Fragmentation pathways of deprotonated ortho-hydroxybenzyl alcohol

The ortho, meta, and para isomers of hydroxybenzyl alcohol can be unequivocally distinguished by the collision-induced dissociation mass spectra of their anions. The presence of a prominent peak at m/z 121 for an elimination of a dihydrogen molecule renders the ortho-isomer spectrum markedly different from those of its meta and para congeners. Investigations carried out with deuterium-labeled isotopologues of the ortho isomer verified that the labile hydrogen atom on the hydroxyl group and one of the benzylic hydrogen atoms are specifically removed in the formation of the m/z 121 ion. The ortho-isomer spectrum also showed a prominent peak at m/z 93. Experimental data indicated that the m/z 93 product ion originates either from a two-step H₂and CO elimination mechanism or from a direct loss of a HCHO molecule from the precursor anion. The intensity ratio of the m/z 93 and 94 peaks in the spectrum recorded from the m/z 124 ion generated from a sample of o-hydroxybenzyl alcohol dissolved in D₂O supported the notion that the direct HCHO loss is the more dominant pathway for the generation of the phenolate ion under low activation conditions. In contrast, the two-step mechanism becomes the more dominant pathway under high collisional activation conditions. The spectrum also showed a weak peak at m/z 105 for a water loss. Based on computational data, the m/z 105 ion generated in this way appears to be a composite generated from a common ion-neutral complex intermediate in which a hydroxyl anion is positioned equidistantly between one of the benzylic hydrogens and a nearby hydrogen atom of the benzene ring. Upon activation, the complex dissociates to form either a phenide or a quinone methide anion. The reaction forming a carbon dioxide adduct under ion-mobility conditions was used to support the proposed water-loss mechanism.     

Standardization and validation of phytometabolites by UHPLC and high-performance thin layer chromatography for rapid quality assessment of ancient ayurvedic medicine,Mahayograj Guggul

Mahayograj Guggul is an ancient ayurvedic medicine, prescribed for various joint disorders like arthritis, gout, and rheumatism. The present research was envisaged to develop a simple, sensitive, and comprehensive analytical method for standardization of Mahayograj Guggul. The analysis was conducted for gallic acid, protocatechuic acid, vanillic acid, cinnamic acid, piperine, guggulsterone-E, and guggulsterone-Z by high-performance thin-layer chromatography, and additionally ferulic acid, ellagic acid, and picroside I by ultra high-performance liquid chromatography. These developed methods were validated as per international guidelines, and were found linear (r² > 0.99), sensitive, precise (relative standard deviation < 5%), and accurate with recovery values (85–105%). The limit of detection and quantification were in the range of 0.11–23.6 and 0.33–71.51 μg/g. Gas chromatography tandem mass spectrometry was used to develop Mahayograj Guggul fingerprinting profile and to identify mid-polar or nonpolar compounds. Proximate analysis was used to ascertain the functional groups present in Mahayograj Guggul. Ultra high-performance liquid chromatography and gas chromatography tandem mass spectrometry were further employed to authenticate quality reproducibility in the active ingredients of Mahayograj Guggul in six commercial batches. Taken together, these analytical methods provide a scientific basis and reference for quality control evaluation of Mahayograj Guggul and similar traditional broad-spectrum formulations.     

Synthesis and characterization of functional photoactive organic-inorganic block copolymers of poly(methylphenylsilane) and disperse red 1 methacrylate and study of their optical and photophysical properties

Functional photoactive organic-inorganic block copolymers of poly(methylphenylsilane) (PMPS) and disperse red 1 methacrylate (DR1MA) were synthesized in a quartz tube using UV-technique. The synthesized block copolymers were characterized by FTIR, NMR, GPC and thermal analyses and studied for their optical and photoluminescence properties. The weight average and number average molecular weights of such a synthesized block copolymer are 2.47 × 10³ and 2.27 × 10³, respectively. The appearance of two glass transition temperatures indicated the synthesized polymers as block copolymers. The functional organic-inorganic block copolymers exhibited optical absorbance at 276 nm due to aromatic ring associated with both the blocks and at 325 nm due to σ-electron delocalization of Si-Si chain of PMPS block. Also, the optical absorbance appeared at 472 nm is due to combining the contribution of n-π* and first π-π* charge transfer electronic transition of the azobenzene chromophore of DR1MA unit. Two photoemissions were observed at 307 nm and 415 nm when such a polymer was excited at 275 nm. The photoluminescence was also observed at 415 nm when excited by 325 nm. The multi-emission spectra appeared between 510 nm to 580 nm are presumed to be due to exciton coupling between azobenzene chromophore of DR1MA and and Si-Si σ-conjugation of PMPS block. The synthesized copolymers are thermally stable up to 260°C. Such functional photoactive block copolymers may find novel optoelectronic application.     

