Structure and stability of Ne+He(n): experiment and diffusion quantum Monte Carlo theory with "on the fly" electronic structure

New data are reported for the mass-spectrometry fragmentation patterns of helium clusters, either pure or containing a Ne or an Ar atom. The patterns for He(n)+ and Ar+He(n) show clear evidence of structure, while those of Ne+He(n) do not. To better understand the surprising result for the Ne+He(n) fragments, diffusion quantum Monte Carlo (DMC) calculations of the energies and structural properties of these ions were performed using a diatomics-in-molecule (DIM) parametrization of the potential energy. Using DIM for electronic energy evaluation allows us to sample 10(9) configurations even for a cluster as large as Ne+He14. The results of the DMC calculation are very surprising. For n > 7, the DMC random walkers rarely venture within 100 cm(-1) of the minimum potential energy. Analysis of the resulting particle density distributions shows that the zero-point energy does more than spread the wave function around the potential-energy minima, resulting in very diffuse wave functions. For some of the clusters the quantum effects nearly exclude the region of the potential minimum from the overall wave function. An important result of this effect is that the incremental bonding energy of the nth helium atom varies quite smoothly with n, for n > 5. This eliminates the expected shell structure and explains the lack of magic-number-type features in the data.     

Synthesis of AX7593, a quinazoline-derived photoaffinity probe for EGFR

[structure: see text] The synthesis of a photoaffinity probe for EGFR is described. O-Alkylation of 4-(meta-azidoanilino)-6-methoxy-7-hydroxy-quinazoline with a protected tetraethyleneglycol linker followed by the attachment of tetramethylrhodamine yielded the fluorescent probe AX7593. Photoaffinity labeling of EGFR by AX7593 (K(b) = 280 nM) was shown to have an efficiency of 34% and to be competitive with the EGFR inhibitors PP2 and AG1478.     

Iron-Semiquinone, Semiquinone-Semiquinone, and Iron-Iron Magnetic Exchange in Monomeric and Dimeric Ferric Complexes Containing the 3,6-Di-tert-butyl-1,2-semiquinonate Ligand

Fe(3,6-DBSQ)(3) has been prepared by reacting 3,6-di-tert-butyl-1,2-benzoquinone with Fe(CO)(5). The complex has been characterized structurally [orthorhombic, Pbca, a = 18.277(5) ?, b = 11.634(3) ?, c = 39.903(10) ?, V = 8485(4) ?(3), Z = 8, R = 0.063], electrochemically, and magnetically. Ligand-based redox couples are observed in electrochemical experiments that consist of reversible or quasireversible Cat/SQ steps at negative potentials and irreversible SQ/BQ oxidations at positive potentials. Magnetic measurements show temperature dependence that arises from antiferromagnetic exchange. Data have been fit to an expression that includes the effects of both Fe-SQ and SQ-SQ exchange with the result that J(SQ-SQ) is larger in magnitude than J(Fe-SQ). In methanol, the complex undergoes solvolysis to form [Fe(3,6-DBSQ)(2)(&mgr;-OMe)](2). Structural characterization [triclinic, P&onemacr;, a = 11.441(2) ?, b = 11.514(2) ?, c = 14.552(2) ?, alpha = 67.86(1) degrees, beta = 70.51(1) degrees, gamma = 72.79(1) degrees, V = 1641.8(5) ?(3), Z = 1, R = 0.048] has shown that the molecule is a centrosymmetric dimer with no close intermolecular contacts. The temperature dependence of magnetic measurements has been fit to a model consisting of two interacting S = (3)/(2) centers that arise from strong Fe-SQ exchange with J(Fe-Fe) = -22.4 cm(-1).     

A comparison of the AMBER*, OPLSAA and HF potential energy surfaces for a series of diastereomeric cyclic urea HIV-1 inhibitors

The LM:MC conformational search method was used to identify the low energy structures on the OPLS-AA/GBSA(water) and AMBER*/GBSA(water) surfaces for a diastereomeric series of cyclic urea molecules that have been shown to be potent inhibitors of the HIV-1 protease enzyme. The lowest energy structures from each search were then subjected to geometry optimization and frequency analysis using the HF/6-311G** method in conjunction with the self-consistent reaction field (SCRF) treatment for water. A comparison of the diastereomeric energies and structures indicates that the OPLSAA/GBSA(water) surface is in good agreement with the HF/6-311G**/SCRF(water) surface.     

Characterization of steric and electronic properties of NiN2S2 complexes as S-donor metallodithiolate ligands

