Some observations on the automation by flow injection analysis of the spectrophotometric determination of amino acids and proteins witho-phthalaldehyde

Automation by flow injection analysis with Spectrophotometric detection of the determination of total amino acids and proteins witho-phthalaldehyde is not straightforward. The use of spectrophotometry, instead of spectrofluorimetry, and of N-acetyl-L-cysteine, instead of the conventional mercaptoethanol is advantageous because of the lower variability of absorptivities with respect to fluorescence yields, and the larger stability of the derivatives. Under adequate working conditions and with leucine as reference, the procedure can be used for the evaluation of total amino acids. A similar procedure is proposed for the analysis of proteins in a sample. Limits of detection are 1 × 10^–5 M for amino acids, and 1 × 10^–6 M for proteins, respectively.     

Bead injection for surface enhanced Raman spectroscopy: automated on-line monitoring of substrate generation and application in quantitative analysis

The technique of bead injection has been adapted for surface enhanced Raman scattering (SERS) to substantially improve precision, long term stability and sensitivity of SERS detection in analytical chemistry. For this purpose a fully automated flow system comprising a dedicated flow-cell has been developed and tested. With the developed flow-cell, which contains two inlet and two outlet channels, it is possible to retain, perfuse and discharge minute amounts of polymer beads while monitoring all steps by Raman spectroscopy. First, beads carrying cation exchanger moieties were retained in the flow-cell and subsequently perfused with a silver nitrate and a hydroxylamine solution using one inlet of the flow cell. By this sequence homogeneous SERS active silver layers were formed on the beads. The uniformity of the achieved silver layer was studied by secondary electron microscopy. For measurement, the analyte was then introduced from the second inlet channel such that the interaction between the activated SERS beads and analyte occurred in close proximity and within the focus of the laser excitation beam. Due to the complete computer control of all experimental steps, including bead entrapment, SERS layer generation, sample introduction and final bead removal, highly reproducible conditions for SERS were achieved. The method was developed using 9-aminoacridine as a test molecule. Quantitative studies were carried out for 9-aminoacridine and acridine showing linear calibrations from 1-100 nmol l(-1) and 50-1,000 nmol l(-1), respectively, using a sample volume of 200 microl each. Typical relative standard deviations were 4.7% for 9-aminoacrine and 5.8% for acridine.     

Nonuniversality and analytical continuation in moments of directed polymers on hierarchical lattices

We prove the moments of the directed polymer partition function GZ, using an exact position space renormalization group scheme on a hierarchical lattice. After sufficient iteration the characteristic functionf(n)=lnGZⁿ of the probability (Z) converges to a stable limitf ^*(n). For smalln the limiting behavior is independent of the initial distribution, while for largen,f ^*(n) is completely determined by it and is thus nonuniversal. There is a smooth crossover between the two regimes for small effective dimensions, and the nonlinear behavior of the small moments can be used to extract information on the universal scaling properties of the distribution. For large effective dimensions there is a sharp transition between the two regimes, and analytical continuation from integer moments ton0 is not possible. Replica arguments can account for most features of the observed results.     

Intrinsic folding of small peptide chains: spectroscopic evidence for the formation of beta-turns in the gas phase

Laser desorption of model peptides coupled to laser spectroscopic techniques enables the gas-phase observation of genuine secondary structures of biology. Spectroscopic evidence for the formation of beta-turns in gas-phase peptide chains containing glycine and phenylalanine residues establishes the intrinsic stability of these forms and their ability to compete with other stable structures. The precise characterization of local minima on the potential energy surface from IR spectroscopy constitutes an acute assessment for the state-of-the-art quantum mechanical calculations also presented. The observation of different types of beta-turns depending upon the residue order within the sequence is found to be consistent with the residue propensities in beta-turns of proteins, which suggests that the prevalence of glycine in type II and II' turns stems essentially from an energetic origin, already at play under isolated conditions.     

Magic numbers in the mass distribution of the benzene+-argonn ions: evaporation dynamics and cluster structure

The intensity distribution of benzene⁺-Ar_n cluster ions formed by laser ionization of neutral clusters has been investigated: two main intensity anomalies (magic numbers atn=20 and 45) have been observed in the 15–60 size range. The evaporation dynamics of these species in the 2–50 microsecond time window following ionization has been studied using the electrostatic mirror of a reflectron time-of-flight mass spectrometer as a kinetic energy analyser capable to distinguish parent and daughter ions. The magic numbers are interpreted in terms of size dependent evaporation behaviors: beyondn=20, a sudden decrease of the evaporation energy is observed; in then=45–47 size range, the magic number is accounted for by the specific dynamics of then=46 and 47 clusters, in particular the possible loss of two argon atoms forn=47 within the experimental time window. These results and their implications on the cluster structure are discussed in the light of the evaporative ensemble model and compared to the evaporation characteristics of similar species, in particular the neat rare gas clusters.     

