SPIN-TRAPPING and ESR STUDIES OF THE DIRECT PHOTOLYSIS OF AROMATIC AMINO ACIDS, DIPEPTIDES, TRIPEPTIDES and POLYPEPTIDES IN AQUEOUS SOLUTIONS—III. TRYPTOPHAN and RELATED COMPOUNDS

Abstract— The UV photolysis of tryptophan (Trp) and Trp-containing peptides in aerated aqueous solutions has been studied by ESR and spin-trapping techniques using f-nitrosobutane as the spin-trap. The photolysis of Trp alone at 290 nm gave rise to the addition of the spin-trap to carbon 3 of the indole ring. A large ESR signal from the hydronitroxide spin-adduct was also observed revealing the formation of hydrated electrons. Generally, the photolysis of Trp-containing dipeptides generated the deamination radical of the N-terminal amino acid followed by addition to the spin-trap. In the case of lysyl-Trp, a deamination radical from the side chain of lysine was proposed. A sensitization experiment with Trp as sensitizer and glycine (Gly) as substrate led to the generation of the deamination radical of Gly. Most of the observed free radicals resulting from the photolysis of Trp-containing peptides can be explained in terms of hydrated electrons reacting with the carbonyl group followed by deamination of the N-terminus.     

Lax-type isospectral deformations on nilmanifolds

A one-parameter familyg(t) (0 t T) of Riemannian metric on a compact manifold is called an isospectral deformation of a metricg(0) if the Laplace-Beltrami operators associated to the metricsg(t) have the same spectra. Examples of non-trivial isospectral deformations were constructed on solvmanifolds for the first time by C.S. Gordon and E. Wilson on the basis of Kirillov theory. This paper considers the isospectral deformations on nilmanifolds from the dynamical point of view. First, we see for certain isospectral deformations that the associated Hamiltonian systems of geodesic flows are decomposed into a collection of reduced systems which are left invariant as Hamiltonian systems under the deformations. This fact is formulated by the classical Lax equations. Next, by using a quantization procedure, we attempt to obtain Lax equations for the reduced Laplacians from the classical Lax equations. As a result, we show that certain isospectral deformations by Gordon-Wilson are represented by the Lax equations.     

Self-assembly of active IrO2 colloid catalyst on an ITO electrode for efficient electrochemical water oxidation

Active catalysts for water oxidation to evolve O(2) are required for the construction of artificial photosynthetic devices that are expected to be promising energy-providing systems in the future. The citrate-stabilized IrO(2) colloid was self-assembled onto an indium tin oxide (ITO) electrode to form a monolayer of the colloidal IrO(2) particles when it was dipped in the colloid solution. The self-assembly could be achieved by a chemical interaction between carboxylate groups on the citrate stabilizer and hydroxyl groups on the ITO surface to form ester bonds. Efficient electrocatalysis for water oxidation was demonstrated using the electrode modified by the self-assembled IrO(2) colloid to yield the highest turnover frequency ((2.3-2.5) x 10(4) h(-1)) of IrO(2) in the hitherto-reported catalysts for electrochemical water oxidation.     

Organic-inorganic hybrids from renewable plant oils and clay

This study deals with the preparation and properties of a new class of organic-inorganic hybrids from renewable resources. The hybrids were synthesized by an acid-catalyzed curing of epoxidized triglycerides in the presence of an organophilic montmorillonite (a modified clay). The mechanical properties were improved by the incorporation of clay in the oil-based polymer matrix. The reinforcement effect due to the addition of clay was confirmed by dynamic viscoelasticity analysis. The hybrids showed relatively high thermal stability. The co-curing of epoxidized soybean and linseed oils in the presence of clay produced hybrids with controlled mechanical and coating properties. The barrier property of the hybrid towards water vapor was superior to that of the oil polymer. The development of the present hybrids consisting of inexpensive renewable resources, triglyceride and clay is expected to contribute to global sustainability.     

Resonance energy transfer from dibucaine to acriflavine in polystyrene latex dispersions

Resonance energy transfer from dibucaine (DC) to acriflavine (AF) has been investigated both in homogeneous aqueous solutions and in polystyrene latex dispersions. The energy transfer reaction is observed by monitoring fluorescence quenching of DC as well as sensitized emission of AF. It is found that the energy transfer from DC to AF is remarkably enhanced on going from the aqueous homogeneous solution to the latex dispersion. This is mainly attributed to the fact that both the donor and acceptor are effectively adsorbed onto the latex particles, as evidenced by the measurement of adsorption isotherms. From the adsorption experiments, it is also elucidated that electrostatic interaction is significant at low DC concentration, while hydrophobic interaction dominates at the higher concentration especially at higher pH.     