The physical properties and structures of a series of six complexes of the type (NiN(2)S(2))W(CO)(4) have been used to establish electronic and steric parameters for square planar NiN(2)S(2) complexes as bidentate, S-donor ligands. According to the nu(CO) stretching frequencies and associated computed Cotton-Kraihanzel force constants of the tungsten carbonyl adducts, there is little difference in donor abilities of the five neutral NiN(2)S(2) metallodithiolate ligands in the series. The dianionic Ni(ema)(2)(-) (ema = N,N'-ethylenebis(2-mercaptoacetamide)) complex transfers more electron density onto the W(CO)(4) moiety. A ranking of donor abilities and a comparison with classical bidentate ligands is as follows: Ni(ema)(=) > {[NiN(2)S(2)](0)} > bipy approximately phen > Ph(2)PCH(2)CH(2)PPh(2) > Ph(2)PCH(2)PPh(2). Electrochemical data from cyclic voltammetry find that the reduction event in the (NiN(2)S(2))W(CO)(4) derivatives is shifted to more positive potentials by ca. 0.5 V compared to the ca. -2 V Ni(II/I) redox event in the free NiN(2)S(2) ligand, consistent with the electron drain from the nickel-dithiolate ligands by the W(CO)(4) acceptor. Differences in Ni(II/I) DeltaE(1/2) values appear to have a ligand dependence which is related to a structural feature of the hinge angle imposed by the (mu-SR)(2) bridges. Thus the angle formed by the intersection of NiN(2)S(2)/WS(2)C(2) planes has been established by X-ray diffraction analyses as a unique orientational feature of the nickel-dithiolate ligands in contrast to classical diphosphine or diimine ligands and ranges in value from 136 to 107 degrees . Variable-temperature (13)C NMR studies show that the spatial orientations of the ligands remained fixed with respect to the W(CO)(4) moiety to temperatures of 100 degrees C.     

New addresses on an addressable virus nanoblock; uniquely reactive Lys residues on cowpea mosaic virus

Cowpea mosaic virus (CPMV) is a robust, icosahedrally symmetric platform successfully used for attaching a variety of molecular substrates including proteins, fluorescent labels, and metals. The symmetric distribution and high local concentration of the attached molecules generates novel properties for the 30 nm particles. We report new CPMV reagent particles generated by systematic replacement of surface lysines with arginine residues. The relative reactivity of each lysine on the native particle was determined, and the two most reactive lysine residues were then created as single attachment sites by replacing all other lysines with arginine residues. Structural analysis of gold derivatization not only corroborated the specific reactivity of these unique lysine residues but also demonstrated their dramatically different presentation environment. Combined with site-directed cystine mutations, it is now possible to uniquely double label CPMV, expanding its use as an addressable nanoblock.     

Preparation and reactivity of O2-sulfonated diazeniumdiolates

We report the facile preparation of O2-sulfonated diazeniumdiolates and mechanistic investigation of their reactions with representative nucleophiles. This new class of compounds extends the range of O2-substituted diazeniumdiolates available for potential applications in research and medicine.     

Hydrothermal Synthesis of Rare Earth Iodates from the Corresponding Periodates: II1). Synthesis and Structures of Ln(IO3)3 (Ln = Pr,Nd, Sm,Eu, Gd,Tb, Ho,Er) and Ln(IO3)3 · 2H2O (Ln = Eu,Gd, Dy,Er, Tm,Yb)

Single crystals of lanthanide iodates have been quickly grown by decomposition of the corresponding periodates under hydrothermal conditions. Single crystal X‐ray diffraction showed that two structure types form with the elements from Pr‐Yb, an anhydrous form for Pr, Nd, Sm, Eu, Gd, Tb, Ho, Er and a dihydrate for Eu, Gd, Dy, Er, Tm, Yb. A detailed structure study is presented for one representative of each of these types, along with structure type and lattice parameters for the other materials. Tb(IO₃)₃: Space group P2₁/c, Z = 4, lattice dimensions at 120 K: a = 7.102(1), b = 8.468(1), c = 13.355(2)Å, β = 99.67(1)°; R1 = 0.034. Yb(IO₃)₃ · 2H₂O: Space group P1¯, Z = 2, lattice dimensions at 120 K: a = 7.013(1), b = 7.370(1), c = 10.458(2)Å, α = 95.250(5), β = 105.096(5), γ = 109.910(10)°; R1 = 0.024.     

Chiral cyclodextrin-modified microemulsion electrokinetic chromatography

Cyclodextrin (CD)-modified microemulsion electrokinetic chromatography (MEEKC) or CD-MEEKC has not previously been applied to the area of chiral separations. Herein, the results of investigations of various microemulsions with CD additives are presented. Two different microemulsions are explored: an ethyl acetate sodium dodecyl sulfate microemulsion, and a chiral dodecoxycarbonylvaline (DDCV) microemulsion. Each microemulsion is paired separately with a neutral CD (hydroxypropyl-beta-CD) and an anionic CD (sulfated-beta-CD). In addition, the chiral DDCV microemulsion is investigated in both the R- and S- form. By varying simple parameters such as buffer system, applied voltage, surfactant enantiomer, and type of cyclodextrin, dramatic improvements in the chiral separations were noted. Resolution was found to be highly dependent on buffer identity and concentration, and somewhat dependent on whether the CDs used were randomly or highly sulfated. Under optimized conditions, the resolution ranged from 0.8 to 4.8, with plate counts ranging from 4000 to 26 000. Additionally, S- and R-levetiracetam, which had never before been enantioseparated via capillary electrophoresis (CE) methodologies, were separated in less than 8 min, with a resolution of 1.1.     

Catalytic,three-component assembly reaction for the synthesis of pyrrolidines

[reaction: see text] Copper(I) salts catalyze the three-component assembly reaction between an alpha-diazo ester, an imine, and various alkenes and alkynes to form substituted pyrrolidines with excellent to good diastereoselectivities in high yields. The transition metal-catalyzed decomposition of the alpha-diazo compound in the presence of the imine likely generates a transient azomethine ylid that undergoes addition with various dipolarophiles in a highly convergent manner.