the reaction with MNP used as a spin trap. The resulting nitroxide radicals were subsequently analysed by esr.
The esr measurements were made after irradiating H₂O solution containing sample and the spin trap and once freeze-drying it and re-dissolving the residual powder in D₂O to get the spectrum with a well-resolved hyperfine structure. Thus, clear evidence that most of the radicals were not formed by H-addition but formed by OH-addition at the C5 position of the 5, 6 double bond were obtained for pyrimidine bases. For pyrimidine nucleosides, although the effect of H₂O-D₂O exchange was not recognized on resolution improvement of the hyperfine structure of the esr spectra, careful analysis of the hyperfine structure made it possible to identify the radical structures; OH-addition radicals at the C6 of the double bond of the base moiety in addition to the OH-addition radicals at the C5 position for all except for 2-deoxycytidine. Evidence for the formation of free radicals at the sugar moiety was not clear.     

Gomadalactones A, B, and C: novel 3-oxabicyclo[3.3.0]octane compounds in the contact sex pheromone of the white-spotted longicorn beetle, Anoplophora malasiaca

The ether extract of the females of white-spotted longicorn beetle Anoplophora malasiaca showed activity as contact sex pheromone to males. The extract was fractionated, and a pheromonal activity was revealed only when three fractions; n-hexane, n-hexane/EtOAc 9:1, and EtOAc were blended. The relative structures of gomadalactone A, B, and C, three active components isolated from the EtOAc fraction, were determined by spectroscopic studies to be (1S^∗,4R^∗,5S^∗)-5-hydroxy-4-[(E)-7-hydroxy-4-methylhept-3-enyl]-4,8-dimethyl-3-oxabicyclo[3.3.0]octan-7-en-2,6-dione, (1R^∗,4R^∗,5R^∗)-5-hydroxy-4-[(E)-7-hydroxy-4-methylhept-3-enyl]-4,8-dimethyl-3-oxabicyclo[3.3.0]octan-7-en-2,6-dione, and (1S^∗,4R^∗,5S^∗,8S^∗)-5-hydroxy-4-[(E)-7-hydroxy-4-methylhept-3-enyl]-4,8-dimethyl-3-oxabicyclo[3.3.0]octan-2,6-dione, respectively.     

Analysis of the conserved P9-G10.1 metal-binding motif in hammerhead ribozymes with an extra nucleotide inserted between A9 and G10.1 residues

Hammerhead ribozymes (Rz) have catalytically important tandem G:A pairs in the core region, and we recently demonstrated that the P9-G10.1 motif (a sheared-type G:A pair with a guanine residue on the 3' side of the adenine residue) with several flanking base pairs is sufficient for capture of divalent cations, such as Mg(2+) and Cd(2+) ions that are important to maintain full activities (Tanaka et al. J. Am. Chem. Soc. 2002, 124, 4595-4601; Tanaka et al. J. Am. Chem. Soc. 2004, 126, 744-752). We also found that mutant hammerhead ribozymes that have an additional G residue inserted between A9 and G10.1 residues (the metal-binding P9-G10.1 motif) have significant catalytic activities. In this study, we demonstrate that the hammerhead ribozymes are capable of maintaining the catalytically competent structure even when the tandem, sheared-type G:A pairs were perturbed by an insertion of an additional nucleotide, whereas the chirality of the phosphorothioate at the P9 position significantly influenced the enzymatic activity for both the natural and G-inserted ribozymes.     

Shift of Optical Absorption Edge in Sol-Gel Derived Transparent BaTiO3 Gels During Aging

Transparent barium titanate (BaTiO₃) wet gels synthesized by sol-gel processing using high-concentration Ba,Ti-alkoxide solution (1.0 mol/l) were subjected to optical measurements, X-ray diffraction analysis and transmission electron microscope observations. A systematic shift of the optical absorption edge was observed for the transparent BaTiO₃ wet gels shrinking during aging at 30 and 50°C, while no shift was observed for the wet gels aged at 5°C. The crystallinity and crystallite size of the gels increased with increasing aging time and temperature. The shift of the optical absorption edge of the BaTiO₃ gels during aging was found to have a close relation to an increase in the crystallite size of the gels.