Perchlorate analysis using solid-phase extraction cartridges

Perchlorate is a compound of increasing concern as an environmental contaminant and is being regulated at increasingly stringent levels. Reliable methods are needed to consistently analyze perchlorate at low concentration levels. This research investigates the use of solid-phase extraction cartridges as an alternative to large-volume injection loops to achieve low-level (microg/L level) perchlorate quantitation. The method involves commercially available strong anion exchange (SAX) cartridges. Water samples are filtered (100 to 1000 mL) using the cartridge, which removes the perchlorate from the solution by anion exchange. Then, after the desired volume is filtered, the perchlorate is extracted using 4 mL of 1% NaOH. In addition, a cleanup method is developed to remove competing anions (chloride, sulfate, and carbonate) that are often found in environmental samples. Analyses are performed with an ion chromatograph using a 10-microL injection loop, yielding a perchlorate method detection limit (MDL) of 210 microg/L. One-liter volumes of a 2-microg/L perchlorate spiked deionized water solution are filtered with SAX SPE. Following extraction and analysis, an MDL of 0.82 microg/L is obtained, comparable to that found for 1-mL injection loop systems (reported as low as 0.53 microg/L). MDL studies are then conducted on perchlorate-amended groundwater (solution concentration of 70 microg/L) and surface water (solution concentration of 10 microg/L) using a filtration volume of 200 mL. The MDLs are 6.7 microg/L for the groundwater and 2.4 microg/L for the surface water.     

ICP-MS multi-element analysis of wine samples - a comparative study of the methodologies used in two laboratories

A comparison of the performance of the methodologies used in two distinct laboratories (Lab A and Lab B) for multi-element analysis in different wines was carried out. ICP-MS apparatus (quadrupole mass analyzers) of different brands as well as different wine pre-treatments were used. At Lab A, a pre-treatment by UV-irradiation was performed. At Lab B, a micro-concentric nebulizer was used for direct analysis of the wine. Twenty-six elements (Li, V, Co, Ni, Cu, Zn, Ga, As, Rb, Sr, Ba, La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, Lu, and Pb) were measured in common at the two labs in three different wine samples (red and white Bordeaux table wines and Port wine) and the results were compared. The two methodologies provided similar LODs and similar precisions, with RSDs of 0.5-5%, for most of the elements. The recovery percentages were 85-120% at Lab A for the three wines, and 78-119% at Lab B for the Bordeaux wines, validating the accuracy of the methods used. Comparable results were obtained at both labs for ten elements (Li, V, Co, Ni, Cu, Zn, Rb, Sr, Ba, and Pb) in the three selected wines; the differences were lower than 10% in most cases. For REEs, the differences observed were slightly higher, but still in the acceptable range due to the sub-ppb levels involved. The results obtained for As and Ga were not comparable, due to methodological influence. A comparison through linear least-squares adjustment indicated that the results obtained by the two labs were linearly correlated (correlation coefficient =0.997) but statistically different as the slope was slightly, but significantly different from one, for a confidence level of 95% (the intercept was statistically identical to zero in any case). In the future, strictly more identical results can be achieved by using a reference wine sample.     

Homogeneous pyrolysis kinetics of ethyl 3-hydroxy-3-methylbutanoate in the gas phase

The pyrolysis kinetics of ethyl 3-hydroxy-3-methylbutanoate have been examined over the temperature range of 286–330°C and pressure range of 29–108 Torr. In a seasoned vessel and in the presence of the free radical inhibitor cyclohexene or toluene the reaction is homogeneous, unimolecular and obeys a first-order rate law. The elimination products are mainly acetone and ethyl acetate, and very small amounts of ethyl 3-butenoate, acetic acid, ethylene and H₂O. The rate coefficient is expressed by the following equation: log k₁(s^–1)=(12.39±0.46)–(174.5±5.2) kJ mol^–1 (2.303RT)^–1. The mechanism appears to proceed via a six-membered cyclic transition state, where polarization of the (CH₃)C(OH)^+...-CH₂COOCH₂CH₃ bond is rate determining.