A reappraisal,based on (31)P NMR,of the direct coordination of a metal ion with the phosphoryl oxygen at the cleavage site of a hammerhead ribozyme

It has been generally accepted, on the basis of kinetic studies with phosphorothioate-containing substrates and analyses by NMR spectroscopy, that a divalent metal ion interacts directly with the pro-Rp oxygen at the cleavage site in reactions catalyzed by hammerhead ribozymes. However, results of our recent kinetic studies (Zhou, D.-M.; Kumar, P. K. R.; Zhang. L. H.; Taira, K. J. Am. Chem. Soc. 1996, 118, 8969-8970. Yoshinari, K.; Taira, K. Nucleic Acids Res. 2000, 28, 1730-1742) demonstrated that a Cd(2+) ion does not interact with the sulfur atom at the Rp position of the scissile phosphate (P1.1) in the ground state or in the transition state. Therefore, in the present study, we attempted to determine by (31)P NMR spectroscopy whether a Cd(2+) ion binds to the P1.1 phosphorothioate at the cleavage site in solution. In the case of the R32-S11S (ribozyme-substrate) complex, neither the Rp- nor the Sp-phosphorothioate signal from the S11S substrate at the cleavage site was perturbed (the change was less than 0.1 ppm) upon the addition of Cd(2+) ions (19 equiv) at pH 5.9 and 8.5. By contrast, we detected the significant perturbation of the P9 phosphorothioate signal from another known metal-binding site (the A9/G10.1 metal-binding motif). The Rp-phosphorothioate signal from A9/G10.1 was shifted by about 10 ppm in the higher field direction upon the addition of Cd(2+) ions. These observations support the results of our kinetic analysis and indicate that a Cd(2+) ion interacts with the sulfur atom of the phosphorothioate at the A9/G10.1 site (P9) but that a Cd(2+) ion does not interact with the sulfur atom at the Rp- or at the Sp-position of the scissile phosphate (P1.1) in the ground state.     

Flow injection extraction chromatography with ICP-MS for thorium and uranium determination in human body fluids

A method based on flow injection extraction chromatography coupled to on-line ICP-MS (FI-EXC-ICPMS) has been developed and validated for simultaneous thorium and uranium determination in human body fluids. By using extraction chromatography, the limits of detection achieved for ²³²Th, ²³⁵U and ²³⁸U were 0.06 ng^.l^-1, 0.0014 ng^.l^-1 and 0.05 ng^.l^-1, respectively. The accuracy of the FI-EXC-ICPMS method was 102.4% and 101.5% with overall precision (RSD_max at 95% CI) of 5.3% and 4.9% for ²³²Th and ²³⁸U, respectively. The ²³⁵U/²³⁸U atom ratio is measured with 1.8% precision. The technique was employed for simultaneous thorium and uranium analyses in human urine and blood samples after microwave digestion. This revised version was published online in July 2006 with corrections to the Cover Date.     

Four (E,Z,E)‐1‐(4‐alkoxy­phen­yl)‐6‐(4‐nitro­phen­yl)hexa‐1,3,5‐trienes

The crystal structures of the four E,Z,E isomers of 1‐(4‐alk­oxy­phen­yl)‐6‐(4‐nitro­phen­yl)hexa‐1,3,5‐triene, namely (E,Z,E)‐1‐(4‐methoxy­phen­yl)‐6‐(4‐nitro­phen­yl)hexa‐1,3,5‐triene, C₁₉H₁₇NO₃, (E,Z,E)‐1‐(4‐ethoxy­phen­yl)‐6‐(4‐nitro­phen­yl)hexa‐1,3,5‐triene, C₂₀H₁₉NO₃, (E,Z,E)‐1‐(4‐nitro­phen­yl)‐6‐(4‐n‐propoxyphen­yl)hexa‐1,3,5‐triene, C₂₁H₂₁NO₃, and (E,Z,E)‐1‐(4‐n‐butoxy­phen­yl)‐6‐(4‐nitro­phen­yl)hexa‐1,3,5‐triene, C₂₂H₂₃NO₃, have been determined. Inter­molecular N⋯O dipole inter­actions between the nitro groups are observed for the meth­oxy derivative, while for the eth­oxy derivative, two adjacent mol­ecules are linked at both ends through N⋯O dipole–dipole inter­actions between the N atom of the nitro group and the O atom of the eth­oxy group to form a supra­molecular ring‐like structure. In the crystal structures of the n‐prop­oxy and n‐but­oxy derivatives, the shortest inter­molecular distances are those between the two O atoms of the alk­oxy groups. Thus, the nearest two mol­ecules form an S‐shaped supra­molecular dimer in these crystal structures.     

Kinetics of crosslinking reactions. 1. Reaction rate of intramolecular crosslinkings by using a soluble microgel

Soluble microgels with several pendant vinyl groups were synthesized by radical copolymerization of methyl methacrylate (MMA) with p-divinyl benzene (p-DVB). The polymerization conditions used for intramolecular crosslinking of microgels were chosen from gel permeation chromatograph (GPC) measurements of the reaction products. The rate constant of intramolecular crosslinking (k_pⁱ) was estimated from the changes in the concentration of pendant vinyl groups of microgel by using photometrical measurements at 30°C assuming a unimolecular termination mechanism of polymer radicals. As a result, k_pⁱ showed larger values than k_p of styrene and depended strongly on the internal structure of the microgels.     

Syringe-cartridge solid-phase extraction method for patulin in apple juice

A syringe-cartridge solid-phase extraction (SPE) method was developed for determination of patulin in apple juice. A 2.5 mL portion of test sample was passed through a conditioned macroporous SPE cartridge and washed with 2 mL 1% sodium bicarbonate followed by 2 mL 1% acetic acid. Patulin was eluted with 1 mL 10% ethyl acetate in ethyl ether and determined by reversed-phase liquid chromatography using a mobile phase consisting of 81% acetonitrile, 9% water, and 10% 0.05M potassium phosphate buffer, pH 2.4. Recoveries averaged 92% and the relative standard deviation was 8.0% in test samples spiked with 50 ng/mL patulin. The method appears to be applicable for monitoring apple juice samples to meet the U.S. Food and Drug Administration compliance action level of 50 microg/kg in an industrial quality assurance laboratory environment.