Repurposing the antibacterial drugs for inhibition of SARS-CoV2-PLpro using molecular docking,MD simulation and binding energy calculation

Molecular Diversity - Papain-like protease (nsp-3; non-structural protein) of novel corona virus is an ideal target for developing drugs as it plays multiple important functions for viral growth...     

Coordination Adaptable Networks: Zirconium(IV) Carboxylates

Vitrimers are 3D “covalent adaptable networks” (CANs) with flow properties thanks to thermally activated associative exchange reactions. This contribution introduces coordination adaptable networks, or CooANs, that are topologically related to metal–organic frameworks with octahedral Zr₆ clusters as secondary building units in a carboxylic acid-functionalized acrylate-methacrylate copolymer matrix. A series of Zr-CooAN-x materials (x=percent of Zr₆ loading relative to maximum capacity) was synthesized with x=5, 10, 15, 20, 25, 50 and 100. The mechanical and rheological investigations demonstrate vitrimer-like properties for x up to 50, the crosslink migration being ensured by carboxylate ligand exchange, with relaxation becoming slower as the Zr₆ content is increased. The flow activation energy of Zr-CooAN-10 is 92.9±3.6 kJ mol⁻¹. Rapid (30 min) hot-press reshaping occurs at temperatures in the 50–100 °C range under a 3-ton pressure and does not significantly alter the material properties.     

Synthesis of organic–inorganic chiral block poly(methylphenylsilane) functional polymers,and study of their optical and chiroptical properties

Polysilanes upon UV irradiation give rise to silyl macroradicals which are capable to initiate radical polymerization. Hence, chiral block functional polysilanes were synthesized by UV irradiation of poly(methylphenylsilane) (PMPS) with a vinyl chiral monomer, (R)‐N‐(1‐phenylethyl)methacrylamide (R‐NPEMAM). The synthesized copolymer samples were characterized by FTIR, NMR, and UV–vis spectroscopy. The number and weight average molecular weights of PMPS and synthesized chiral‐block‐PMPS were measured by GPC analysis. Two glass transition temperatures (T_g) of the synthesized materials clearly indicate the formation of chiral‐block‐PMPS copolymers. SEM analysis also indicated the synthesized organic–inorganic block copolymers. The optical and chiroptical properties of the synthesized materials were studied. The cotton effect is observed not only at 276 nm due to aromatic ring of the chiral monomer units but also at 325 nm which is associated with the Si–Si conjugation of PMPS block of synthesized functional polysilanes. Such tunable chirality may find potential application in optoelectronics. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2016 , 54, 3626–3634     

Ultrasensitive electrochemical detection of nucleic acid based on the isothermal strand-displacement polymerase reaction and enzyme dual amplification

We describe an ultrasensitive electrochemical detection of DNA protocol based on the isothermal strand-displacement polymerase reaction (ISDPR) and enzyme dual amplifications. Target DNA triggered an ISDPR to produce numerous bi-functionalized duplex DNA complexes. Following an immuno-magnetic collection via an immunoreaction between the attached digoxin on the duplex DNA and the anti-digoxin antibody on the magnetic bead, horseradish (HRP) tracers were bound to the duplex DNA through a biotin–streptavidin interaction. The quantification of DNA was realized by square wave voltammetric detection of the enzymatic products with a screen-printed gold electrode. The voltammetric response was proportional to the concentration of DNA in the range of 0.1 fM–0.5 pM, and the limit of detection was estimated to be 0.06 fM. The new protocol showed great promise for simple, cost-effective, and quantitative gene analysis.     

Seven and higher-membered oxygen heterocycles: Metal and non-metal

The investigation of methods for the chemical synthesis is a growing area of interest due to increasing environmental issues. The use of catalysts in organic reactions has gained extensive interest. Metal and nonmetal catalysts provided a new improved alternative to traditional methods in modern synthetic chemistry. The aim of present review is to focus on the applications of metals and nonmetals for the synthesis of seven and higher-membered O-heterocycles.     

Spectral studies of dimeric copper(II) complexes of acid amide derivatives as models for type III copper enzymes

Dimeric (hydrated and anhydrated) complexes of Cu(II) with N,N'-bis(3-carboxy-1-oxo-2-prop-2-enyl)ethylenediamine(BCOPENH(2), A) and N,N'-bis(2-carboxy-1-oxo-phenylenyl)ethylenediamine(BCOPHENH(2), B) have been prepared and characterised by elemental analysis, magnetic susceptibility measurements, EPR, thermal and spectral (IR, UV/Vis) studies. EPR parameters and magnetic behaviour indicates that the complexes are antiferromagnetic in nature and most likely adopt the typical carboxylate cage structure. Interesting amide bonding patterns have been observed and various EPR parameters have been evaluated on the basis of these studies, tentative probable structures of the complexes have been proposed.     

Symmetry structure and phase transitions

We study chiral symmetry structure at finite density and temperature in the presence of external magnetic field and gravity, a situation relevant in the early Universe and in the core of compact stars. We then investigate the dynamical evolution of phase transition in the expanding early Universe and possible formation of quark nuggets and their survival.